RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 DIAPH3Q9NSV4 1193 aa21.16■□□□□ 0.98
ABCF3-217ENST00000489719 FBXO28Q9NVF7 368 aa21.16■□□□□ 0.98
ABCF3-217ENST00000489719 KIAA0100Q14667 2235 aaKnown RBP21.16■□□□□ 0.98
ABCF3-217ENST00000489719 CCDC171Q6TFL3 1326 aa21.15■□□□□ 0.98
ABCF3-217ENST00000489719 RANBP6O60518 1105 aaKnown RBP21.15■□□□□ 0.98
ABCF3-217ENST00000489719 NDUFB10O96000 172 aa21.15■□□□□ 0.98
ABCF3-217ENST00000489719 ERCC3P19447 782 aa21.15■□□□□ 0.98
ABCF3-217ENST00000489719 TRIM32Q13049 653 aa21.15■□□□□ 0.98
ABCF3-217ENST00000489719 PRPF38BQ5VTL8 546 aaKnown RBP21.15■□□□□ 0.98
ABCF3-217ENST00000489719 DPP9Q86TI2 863 aa21.15■□□□□ 0.98
ABCF3-217ENST00000489719 NCAPG2Q86XI2 1143 aa21.15■□□□□ 0.98
ABCF3-217ENST00000489719 APBA2Q99767 749 aa21.15■□□□□ 0.98
ABCF3-217ENST00000489719 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.15■□□□□ 0.989e-6■■■■■ 32.4
ABCF3-217ENST00000489719 INCENPQ9NQS7 918 aa21.15■□□□□ 0.98
ABCF3-217ENST00000489719 PAK6Q9NQU5 681 aaPredicted RBP21.15■□□□□ 0.98
ABCF3-217ENST00000489719 TOMM22Q9NS69 142 aa21.15■□□□□ 0.98
ABCF3-217ENST00000489719 PPP1R9AQ9ULJ8 1098 aa21.15■□□□□ 0.98
ABCF3-217ENST00000489719 SYNPO2Q9UMS6 1093 aa21.15■□□□□ 0.98
ABCF3-217ENST00000489719 ADAMTS5Q9UNA0 930 aa21.15■□□□□ 0.98
ABCF3-217ENST00000489719 CENPFP49454 3210 aa21.15■□□□□ 0.98
ABCF3-217ENST00000489719 MGAMO43451 1857 aa21.14■□□□□ 0.97
ABCF3-217ENST00000489719 SLC25A27O95847 323 aa21.14■□□□□ 0.97
ABCF3-217ENST00000489719 CWC27Q6UX04 472 aaKnown RBP21.14■□□□□ 0.97
ABCF3-217ENST00000489719 ZNF589Q86UQ0 364 aaPredicted RBP21.14■□□□□ 0.97
ABCF3-217ENST00000489719 SHISA4Q96DD7 197 aa21.14■□□□□ 0.97
ABCF3-217ENST00000489719 NUP88Q99567 741 aaPredicted RBP21.14■□□□□ 0.97
ABCF3-217ENST00000489719 CTDP1Q9Y5B0 961 aaPredicted RBP21.14■□□□□ 0.97
ABCF3-217ENST00000489719 VWA5AO00534 786 aa21.13■□□□□ 0.97
ABCF3-217ENST00000489719 PRKAR2AP13861 404 aaKnown RBP21.13■□□□□ 0.97
ABCF3-217ENST00000489719 GRB14Q14449 540 aa21.13■□□□□ 0.97
ABCF3-217ENST00000489719 TMEM132BQ14DG7 1078 aa21.13■□□□□ 0.97
ABCF3-217ENST00000489719 CCL14Q16627 93 aa21.13■□□□□ 0.97
ABCF3-217ENST00000489719 MFSD14CQ5VZR4 134 aa21.13■□□□□ 0.97
ABCF3-217ENST00000489719 SLFN13Q68D06 897 aa21.13■□□□□ 0.97
ABCF3-217ENST00000489719 PRPF38AQ8NAV1 312 aaKnown RBP21.13■□□□□ 0.97
ABCF3-217ENST00000489719 SLF1Q9BQI6 1058 aa21.13■□□□□ 0.97
ABCF3-217ENST00000489719 SLC5A4Q9NY91 659 aa21.13■□□□□ 0.97
ABCF3-217ENST00000489719 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.13■□□□□ 0.97
ABCF3-217ENST00000489719 STAT3P40763 770 aa21.12■□□□□ 0.97
ABCF3-217ENST00000489719 CACNB2Q08289 660 aaPredicted RBP21.12■□□□□ 0.97
ABCF3-217ENST00000489719 RRP12Q5JTH9 1297 aaKnown RBP21.12■□□□□ 0.97
ABCF3-217ENST00000489719 LRRC47Q8N1G4 583 aaKnown RBP21.12■□□□□ 0.97
ABCF3-217ENST00000489719 GMCL1P1Q8NEA9 526 aa21.12■□□□□ 0.97
ABCF3-217ENST00000489719 ISY1Q9ULR0 285 aaKnown RBP21.12■□□□□ 0.97
ABCF3-217ENST00000489719 STX8Q9UNK0 236 aa21.12■□□□□ 0.97
ABCF3-217ENST00000489719 ORC4O43929 436 aa21.11■□□□□ 0.97
ABCF3-217ENST00000489719 ZBED4O75132 1171 aa21.11■□□□□ 0.97
ABCF3-217ENST00000489719 FARP2O94887 1054 aaPredicted RBP21.11■□□□□ 0.97
ABCF3-217ENST00000489719 HOXC6P09630 235 aa21.11■□□□□ 0.97
ABCF3-217ENST00000489719 FCER1AP12319 257 aa21.11■□□□□ 0.97
ABCF3-217ENST00000489719 ADORA2AP29274 412 aa21.11■□□□□ 0.97
ABCF3-217ENST00000489719 MAP3K21Q5TCX8 1036 aa21.11■□□□□ 0.97
ABCF3-217ENST00000489719 DPF3Q92784 378 aa21.11■□□□□ 0.97
ABCF3-217ENST00000489719 FEM1BQ9UK73 627 aa21.11■□□□□ 0.97
ABCF3-217ENST00000489719 TNRC18O15417 2968 aaPredicted RBP21.1■□□□□ 0.97
ABCF3-217ENST00000489719 FGRP09769 529 aa21.1■□□□□ 0.97
ABCF3-217ENST00000489719 BMP3P12645 472 aa21.1■□□□□ 0.97
ABCF3-217ENST00000489719 PDE4AP27815 886 aa21.1■□□□□ 0.97
ABCF3-217ENST00000489719 COPB2P35606 906 aa21.1■□□□□ 0.97
ABCF3-217ENST00000489719 HAND2P61296 217 aa21.1■□□□□ 0.97
ABCF3-217ENST00000489719 MFSD6Q6ZSS7 791 aa21.1■□□□□ 0.97
ABCF3-217ENST00000489719 RIOX2Q8IUF8 465 aa21.1■□□□□ 0.97
ABCF3-217ENST00000489719 ABRAQ8N0Z2 381 aa21.1■□□□□ 0.97
ABCF3-217ENST00000489719 KIFC2Q96AC6 838 aa21.1■□□□□ 0.97
ABCF3-217ENST00000489719 HTATIP2Q9BUP3 242 aa21.1■□□□□ 0.97
ABCF3-217ENST00000489719 CRISPLD2Q9H0B8 497 aa21.1■□□□□ 0.97
ABCF3-217ENST00000489719 PLIN4Q96Q06 1357 aa21.1■□□□□ 0.97
ABCF3-217ENST00000489719 ZNF213O14771 459 aa21.09■□□□□ 0.97
ABCF3-217ENST00000489719 NPLOC4Q8TAT6 608 aa21.09■□□□□ 0.97
ABCF3-217ENST00000489719 IL17RBQ9NRM6 502 aa21.09■□□□□ 0.97
ABCF3-217ENST00000489719 ZMYM6O95789 1325 aa21.08■□□□□ 0.97
ABCF3-217ENST00000489719 PCP11498 1178 aaKnown RBP21.08■□□□□ 0.97
ABCF3-217ENST00000489719 SLC1A4P43007 532 aa21.08■□□□□ 0.97
ABCF3-217ENST00000489719 AKNAD1Q5T1N1 836 aa21.08■□□□□ 0.97
ABCF3-217ENST00000489719 TTC22Q5TAA0 569 aa21.08■□□□□ 0.97
ABCF3-217ENST00000489719 DOCK3Q8IZD9 2030 aa21.08■□□□□ 0.97
ABCF3-217ENST00000489719 CHURC1Q8WUH1 139 aa21.08■□□□□ 0.97
ABCF3-217ENST00000489719 MMP19Q99542 508 aa21.08■□□□□ 0.97
ABCF3-217ENST00000489719 RNF41Q9H4P4 317 aaPredicted RBP21.08■□□□□ 0.97
ABCF3-217ENST00000489719 FLRT1Q9NZU1 646 aa21.08■□□□□ 0.97
ABCF3-217ENST00000489719 TACC3Q9Y6A5 838 aa21.08■□□□□ 0.97
ABCF3-217ENST00000489719 TMEM232C9JQI7 657 aa21.07■□□□□ 0.96
ABCF3-217ENST00000489719 NMT2O60551 498 aa21.07■□□□□ 0.96
ABCF3-217ENST00000489719 MCCP23508 829 aa21.07■□□□□ 0.96
ABCF3-217ENST00000489719 SLC4A3P48751 1232 aa21.07■□□□□ 0.96
ABCF3-217ENST00000489719 IKQ13123 557 aaPredicted RBP21.07■□□□□ 0.96
ABCF3-217ENST00000489719 KCTD2Q14681 263 aa21.07■□□□□ 0.96
ABCF3-217ENST00000489719 UBE2Q1Q7Z7E8 422 aa21.07■□□□□ 0.96
ABCF3-217ENST00000489719 CPXCR1Q8N123 301 aa21.07■□□□□ 0.96
ABCF3-217ENST00000489719 ANKLE1Q8NAG6 615 aa21.07■□□□□ 0.96
ABCF3-217ENST00000489719 REPS2Q8NFH8 660 aa21.07■□□□□ 0.96
ABCF3-217ENST00000489719 CHMP4CQ96CF2 233 aa21.07■□□□□ 0.96
ABCF3-217ENST00000489719 TEX13BQ9BXU2 312 aa21.07■□□□□ 0.96
ABCF3-217ENST00000489719 CTNNA3Q9UI47 895 aa21.07■□□□□ 0.96
ABCF3-217ENST00000489719 ZNF214Q9UL59 606 aaPredicted RBP21.07■□□□□ 0.96
ABCF3-217ENST00000489719 COBLO75128 1261 aa21.06■□□□□ 0.96
ABCF3-217ENST00000489719 FDX1P10109 184 aa21.06■□□□□ 0.96
ABCF3-217ENST00000489719 CNGA1P29973 690 aa21.06■□□□□ 0.96
ABCF3-217ENST00000489719 CCND3P30281 292 aaPredicted RBP21.06■□□□□ 0.96
ABCF3-217ENST00000489719 CYP2C19P33261 490 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms