RNA–Protein interactions for RNA: ENST00000488443.1

UBAP2-211, Transcript of ubiquitin associated protein 2, humanhuman

TSL 5

Gene UBAP2, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-211ENST00000488443 RPAP2Q8IXW5 612 aaPredicted RBP16■□□□□ 0.15
UBAP2-211ENST00000488443 MB21D1Q8N884 522 aa16■□□□□ 0.15
UBAP2-211ENST00000488443 SHCBP1Q8NEM2 672 aa16■□□□□ 0.15
UBAP2-211ENST00000488443 BADQ92934 168 aa16■□□□□ 0.15
UBAP2-211ENST00000488443 LENG1Q96BZ8 264 aaPredicted RBP16■□□□□ 0.15
UBAP2-211ENST00000488443 MAML3Q96JK9 1138 aa16■□□□□ 0.15
UBAP2-211ENST00000488443 MROH8Q9H579 483 aa16■□□□□ 0.15
UBAP2-211ENST00000488443 ATP8A2Q9NTI2 1148 aa16■□□□□ 0.15
UBAP2-211ENST00000488443 TMX2Q9Y320 296 aa16■□□□□ 0.15
UBAP2-211ENST00000488443 SMCHD1A6NHR9 2005 aa16■□□□□ 0.15
UBAP2-211ENST00000488443 ZBED9Q6R2W3 1325 aa15.99■□□□□ 0.15
UBAP2-211ENST00000488443 WDR46O15213 610 aaKnown RBP15.99■□□□□ 0.15
UBAP2-211ENST00000488443 MS4A1P11836 297 aa15.99■□□□□ 0.15
UBAP2-211ENST00000488443 LRRC41Q15345 812 aa15.99■□□□□ 0.15
UBAP2-211ENST00000488443 C9orf50Q5SZB4 431 aa15.99■□□□□ 0.15
UBAP2-211ENST00000488443 C12orf60Q5U649 245 aa15.99■□□□□ 0.15
UBAP2-211ENST00000488443 SH3RF1Q7Z6J0 888 aa15.99■□□□□ 0.15
UBAP2-211ENST00000488443 NUP88Q99567 741 aaPredicted RBP15.99■□□□□ 0.15
UBAP2-211ENST00000488443 DDX19BQ9UMR2 479 aa15.99■□□□□ 0.15
UBAP2-211ENST00000488443 RAB11FIP3O75154 756 aa15.98■□□□□ 0.15
UBAP2-211ENST00000488443 PGK1P00558 417 aa15.98■□□□□ 0.15
UBAP2-211ENST00000488443 TAL1P17542 331 aaPredicted RBP15.98■□□□□ 0.15
UBAP2-211ENST00000488443 ATP5JP18859 108 aa15.98■□□□□ 0.15
UBAP2-211ENST00000488443 SHHQ15465 462 aa15.98■□□□□ 0.15
UBAP2-211ENST00000488443 DIEXFQ68CQ4 756 aaKnown RBP15.98■□□□□ 0.15
UBAP2-211ENST00000488443 C16orf86Q6ZW13 317 aa15.98■□□□□ 0.15
UBAP2-211ENST00000488443 GUCD1Q96NT3 240 aa15.98■□□□□ 0.15
UBAP2-211ENST00000488443 HAUS7Q99871 368 aa15.98■□□□□ 0.15
UBAP2-211ENST00000488443 PUS7LQ9H0K6 701 aaKnown RBP15.98■□□□□ 0.15
UBAP2-211ENST00000488443 ZBTB40Q9NUA8 1239 aa15.98■□□□□ 0.15
UBAP2-211ENST00000488443 COL6A3P12111 3177 aa15.97■□□□□ 0.15
UBAP2-211ENST00000488443 MINDY4BA8MYZ0 360 aa15.97■□□□□ 0.15
UBAP2-211ENST00000488443 KCTD2Q14681 263 aa15.97■□□□□ 0.15
UBAP2-211ENST00000488443 ZNF697Q5TEC3 545 aa15.97■□□□□ 0.15
UBAP2-211ENST00000488443 TSHZ3Q63HK5 1081 aa15.97■□□□□ 0.15
UBAP2-211ENST00000488443 CTR9Q6PD62 1173 aa15.97■□□□□ 0.15
UBAP2-211ENST00000488443 CHMP4CQ96CF2 233 aa15.97■□□□□ 0.15
UBAP2-211ENST00000488443 CCDC17Q96LX7 622 aa15.97■□□□□ 0.15
UBAP2-211ENST00000488443 GOPCQ9HD26 462 aa15.97■□□□□ 0.15
UBAP2-211ENST00000488443 XPNPEP3Q9NQH7 507 aa15.97■□□□□ 0.15
UBAP2-211ENST00000488443 ISY1Q9ULR0 285 aaKnown RBP15.97■□□□□ 0.15
UBAP2-211ENST00000488443 SLC25A27O95847 323 aa15.96■□□□□ 0.15
UBAP2-211ENST00000488443 IGHA2P01877 340 aa15.96■□□□□ 0.15
UBAP2-211ENST00000488443 RARBP10826 455 aa15.96■□□□□ 0.15
UBAP2-211ENST00000488443 PDLIM7Q9NR12 457 aa15.96■□□□□ 0.15
UBAP2-211ENST00000488443 TRIM43BA6NCK2 446 aa15.95■□□□□ 0.14
UBAP2-211ENST00000488443 VWA5AO00534 786 aa15.95■□□□□ 0.14
UBAP2-211ENST00000488443 PQBP1O60828 265 aaKnown RBP15.95■□□□□ 0.14
UBAP2-211ENST00000488443 STAT3P40763 770 aa15.95■□□□□ 0.14
UBAP2-211ENST00000488443 TLE2Q04725 743 aa15.95■□□□□ 0.14
UBAP2-211ENST00000488443 RIOX2Q8IUF8 465 aa15.95■□□□□ 0.14
UBAP2-211ENST00000488443 ABRAQ8N0Z2 381 aa15.95■□□□□ 0.14
UBAP2-211ENST00000488443 CPXCR1Q8N123 301 aa15.95■□□□□ 0.14
UBAP2-211ENST00000488443 TRIM43Q96BQ3 446 aaPredicted RBP15.95■□□□□ 0.14
UBAP2-211ENST00000488443 LRRCC1Q9C099 1032 aa15.95■□□□□ 0.14
UBAP2-211ENST00000488443 KANSL2Q9H9L4 492 aa15.95■□□□□ 0.14
UBAP2-211ENST00000488443 MKNK2Q9HBH9 465 aa15.95■□□□□ 0.14
UBAP2-211ENST00000488443 PPP1R9AQ9ULJ8 1098 aa15.95■□□□□ 0.14
UBAP2-211ENST00000488443 MYH4Q9Y623 1939 aa15.95■□□□□ 0.14
UBAP2-211ENST00000488443 UBE3CQ15386 1083 aa15.94■□□□□ 0.14
UBAP2-211ENST00000488443 C20orf194Q5TEA3 1177 aa15.94■□□□□ 0.14
UBAP2-211ENST00000488443 SNRNP48Q6IEG0 339 aaKnown RBP15.94■□□□□ 0.14
UBAP2-211ENST00000488443 ZSCAN25Q6NSZ9 544 aa15.94■□□□□ 0.14
UBAP2-211ENST00000488443 TINF2Q9BSI4 451 aa15.94■□□□□ 0.14
UBAP2-211ENST00000488443 ZHX1Q9UKY1 873 aaPredicted RBP15.94■□□□□ 0.14
UBAP2-211ENST00000488443 CTDP1Q9Y5B0 961 aaPredicted RBP15.94■□□□□ 0.14
UBAP2-211ENST00000488443 POTEB2H3BUK9 544 aa15.93■□□□□ 0.14
UBAP2-211ENST00000488443 PRDM1O75626 825 aa15.93■□□□□ 0.14
UBAP2-211ENST00000488443 RNF180Q86T96 592 aa15.93■□□□□ 0.14
UBAP2-211ENST00000488443 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.93■□□□□ 0.14
UBAP2-211ENST00000488443 DDX11Q96FC9 970 aa15.93■□□□□ 0.14
UBAP2-211ENST00000488443 ARPP21Q9UBL0 812 aaPredicted RBP15.93■□□□□ 0.14
UBAP2-211ENST00000488443 CNPY2Q9Y2B0 182 aa15.93■□□□□ 0.14
UBAP2-211ENST00000488443 DNAH12Q6ZR08 3092 aa15.93■□□□□ 0.14
UBAP2-211ENST00000488443 APPP05067 770 aa15.92■□□□□ 0.14
UBAP2-211ENST00000488443 RASA1P20936 1047 aa15.92■□□□□ 0.14
UBAP2-211ENST00000488443 ITGB8P26012 769 aa15.92■□□□□ 0.14
UBAP2-211ENST00000488443 ZNF792Q3KQV3 632 aa15.92■□□□□ 0.14
UBAP2-211ENST00000488443 MYLIPQ8WY64 445 aa15.92■□□□□ 0.14
UBAP2-211ENST00000488443 KIFC2Q96AC6 838 aa15.92■□□□□ 0.14
UBAP2-211ENST00000488443 CDX2Q99626 313 aaPredicted RBP15.92■□□□□ 0.14
UBAP2-211ENST00000488443 SLF1Q9BQI6 1058 aa15.92■□□□□ 0.14
UBAP2-211ENST00000488443 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.92■□□□□ 0.14
UBAP2-211ENST00000488443 CLIP2Q9UDT6 1046 aa15.92■□□□□ 0.14
UBAP2-211ENST00000488443 RCAN3Q9UKA8 241 aa15.92■□□□□ 0.14
UBAP2-211ENST00000488443 ZNF214Q9UL59 606 aaPredicted RBP15.92■□□□□ 0.14
UBAP2-211ENST00000488443 PHF24Q9UPV7 400 aa15.92■□□□□ 0.14
UBAP2-211ENST00000488443 RIPK3Q9Y572 518 aa15.92■□□□□ 0.14
UBAP2-211ENST00000488443 MCM3APO60318 1980 aa15.92■□□□□ 0.14
UBAP2-211ENST00000488443 GREB1LQ9C091 1923 aaPredicted RBP15.92■□□□□ 0.14
UBAP2-211ENST00000488443 A0A1W2PQ45 241 aaPredicted RBP15.91■□□□□ 0.14
UBAP2-211ENST00000488443 A0A1W2PQY0 241 aa15.91■□□□□ 0.14
UBAP2-211ENST00000488443 NDUFB10O96000 172 aa15.91■□□□□ 0.14
UBAP2-211ENST00000488443 CLTBP09497 229 aa15.91■□□□□ 0.14
UBAP2-211ENST00000488443 ZNF865P0CJ78 1059 aaPredicted RBP15.91■□□□□ 0.14
UBAP2-211ENST00000488443 AKR1A1P14550 325 aa15.91■□□□□ 0.14
UBAP2-211ENST00000488443 RAG1P15918 1043 aa15.91■□□□□ 0.14
UBAP2-211ENST00000488443 TDO2P48775 406 aa15.91■□□□□ 0.14
UBAP2-211ENST00000488443 IRX5P78411 483 aaPredicted RBP15.91■□□□□ 0.14
UBAP2-211ENST00000488443 SNX17Q15036 470 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms