RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 SNHG28P0DPA3 235 aa23.26■■□□□ 1.31
NECAB3-213ENST00000488489 CNTNAP1P78357 1384 aa23.26■■□□□ 1.31
NECAB3-213ENST00000488489 SNW1Q13573 536 aaKnown RBP23.26■■□□□ 1.31
NECAB3-213ENST00000488489 NOM1Q5C9Z4 860 aaKnown RBP23.26■■□□□ 1.31
NECAB3-213ENST00000488489 TNFRSF25Q93038 417 aa23.26■■□□□ 1.31
NECAB3-213ENST00000488489 ZBED3Q96IU2 234 aaPredicted RBP23.26■■□□□ 1.31
NECAB3-213ENST00000488489 MSNP26038 577 aaKnown RBP23.25■■□□□ 1.31
NECAB3-213ENST00000488489 ENGASEQ8NFI3 743 aa23.25■■□□□ 1.31
NECAB3-213ENST00000488489 TRIM34Q9BYJ4 488 aa23.25■■□□□ 1.31
NECAB3-213ENST00000488489 NUP62CLQ9H1M0 184 aa23.25■■□□□ 1.31
NECAB3-213ENST00000488489 MYH4Q9Y623 1939 aa23.25■■□□□ 1.31
NECAB3-213ENST00000488489 FRMPD2Q68DX3 1309 aaPredicted RBP23.24■■□□□ 1.31
NECAB3-213ENST00000488489 WNT10BO00744 389 aa23.24■■□□□ 1.31
NECAB3-213ENST00000488489 JAG1P78504 1218 aa23.24■■□□□ 1.31
NECAB3-213ENST00000488489 RRP1BQ14684 758 aaKnown RBP23.24■■□□□ 1.31
NECAB3-213ENST00000488489 NBPF9Q3BBW0 867 aa23.24■■□□□ 1.31
NECAB3-213ENST00000488489 RILPL1Q5EBL4 403 aa23.24■■□□□ 1.31
NECAB3-213ENST00000488489 FAM151AQ8WW52 585 aa23.24■■□□□ 1.31
NECAB3-213ENST00000488489 UBA5Q9GZZ9 404 aa23.24■■□□□ 1.31
NECAB3-213ENST00000488489 DDX19AQ9NUU7 478 aaKnown RBP23.24■■□□□ 1.31
NECAB3-213ENST00000488489 A0A1W2PQ27 194 aa23.24■■□□□ 1.31
NECAB3-213ENST00000488489 A0A1W2PQ64 194 aa23.24■■□□□ 1.31
NECAB3-213ENST00000488489 A0A1W2PQD8 194 aa23.24■■□□□ 1.31
NECAB3-213ENST00000488489 GDF11O95390 407 aa23.24■■□□□ 1.31
NECAB3-213ENST00000488489 NLRP5P59047 1200 aa23.24■■□□□ 1.31
NECAB3-213ENST00000488489 ATP2B2Q01814 1243 aa23.24■■□□□ 1.31
NECAB3-213ENST00000488489 TNIP1Q15025 636 aa23.24■■□□□ 1.31
NECAB3-213ENST00000488489 WWC2Q6AWC2 1192 aa23.24■■□□□ 1.31
NECAB3-213ENST00000488489 SIAH1Q8IUQ4 282 aa23.24■■□□□ 1.31
NECAB3-213ENST00000488489 FSIP1Q8NA03 581 aa23.24■■□□□ 1.31
NECAB3-213ENST00000488489 VEZTQ9HBM0 779 aa23.24■■□□□ 1.31
NECAB3-213ENST00000488489 PCDHB6Q9Y5E3 794 aa23.24■■□□□ 1.31
NECAB3-213ENST00000488489 CDAN1Q8IWY9 1227 aa23.23■■□□□ 1.31
NECAB3-213ENST00000488489 CLSTN2Q9H4D0 955 aa23.23■■□□□ 1.31
NECAB3-213ENST00000488489 MYOZ2Q9NPC6 264 aa23.23■■□□□ 1.31
NECAB3-213ENST00000488489 ARFGEF1Q9Y6D6 1849 aa23.23■■□□□ 1.31
NECAB3-213ENST00000488489 A0A1B0GVL5 298 aa23.23■■□□□ 1.31
NECAB3-213ENST00000488489 EGFRP00533 1210 aa23.23■■□□□ 1.31
NECAB3-213ENST00000488489 TPM2P07951 284 aa23.23■■□□□ 1.31
NECAB3-213ENST00000488489 SEPT2Q15019 361 aa23.23■■□□□ 1.31
NECAB3-213ENST00000488489 FUCA2Q9BTY2 467 aa23.23■■□□□ 1.31
NECAB3-213ENST00000488489 TSPY26PQ9H489 355 aa23.23■■□□□ 1.31
NECAB3-213ENST00000488489 SH3GLB2Q9NR46 395 aa23.23■■□□□ 1.31
NECAB3-213ENST00000488489 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.23■■□□□ 1.31
NECAB3-213ENST00000488489 PPP6R2O75170 966 aa23.22■■□□□ 1.31
NECAB3-213ENST00000488489 EEF2P13639 858 aaKnown RBP23.22■■□□□ 1.31
NECAB3-213ENST00000488489 SMARCA1P28370 1054 aa23.22■■□□□ 1.31
NECAB3-213ENST00000488489 MRPS27Q92552 414 aaKnown RBP23.22■■□□□ 1.31
NECAB3-213ENST00000488489 KANSL2Q9H9L4 492 aa23.22■■□□□ 1.31
NECAB3-213ENST00000488489 VAT1LQ9HCJ6 419 aa23.22■■□□□ 1.31
NECAB3-213ENST00000488489 ATP2B1P20020 1258 aa23.21■■□□□ 1.31
NECAB3-213ENST00000488489 FAM160A1Q05DH4 1040 aa23.21■■□□□ 1.31
NECAB3-213ENST00000488489 FKBP1CQ5VVH2 108 aa23.21■■□□□ 1.31
NECAB3-213ENST00000488489 HEATR3Q7Z4Q2 680 aa23.21■■□□□ 1.31
NECAB3-213ENST00000488489 TMEM39BQ9GZU3 492 aa23.21■■□□□ 1.31
NECAB3-213ENST00000488489 TNMDQ9H2S6 317 aa23.21■■□□□ 1.31
NECAB3-213ENST00000488489 RIOX1Q9H6W3 641 aa23.21■■□□□ 1.31
NECAB3-213ENST00000488489 BRMS1Q9HCU9 246 aa23.21■■□□□ 1.31
NECAB3-213ENST00000488489 BARHL2Q9NY43 387 aa23.21■■□□□ 1.31
NECAB3-213ENST00000488489 FZD9O00144 591 aa23.21■■□□□ 1.31
NECAB3-213ENST00000488489 STXBP3O00186 592 aa23.21■■□□□ 1.31
NECAB3-213ENST00000488489 WNT7AO00755 349 aa23.21■■□□□ 1.31
NECAB3-213ENST00000488489 NDUFA8P51970 172 aa23.21■■□□□ 1.31
NECAB3-213ENST00000488489 ABCB5Q2M3G0 1257 aa23.21■■□□□ 1.31
NECAB3-213ENST00000488489 ASPRV1Q53RT3 343 aa23.21■■□□□ 1.31
NECAB3-213ENST00000488489 CCDC73Q6ZRK6 1079 aa23.21■■□□□ 1.31
NECAB3-213ENST00000488489 HOMER1Q86YM7 354 aa23.21■■□□□ 1.31
NECAB3-213ENST00000488489 MKL1Q969V6 931 aa23.21■■□□□ 1.31
NECAB3-213ENST00000488489 ZNF543Q08ER8 600 aa23.2■■□□□ 1.3
NECAB3-213ENST00000488489 TMEM179Q6ZVK1 233 aa23.2■■□□□ 1.3
NECAB3-213ENST00000488489 CKAP2LQ8IYA6 745 aa23.2■■□□□ 1.3
NECAB3-213ENST00000488489 FMR1NBQ8N0W7 255 aaPredicted RBP23.2■■□□□ 1.3
NECAB3-213ENST00000488489 PIGSQ96S52 555 aa23.2■■□□□ 1.3
NECAB3-213ENST00000488489 GPCPD1Q9NPB8 672 aa23.2■■□□□ 1.3
NECAB3-213ENST00000488489 NYAP2Q9P242 653 aa23.2■■□□□ 1.3
NECAB3-213ENST00000488489 NOL7Q9UMY1 257 aaKnown RBP23.2■■□□□ 1.3
NECAB3-213ENST00000488489 OFD1O75665 1012 aa23.2■■□□□ 1.3
NECAB3-213ENST00000488489 ZNF280AP59817 542 aaPredicted RBP23.2■■□□□ 1.3
NECAB3-213ENST00000488489 MAP3K11Q16584 847 aa23.2■■□□□ 1.3
NECAB3-213ENST00000488489 RBM43Q6ZSC3 357 aaKnown RBP23.2■■□□□ 1.3
NECAB3-213ENST00000488489 CLIC6Q96NY7 704 aa23.2■■□□□ 1.3
NECAB3-213ENST00000488489 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.2■■□□□ 1.31e-8■□□□□ 10.8
NECAB3-213ENST00000488489 SPON1Q9HCB6 807 aa23.2■■□□□ 1.3
NECAB3-213ENST00000488489 HERC5Q9UII4 1024 aaKnown RBP23.2■■□□□ 1.3
NECAB3-213ENST00000488489 SCAF8Q9UPN6 1271 aaKnown RBP23.2■■□□□ 1.3
NECAB3-213ENST00000488489 GH2P01242 217 aa23.19■■□□□ 1.3
NECAB3-213ENST00000488489 RNF214Q8ND24 703 aa23.19■■□□□ 1.3
NECAB3-213ENST00000488489 RRP36Q96EU6 259 aaKnown RBP23.19■■□□□ 1.3
NECAB3-213ENST00000488489 PGAP2Q9UHJ9 254 aa23.19■■□□□ 1.3
NECAB3-213ENST00000488489 MYO1BO43795 1136 aa23.18■■□□□ 1.3
NECAB3-213ENST00000488489 CMA1P23946 247 aa23.18■■□□□ 1.3
NECAB3-213ENST00000488489 TTBK2Q6IQ55 1244 aa23.18■■□□□ 1.3
NECAB3-213ENST00000488489 FAM83AQ86UY5 434 aa23.18■■□□□ 1.3
NECAB3-213ENST00000488489 BLIDQ8IZY5 108 aa23.18■■□□□ 1.3
NECAB3-213ENST00000488489 JMYQ8N9B5 988 aa23.18■■□□□ 1.3
NECAB3-213ENST00000488489 PCDHA4Q9UN74 947 aa23.18■■□□□ 1.3
NECAB3-213ENST00000488489 M0R2N6 131 aa23.18■■□□□ 1.3
NECAB3-213ENST00000488489 RRP9O43818 475 aaKnown RBP23.18■■□□□ 1.3
NECAB3-213ENST00000488489 RPS12P25398 132 aaKnown RBP23.18■■□□□ 1.3
NECAB3-213ENST00000488489 CALML3P27482 149 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms