RNA–Protein interactions for RNA: ENST00000489638.5

LTA-216, Transcript of lymphotoxin alpha, humanhuman

TSL 5

Gene LTA, Length 1,377 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-216ENST00000489638 TRIM43Q96BQ3 446 aaPredicted RBP15.64■□□□□ 0.09
LTA-216ENST00000489638 CDX2Q99626 313 aaPredicted RBP15.64■□□□□ 0.09
LTA-216ENST00000489638 NRBP1Q9UHY1 535 aa15.64■□□□□ 0.09
LTA-216ENST00000489638 ADAMTS5Q9UNA0 930 aa15.64■□□□□ 0.09
LTA-216ENST00000489638 PHF24Q9UPV7 400 aa15.64■□□□□ 0.09
LTA-216ENST00000489638 CDK8P49336 464 aa15.63■□□□□ 0.09
LTA-216ENST00000489638 C12orf60Q5U649 245 aa15.63■□□□□ 0.09
LTA-216ENST00000489638 SAMD1Q6SPF0 538 aaPredicted RBP15.63■□□□□ 0.09
LTA-216ENST00000489638 CCDC17Q96LX7 622 aa15.63■□□□□ 0.09
LTA-216ENST00000489638 ATP8A2Q9NTI2 1148 aa15.63■□□□□ 0.09
LTA-216ENST00000489638 FBXO28Q9NVF7 368 aa15.63■□□□□ 0.09
LTA-216ENST00000489638 PAG1Q9NWQ8 432 aa15.63■□□□□ 0.09
LTA-216ENST00000489638 BAZ2AQ9UIF9 1905 aaKnown RBP15.63■□□□□ 0.09
LTA-216ENST00000489638 COL11A1P12107 1806 aaPredicted RBP15.63■□□□□ 0.09
LTA-216ENST00000489638 SLC25A27O95847 323 aa15.62■□□□□ 0.09
LTA-216ENST00000489638 CHGBP05060 677 aa15.62■□□□□ 0.09
LTA-216ENST00000489638 PGK2P07205 417 aa15.62■□□□□ 0.09
LTA-216ENST00000489638 EEF2P13639 858 aaKnown RBP15.62■□□□□ 0.09
LTA-216ENST00000489638 TLE2Q04725 743 aa15.62■□□□□ 0.09
LTA-216ENST00000489638 C16orf86Q6ZW13 317 aa15.62■□□□□ 0.09
LTA-216ENST00000489638 RIOX2Q8IUF8 465 aa15.62■□□□□ 0.09
LTA-216ENST00000489638 SIRT2Q8IXJ6 389 aa15.62■□□□□ 0.09
LTA-216ENST00000489638 MMP19Q99542 508 aa15.62■□□□□ 0.09
LTA-216ENST00000489638 XPNPEP3Q9NQH7 507 aa15.62■□□□□ 0.09
LTA-216ENST00000489638 USP17L12C9JPN9 530 aa15.62■□□□□ 0.09
LTA-216ENST00000489638 USP17L21D6R901 530 aa15.62■□□□□ 0.09
LTA-216ENST00000489638 RARBP10826 455 aa15.62■□□□□ 0.09
LTA-216ENST00000489638 TAL1P17542 331 aaPredicted RBP15.62■□□□□ 0.09
LTA-216ENST00000489638 ITGB8P26012 769 aa15.62■□□□□ 0.09
LTA-216ENST00000489638 SMAD3P84022 425 aaKnown RBP15.62■□□□□ 0.09
LTA-216ENST00000489638 ZNF792Q3KQV3 632 aa15.62■□□□□ 0.09
LTA-216ENST00000489638 REPS2Q8NFH8 660 aa15.62■□□□□ 0.09
LTA-216ENST00000489638 TINF2Q9BSI4 451 aa15.62■□□□□ 0.09
LTA-216ENST00000489638 BCL11AQ9H165 835 aa15.62■□□□□ 0.09
LTA-216ENST00000489638 TTYH1Q9H313 450 aaPredicted RBP15.62■□□□□ 0.09
LTA-216ENST00000489638 BOLA2Q9H3K6 86 aa15.62■□□□□ 0.09
LTA-216ENST00000489638 SEMA6BQ9H3T3 888 aa15.62■□□□□ 0.09
LTA-216ENST00000489638 ZNF214Q9UL59 606 aaPredicted RBP15.62■□□□□ 0.09
LTA-216ENST00000489638 ZBED9Q6R2W3 1325 aa15.61■□□□□ 0.09
LTA-216ENST00000489638 VWA5AO00534 786 aa15.61■□□□□ 0.09
LTA-216ENST00000489638 PGK1P00558 417 aa15.61■□□□□ 0.09
LTA-216ENST00000489638 KCTD2Q14681 263 aa15.61■□□□□ 0.09
LTA-216ENST00000489638 RPAP2Q8IXW5 612 aaPredicted RBP15.61■□□□□ 0.09
LTA-216ENST00000489638 LENG1Q96BZ8 264 aaPredicted RBP15.61■□□□□ 0.09
LTA-216ENST00000489638 HAUS7Q99871 368 aa15.61■□□□□ 0.09
LTA-216ENST00000489638 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.61■□□□□ 0.09
LTA-216ENST00000489638 KANSL2Q9H9L4 492 aa15.61■□□□□ 0.09
LTA-216ENST00000489638 PPP1R9AQ9ULJ8 1098 aa15.61■□□□□ 0.09
LTA-216ENST00000489638 DIS3Q9Y2L1 958 aaKnown RBP15.61■□□□□ 0.09
LTA-216ENST00000489638 A0A1W2PQ45 241 aaPredicted RBP15.6■□□□□ 0.09
LTA-216ENST00000489638 A0A1W2PQY0 241 aa15.6■□□□□ 0.09
LTA-216ENST00000489638 HMMRO75330 724 aa15.6■□□□□ 0.09
LTA-216ENST00000489638 CLTBP09497 229 aa15.6■□□□□ 0.09
LTA-216ENST00000489638 ZNF865P0CJ78 1059 aaPredicted RBP15.6■□□□□ 0.09
LTA-216ENST00000489638 ATP5JP18859 108 aa15.6■□□□□ 0.09
LTA-216ENST00000489638 STAT3P40763 770 aa15.6■□□□□ 0.09
LTA-216ENST00000489638 EPHB4P54760 987 aa15.6■□□□□ 0.09
LTA-216ENST00000489638 UBE3CQ15386 1083 aa15.6■□□□□ 0.09
LTA-216ENST00000489638 RNF180Q86T96 592 aa15.6■□□□□ 0.09
LTA-216ENST00000489638 AMOTL1Q8IY63 956 aa15.6■□□□□ 0.09
LTA-216ENST00000489638 MAFAQ8NHW3 353 aaPredicted RBP15.6■□□□□ 0.09
LTA-216ENST00000489638 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.6■□□□□ 0.09
LTA-216ENST00000489638 GREB1LQ9C091 1923 aaPredicted RBP15.59■□□□□ 0.09
LTA-216ENST00000489638 PLXNA1Q9UIW2 1896 aa15.59■□□□□ 0.09
LTA-216ENST00000489638 ZNFX1Q9P2E3 1918 aaKnown RBP15.59■□□□□ 0.09
LTA-216ENST00000489638 KIAA0355O15063 1070 aa15.59■□□□□ 0.09
LTA-216ENST00000489638 RAB11FIP3O75154 756 aa15.59■□□□□ 0.09
LTA-216ENST00000489638 ADAMTS4O75173 837 aa15.59■□□□□ 0.09
LTA-216ENST00000489638 AKR1A1P14550 325 aa15.59■□□□□ 0.09
LTA-216ENST00000489638 FAM83BQ5T0W9 1011 aa15.59■□□□□ 0.09
LTA-216ENST00000489638 CTR9Q6PD62 1173 aa15.59■□□□□ 0.09
LTA-216ENST00000489638 MYLIPQ8WY64 445 aa15.59■□□□□ 0.09
LTA-216ENST00000489638 GOPCQ9HD26 462 aa15.59■□□□□ 0.09
LTA-216ENST00000489638 ZBTB40Q9NUA8 1239 aa15.59■□□□□ 0.09
LTA-216ENST00000489638 TACC3Q9Y6A5 838 aa15.59■□□□□ 0.09
LTA-216ENST00000489638 SLC4A4Q9Y6R1 1079 aa15.59■□□□□ 0.09
LTA-216ENST00000489638 SMCHD1A6NHR9 2005 aa15.58■□□□□ 0.09
LTA-216ENST00000489638 PQBP1O60828 265 aaKnown RBP15.58■□□□□ 0.08
LTA-216ENST00000489638 COPB2P35606 906 aa15.58■□□□□ 0.08
LTA-216ENST00000489638 DDRGK1Q96HY6 314 aa15.58■□□□□ 0.08
LTA-216ENST00000489638 RNPC3Q96LT9 517 aaKnown RBP15.58■□□□□ 0.08
LTA-216ENST00000489638 MYH7P12883 1935 aa15.58■□□□□ 0.08
LTA-216ENST00000489638 SYNRGQ9UMZ2 1314 aa15.57■□□□□ 0.08
LTA-216ENST00000489638 NUP88Q99567 741 aaPredicted RBP15.57■□□□□ 0.08
LTA-216ENST00000489638 TEX13BQ9BXU2 312 aa15.57■□□□□ 0.08
LTA-216ENST00000489638 PUS7LQ9H0K6 701 aaKnown RBP15.57■□□□□ 0.08
LTA-216ENST00000489638 ARPP21Q9UBL0 812 aaPredicted RBP15.57■□□□□ 0.08
LTA-216ENST00000489638 CNPY2Q9Y2B0 182 aa15.57■□□□□ 0.08
LTA-216ENST00000489638 COG6Q9Y2V7 657 aa15.57■□□□□ 0.08
LTA-216ENST00000489638 CDH23Q9H251 3354 aa15.56■□□□□ 0.08
LTA-216ENST00000489638 TMEM265A0A087WTH1 108 aa15.56■□□□□ 0.08
LTA-216ENST00000489638 RAD21O60216 631 aa15.56■□□□□ 0.08
LTA-216ENST00000489638 MS4A1P11836 297 aa15.56■□□□□ 0.08
LTA-216ENST00000489638 RAG1P15918 1043 aa15.56■□□□□ 0.08
LTA-216ENST00000489638 ANKRD33Q7Z3H0 272 aa15.56■□□□□ 0.08
LTA-216ENST00000489638 MSL3Q8N5Y2 521 aaKnown RBP15.56■□□□□ 0.08
LTA-216ENST00000489638 SLF1Q9BQI6 1058 aa15.56■□□□□ 0.08
LTA-216ENST00000489638 DDX19BQ9UMR2 479 aa15.56■□□□□ 0.08
LTA-216ENST00000489638 EYSQ5T1H1 3165 aa15.56■□□□□ 0.08
LTA-216ENST00000489638 SYNGAP1Q96PV0 1343 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms