RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 USP6NLQ92738 828 aa16.02■□□□□ 0.16
LMO4-203ENST00000489303 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.02■□□□□ 0.16
LMO4-203ENST00000489303 CLIP2Q9UDT6 1046 aa16.02■□□□□ 0.16
LMO4-203ENST00000489303 RPTORQ8N122 1335 aa16.01■□□□□ 0.15
LMO4-203ENST00000489303 TSPY2A6NKD2 308 aa16.01■□□□□ 0.15
LMO4-203ENST00000489303 TTLL1O95922 423 aa16.01■□□□□ 0.15
LMO4-203ENST00000489303 HSPD1P10809 573 aaKnown RBP16.01■□□□□ 0.15
LMO4-203ENST00000489303 PRKAR2AP13861 404 aaKnown RBP16.01■□□□□ 0.15
LMO4-203ENST00000489303 DSG3P32926 999 aa16.01■□□□□ 0.15
LMO4-203ENST00000489303 TFAP4Q01664 338 aa16.01■□□□□ 0.15
LMO4-203ENST00000489303 CTDSPL2Q05D32 466 aa16.01■□□□□ 0.15
LMO4-203ENST00000489303 SAMD1Q6SPF0 538 aaPredicted RBP16.01■□□□□ 0.15
LMO4-203ENST00000489303 CWC27Q6UX04 472 aaKnown RBP16.01■□□□□ 0.15
LMO4-203ENST00000489303 GPR142Q7Z601 462 aa16.01■□□□□ 0.15
LMO4-203ENST00000489303 HMX1Q9NP08 348 aaPredicted RBP16.01■□□□□ 0.15
LMO4-203ENST00000489303 TOMM22Q9NS69 142 aa16.01■□□□□ 0.15
LMO4-203ENST00000489303 ANAPC4Q9UJX5 808 aa16.01■□□□□ 0.15
LMO4-203ENST00000489303 SYNPO2Q9UMS6 1093 aa16.01■□□□□ 0.15
LMO4-203ENST00000489303 IVNS1ABPQ9Y6Y0 642 aa16.01■□□□□ 0.15
LMO4-203ENST00000489303 MYH8P13535 1937 aa16■□□□□ 0.15
LMO4-203ENST00000489303 FOXP2O15409 715 aa16■□□□□ 0.15
LMO4-203ENST00000489303 EVI5O60447 810 aa16■□□□□ 0.15
LMO4-203ENST00000489303 FGAP02671 866 aa16■□□□□ 0.15
LMO4-203ENST00000489303 PDE4AP27815 886 aa16■□□□□ 0.15
LMO4-203ENST00000489303 CCND3P30281 292 aaPredicted RBP16■□□□□ 0.15
LMO4-203ENST00000489303 RGS2P41220 211 aa16■□□□□ 0.15
LMO4-203ENST00000489303 FAM47AQ5JRC9 791 aa16■□□□□ 0.15
LMO4-203ENST00000489303 KIAA1755Q5JYT7 1200 aa16■□□□□ 0.15
LMO4-203ENST00000489303 MORN1Q5T089 497 aa16■□□□□ 0.15
LMO4-203ENST00000489303 TTC22Q5TAA0 569 aa16■□□□□ 0.15
LMO4-203ENST00000489303 MAP3K21Q5TCX8 1036 aa16■□□□□ 0.15
LMO4-203ENST00000489303 ZNF589Q86UQ0 364 aaPredicted RBP16■□□□□ 0.15
LMO4-203ENST00000489303 TRMT44Q8IYL2 757 aaKnown RBP16■□□□□ 0.15
LMO4-203ENST00000489303 CEP95Q96GE4 821 aa16■□□□□ 0.15
LMO4-203ENST00000489303 MTMR4Q9NYA4 1195 aa16■□□□□ 0.15
LMO4-203ENST00000489303 BTBD7Q9P203 1132 aa16■□□□□ 0.15
LMO4-203ENST00000489303 ZMYM6O95789 1325 aa15.99■□□□□ 0.15
LMO4-203ENST00000489303 IGKV6D-41A0A0C4DH26 115 aa15.99■□□□□ 0.15
LMO4-203ENST00000489303 F5H6K3 240 aa15.99■□□□□ 0.15
LMO4-203ENST00000489303 SOX1O00570 391 aaPredicted RBP15.99■□□□□ 0.15
LMO4-203ENST00000489303 RANBP6O60518 1105 aaKnown RBP15.99■□□□□ 0.15
LMO4-203ENST00000489303 KLRC3Q07444 240 aa15.99■□□□□ 0.15
LMO4-203ENST00000489303 CACNB2Q08289 660 aaPredicted RBP15.99■□□□□ 0.15
LMO4-203ENST00000489303 PLS1Q14651 629 aa15.99■□□□□ 0.15
LMO4-203ENST00000489303 FAM83BQ5T0W9 1011 aa15.99■□□□□ 0.15
LMO4-203ENST00000489303 MKL1Q969V6 931 aa15.99■□□□□ 0.15
LMO4-203ENST00000489303 FLRT1Q9NZU1 646 aa15.99■□□□□ 0.15
LMO4-203ENST00000489303 ZMYND8Q9ULU4 1186 aaPredicted RBP15.99■□□□□ 0.15
LMO4-203ENST00000489303 PLIN4Q96Q06 1357 aa15.99■□□□□ 0.15
LMO4-203ENST00000489303 XRCC5P13010 732 aaKnown RBP15.98■□□□□ 0.15
LMO4-203ENST00000489303 NECAB2Q7Z6G3 386 aa15.98■□□□□ 0.15
LMO4-203ENST00000489303 C7orf61Q8IZ16 206 aa15.98■□□□□ 0.15
LMO4-203ENST00000489303 ATG4CQ96DT6 458 aa15.98■□□□□ 0.15
LMO4-203ENST00000489303 SPATC1LQ9H0A9 340 aa15.98■□□□□ 0.15
LMO4-203ENST00000489303 RNF41Q9H4P4 317 aaPredicted RBP15.98■□□□□ 0.15
LMO4-203ENST00000489303 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.98■□□□□ 0.15
LMO4-203ENST00000489303 CTDP1Q9Y5B0 961 aaPredicted RBP15.98■□□□□ 0.15
LMO4-203ENST00000489303 NR2E3Q9Y5X4 410 aa15.98■□□□□ 0.15
LMO4-203ENST00000489303 PFASO15067 1338 aa15.97■□□□□ 0.15
LMO4-203ENST00000489303 SLC15A5A6NIM6 579 aa15.97■□□□□ 0.15
LMO4-203ENST00000489303 ZNF213O14771 459 aa15.97■□□□□ 0.15
LMO4-203ENST00000489303 ORC4O43929 436 aa15.97■□□□□ 0.15
LMO4-203ENST00000489303 NDUFB10O96000 172 aa15.97■□□□□ 0.15
LMO4-203ENST00000489303 PCP11498 1178 aaKnown RBP15.97■□□□□ 0.15
LMO4-203ENST00000489303 ZKSCAN1P17029 563 aaPredicted RBP15.97■□□□□ 0.15
LMO4-203ENST00000489303 SYN1P17600 705 aa15.97■□□□□ 0.15
LMO4-203ENST00000489303 RRP12Q5JTH9 1297 aaKnown RBP15.97■□□□□ 0.15
LMO4-203ENST00000489303 MFSD6Q6ZSS7 791 aa15.97■□□□□ 0.15
LMO4-203ENST00000489303 SHCBP1Q8NEM2 672 aa15.97■□□□□ 0.15
LMO4-203ENST00000489303 RUFY2Q8WXA3 655 aa15.97■□□□□ 0.15
LMO4-203ENST00000489303 APBA2Q99767 749 aa15.97■□□□□ 0.15
LMO4-203ENST00000489303 CTNNA3Q9UI47 895 aa15.97■□□□□ 0.15
LMO4-203ENST00000489303 OGDHLQ9ULD0 1010 aa15.97■□□□□ 0.15
LMO4-203ENST00000489303 PPP1R9AQ9ULJ8 1098 aa15.97■□□□□ 0.15
LMO4-203ENST00000489303 ISY1Q9ULR0 285 aaKnown RBP15.97■□□□□ 0.15
LMO4-203ENST00000489303 STX8Q9UNK0 236 aa15.97■□□□□ 0.15
LMO4-203ENST00000489303 STRNO43815 780 aa15.96■□□□□ 0.15
LMO4-203ENST00000489303 SLC25A27O95847 323 aa15.96■□□□□ 0.15
LMO4-203ENST00000489303 CAPN2P17655 700 aa15.96■□□□□ 0.15
LMO4-203ENST00000489303 PTPREP23469 700 aa15.96■□□□□ 0.15
LMO4-203ENST00000489303 HAND2P61296 217 aa15.96■□□□□ 0.15
LMO4-203ENST00000489303 MAP2K5Q13163 448 aa15.96■□□□□ 0.15
LMO4-203ENST00000489303 SLFN13Q68D06 897 aa15.96■□□□□ 0.15
LMO4-203ENST00000489303 LHX8Q68G74 356 aa15.96■□□□□ 0.15
LMO4-203ENST00000489303 NCAPG2Q86XI2 1143 aa15.96■□□□□ 0.15
LMO4-203ENST00000489303 LRRC47Q8N1G4 583 aaKnown RBP15.96■□□□□ 0.15
LMO4-203ENST00000489303 GMCL1P1Q8NEA9 526 aa15.96■□□□□ 0.15
LMO4-203ENST00000489303 SLF1Q9BQI6 1058 aa15.96■□□□□ 0.15
LMO4-203ENST00000489303 MOV10L1Q9BXT6 1211 aaKnown RBP15.96■□□□□ 0.15
LMO4-203ENST00000489303 MROH8Q9H579 483 aa15.96■□□□□ 0.15
LMO4-203ENST00000489303 LAMA3Q16787 3333 aa15.95■□□□□ 0.14
LMO4-203ENST00000489303 FGRP09769 529 aa15.95■□□□□ 0.14
LMO4-203ENST00000489303 GSPT1P15170 499 aaKnown RBP15.95■□□□□ 0.14
LMO4-203ENST00000489303 ERCC3P19447 782 aa15.95■□□□□ 0.14
LMO4-203ENST00000489303 COPB2P35606 906 aa15.95■□□□□ 0.14
LMO4-203ENST00000489303 NT5C2P49902 561 aa15.95■□□□□ 0.14
LMO4-203ENST00000489303 AKNAD1Q5T1N1 836 aa15.95■□□□□ 0.14
LMO4-203ENST00000489303 CENPQQ7L2Z9 268 aaPredicted RBP15.95■□□□□ 0.14
LMO4-203ENST00000489303 PRPF38AQ8NAV1 312 aaKnown RBP15.95■□□□□ 0.14
LMO4-203ENST00000489303 NPLOC4Q8TAT6 608 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms