RNA–Protein interactions for RNA: ENST00000488632.1

LBR-208, Transcript of lamin B receptor, human

TSL 3

Gene LBR, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LBR-208	ENST00000488632	CGNL1	Q0VF96	1302 aa		3.12	□□□□□ -1.91
LBR-208	ENST00000488632	MYBBP1A	Q9BQG0	1328 aa	Known RBP	3.12	□□□□□ -1.91
LBR-208	ENST00000488632	MED1	Q15648	1581 aa	Predicted RBP	3.12	□□□□□ -1.91
LBR-208	ENST00000488632	BRD4	O60885	1362 aa	Predicted RBP	3.12	□□□□□ -1.91
LBR-208	ENST00000488632	USP6	P35125	1406 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	NCOA3	Q9Y6Q9	1424 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	PLCH1	Q4KWH8	1693 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	CAMTA1	Q9Y6Y1	1673 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	FAM95C	A0A1B0GW59	222 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	SOX1	O00570	391 aa	Predicted RBP	3.11	□□□□□ -1.91
LBR-208	ENST00000488632	EREG	O14944	169 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	DLGAP3	O95886	979 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	ESRRA	P11474	423 aa	Predicted RBP	3.11	□□□□□ -1.91
LBR-208	ENST00000488632	ADH5	P11766	374 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	ITGB5	P18084	799 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	JAG1	P78504	1218 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	FZD5	Q13467	585 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	GRM2	Q14416	872 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	RALBP1	Q15311	655 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	OGFOD2	Q6N063	350 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	PRPF40B	Q6NWY9	871 aa	Known RBP	3.11	□□□□□ -1.91
LBR-208	ENST00000488632	PI16	Q6UXB8	463 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	ERMP1	Q7Z2K6	904 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	ZAR1	Q86SH2	424 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	NOP9	Q86U38	636 aa	Known RBP	3.11	□□□□□ -1.91
LBR-208	ENST00000488632	RELL1	Q8IUW5	271 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	EZH1	Q92800	747 aa	Predicted RBP	3.11	□□□□□ -1.91
LBR-208	ENST00000488632	RSRP1	Q9BUV0	290 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	YIPF2	Q9BWQ6	316 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	CDK19	Q9BWU1	502 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	KRTAP4-7	Q9BYR0	210 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	NRSN2	Q9GZP1	204 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	EHD4	Q9H223	541 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	PRR36	Q9H6K5	1346 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	LTBP4	Q8N2S1	1624 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	COL22A1	Q8NFW1	1626 aa	Predicted RBP	3.11	□□□□□ -1.91
LBR-208	ENST00000488632	MSH6	P52701	1360 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	TMEM94	Q12767	1356 aa		3.11	□□□□□ -1.91
LBR-208	ENST00000488632	MST1R	Q04912	1400 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	CPSF1	Q10570	1443 aa	Known RBP	3.1	□□□□□ -1.91
LBR-208	ENST00000488632	CDK12	Q9NYV4	1490 aa	Predicted RBP	3.1	□□□□□ -1.91
LBR-208	ENST00000488632	COL18A1	P39060	1754 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	SCN11A	Q9UI33	1791 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	SLIT3	O75094	1523 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	ABCC6	O95255	1503 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632		A0A1W2PP55	124 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	EIF4EBP3	O60516	100 aa	Predicted RBP	3.1	□□□□□ -1.91
LBR-208	ENST00000488632	POLR3D	P05423	398 aa	Predicted RBP	3.1	□□□□□ -1.91
LBR-208	ENST00000488632	DNAJA1	P31689	397 aa	Known RBP	3.1	□□□□□ -1.91
LBR-208	ENST00000488632	GTF2F1	P35269	517 aa	Known RBP eCLIP	3.1	□□□□□ -1.91
LBR-208	ENST00000488632	GJA8	P48165	433 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	CNGB1	Q14028	1251 aa	Predicted RBP	3.1	□□□□□ -1.91
LBR-208	ENST00000488632	NFKBIB	Q15653	356 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	ZNF394	Q53GI3	561 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	CC2D1B	Q5T0F9	858 aa	Known RBP	3.1	□□□□□ -1.91
LBR-208	ENST00000488632	MEI1	Q5TIA1	1274 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	CDPF1	Q6NVV7	123 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	SV2B	Q7L1I2	683 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	SHISA5	Q8N114	240 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	POU5F2	Q8N7G0	328 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	C12orf50	Q8NA57	414 aa	Predicted RBP	3.1	□□□□□ -1.91
LBR-208	ENST00000488632	FBLIM1	Q8WUP2	373 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	GATA6	Q92908	595 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	SEC16B	Q96JE7	1060 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	TBC1D32	Q96NH3	1257 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	CEP44	Q9C0F1	390 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	SLC12A5	Q9H2X9	1139 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	LATS2	Q9NRM7	1088 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	BSDC1	Q9NW68	430 aa	Predicted RBP	3.1	□□□□□ -1.91
LBR-208	ENST00000488632	TTF2	Q9UNY4	1162 aa	Known RBP	3.1	□□□□□ -1.91
LBR-208	ENST00000488632	AHDC1	Q5TGY3	1603 aa	Predicted RBP	3.1	□□□□□ -1.91
LBR-208	ENST00000488632	LMO7	Q8WWI1	1683 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	POLR3A	O14802	1390 aa	Predicted RBP	3.1	□□□□□ -1.91
LBR-208	ENST00000488632	PKD1L3	Q7Z443	1732 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	NWD2	Q9ULI1	1742 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	SIPA1L3	O60292	1781 aa	Predicted RBP	3.1	□□□□□ -1.91
LBR-208	ENST00000488632	COL14A1	Q05707	1796 aa	Known RBP	3.1	□□□□□ -1.91
LBR-208	ENST00000488632	OVOS2	A0A0J9YW53	1432 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	OVOS2	Q6IE36	1432 aa		3.1	□□□□□ -1.91
LBR-208	ENST00000488632	SMG6	Q86US8	1419 aa	Known RBP	3.1	□□□□□ -1.91
LBR-208	ENST00000488632	COL3A1	P02461	1466 aa	Predicted RBP	3.09	□□□□□ -1.91
LBR-208	ENST00000488632	IQSEC2	Q5JU85	1478 aa		3.09	□□□□□ -1.91
LBR-208	ENST00000488632	C1orf167	Q5SNV9	1468 aa		3.09	□□□□□ -1.91
LBR-208	ENST00000488632	NFAT5	O94916	1531 aa		3.09	□□□□□ -1.91
LBR-208	ENST00000488632	COL16A1	Q07092	1604 aa	Predicted RBP	3.09	□□□□□ -1.91
LBR-208	ENST00000488632	TMEM238L	A0A1B0GVL6	79 aa		3.09	□□□□□ -1.91
LBR-208	ENST00000488632	FAM170B	A6NMN3	283 aa		3.09	□□□□□ -1.91
LBR-208	ENST00000488632	CYP26A1	O43174	497 aa		3.09	□□□□□ -1.91
LBR-208	ENST00000488632	CENPB	P07199	599 aa	Predicted RBP	3.09	□□□□□ -1.91
LBR-208	ENST00000488632	DRD2	P14416	443 aa		3.09	□□□□□ -1.91
LBR-208	ENST00000488632	JUNB	P17275	347 aa	Predicted RBP	3.09	□□□□□ -1.91
LBR-208	ENST00000488632	ADM	P35318	185 aa		3.09	□□□□□ -1.91
LBR-208	ENST00000488632	TNNI2	P48788	182 aa		3.09	□□□□□ -1.91
LBR-208	ENST00000488632	USP11	P51784	963 aa		3.09	□□□□□ -1.91
LBR-208	ENST00000488632	RACK1	P63244	317 aa	Known RBP	3.09	□□□□□ -1.91
LBR-208	ENST00000488632	GSTM4	Q03013	218 aa		3.09	□□□□□ -1.91
LBR-208	ENST00000488632	SOX4	Q06945	474 aa	Predicted RBP	3.09	□□□□□ -1.91
LBR-208	ENST00000488632	RBL2	Q08999	1139 aa		3.09	□□□□□ -1.91
LBR-208	ENST00000488632	COL9A2	Q14055	689 aa	Predicted RBP	3.09	□□□□□ -1.91
LBR-208	ENST00000488632	CCDC85B	Q15834	202 aa	Predicted RBP	3.09	□□□□□ -1.91

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