RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 IGKV6D-41A0A0C4DH26 115 aa14.68□□□□□ -0.06
SDC3-204ENST00000487984 PRDM1O75626 825 aa14.68□□□□□ -0.06
SDC3-204ENST00000487984 CYP2C19P33261 490 aa14.68□□□□□ -0.06
SDC3-204ENST00000487984 HDAC1Q13547 482 aaPredicted RBP14.68□□□□□ -0.06
SDC3-204ENST00000487984 DPP9Q86TI2 863 aa14.68□□□□□ -0.06
SDC3-204ENST00000487984 NCAPG2Q86XI2 1143 aa14.68□□□□□ -0.06
SDC3-204ENST00000487984 PRO3102Q9H379 93 aa14.68□□□□□ -0.06
SDC3-204ENST00000487984 MROH8Q9H579 483 aa14.68□□□□□ -0.06
SDC3-204ENST00000487984 NYAP2Q9P242 653 aa14.68□□□□□ -0.06
SDC3-204ENST00000487984 ZBTB47Q9UFB7 747 aaPredicted RBP14.68□□□□□ -0.06
SDC3-204ENST00000487984 PPP1R9AQ9ULJ8 1098 aa14.68□□□□□ -0.06
SDC3-204ENST00000487984 ADAMTS5Q9UNA0 930 aa14.68□□□□□ -0.06
SDC3-204ENST00000487984 PFASO15067 1338 aa14.67□□□□□ -0.06
SDC3-204ENST00000487984 VWA5AO00534 786 aa14.67□□□□□ -0.06
SDC3-204ENST00000487984 COBLO75128 1261 aa14.67□□□□□ -0.06
SDC3-204ENST00000487984 OLFML2BQ68BL8 750 aa14.67□□□□□ -0.06
SDC3-204ENST00000487984 C7orf61Q8IZ16 206 aa14.67□□□□□ -0.06
SDC3-204ENST00000487984 ABRAQ8N0Z2 381 aa14.67□□□□□ -0.06
SDC3-204ENST00000487984 TRPV1Q8NER1 839 aa14.67□□□□□ -0.06
SDC3-204ENST00000487984 NUP88Q99567 741 aaPredicted RBP14.67□□□□□ -0.06
SDC3-204ENST00000487984 NACAP1Q9BZK3 213 aa14.67□□□□□ -0.06
SDC3-204ENST00000487984 ZNF287Q9HBT7 754 aa14.67□□□□□ -0.06
SDC3-204ENST00000487984 GREB1LQ9C091 1923 aaPredicted RBP14.66□□□□□ -0.06
SDC3-204ENST00000487984 SLC25A27O95847 323 aa14.66□□□□□ -0.06
SDC3-204ENST00000487984 NDUFB10O96000 172 aa14.66□□□□□ -0.06
SDC3-204ENST00000487984 COL6A1P12109 1028 aa14.66□□□□□ -0.06
SDC3-204ENST00000487984 CYBAP13498 195 aa14.66□□□□□ -0.06
SDC3-204ENST00000487984 CCDC129Q6ZRS4 1044 aa14.66□□□□□ -0.06
SDC3-204ENST00000487984 ZNF444Q8N0Y2 327 aaPredicted RBP14.66□□□□□ -0.06
SDC3-204ENST00000487984 REPS2Q8NFH8 660 aa14.66□□□□□ -0.06
SDC3-204ENST00000487984 CEP95Q96GE4 821 aa14.66□□□□□ -0.06
SDC3-204ENST00000487984 NAPBQ9H115 298 aa14.66□□□□□ -0.06
SDC3-204ENST00000487984 CLIP2Q9UDT6 1046 aa14.66□□□□□ -0.06
SDC3-204ENST00000487984 STAP2Q9UGK3 403 aa14.66□□□□□ -0.06
SDC3-204ENST00000487984 DDX20Q9UHI6 824 aaKnown RBP14.66□□□□□ -0.06
SDC3-204ENST00000487984 ZNF236Q9UL36 1845 aa14.66□□□□□ -0.06
SDC3-204ENST00000487984 F5H6K3 240 aa14.65□□□□□ -0.06
SDC3-204ENST00000487984 FOXP2O15409 715 aa14.65□□□□□ -0.06
SDC3-204ENST00000487984 FCER1AP12319 257 aa14.65□□□□□ -0.06
SDC3-204ENST00000487984 CNGA1P29973 690 aa14.65□□□□□ -0.06
SDC3-204ENST00000487984 PDE1AP54750 535 aa14.65□□□□□ -0.06
SDC3-204ENST00000487984 KLRC3Q07444 240 aa14.65□□□□□ -0.06
SDC3-204ENST00000487984 PPARAQ07869 468 aa14.65□□□□□ -0.06
SDC3-204ENST00000487984 RIOX2Q8IUF8 465 aa14.65□□□□□ -0.06
SDC3-204ENST00000487984 SLF1Q9BQI6 1058 aa14.65□□□□□ -0.06
SDC3-204ENST00000487984 SLC5A4Q9NY91 659 aa14.65□□□□□ -0.06
SDC3-204ENST00000487984 MTMR4Q9NYA4 1195 aa14.65□□□□□ -0.06
SDC3-204ENST00000487984 ZNF214Q9UL59 606 aaPredicted RBP14.65□□□□□ -0.06
SDC3-204ENST00000487984 PLIN4Q96Q06 1357 aa14.64□□□□□ -0.07
SDC3-204ENST00000487984 MSCO60682 206 aa14.64□□□□□ -0.07
SDC3-204ENST00000487984 STAT3P40763 770 aa14.64□□□□□ -0.07
SDC3-204ENST00000487984 PDE4BQ07343 736 aa14.64□□□□□ -0.07
SDC3-204ENST00000487984 MKL1Q969V6 931 aa14.64□□□□□ -0.07
SDC3-204ENST00000487984 EVI5LQ96CN4 794 aa14.64□□□□□ -0.07
SDC3-204ENST00000487984 MMP19Q99542 508 aa14.64□□□□□ -0.07
SDC3-204ENST00000487984 ZMYND8Q9ULU4 1186 aaPredicted RBP14.64□□□□□ -0.07
SDC3-204ENST00000487984 ALPK3Q96L96 1907 aa14.64□□□□□ -0.07
SDC3-204ENST00000487984 TTLL1O95922 423 aa14.63□□□□□ -0.07
SDC3-204ENST00000487984 PGK2P07205 417 aa14.63□□□□□ -0.07
SDC3-204ENST00000487984 SLC3A2P08195 630 aaKnown RBP14.63□□□□□ -0.07
SDC3-204ENST00000487984 TSPY3P0CV98 308 aa14.63□□□□□ -0.07
SDC3-204ENST00000487984 TSPY8P0CW00 308 aa14.63□□□□□ -0.07
SDC3-204ENST00000487984 FAM47AQ5JRC9 791 aa14.63□□□□□ -0.07
SDC3-204ENST00000487984 LRRC47Q8N1G4 583 aaKnown RBP14.63□□□□□ -0.07
SDC3-204ENST00000487984 NEDD1Q8NHV4 660 aa14.63□□□□□ -0.07
SDC3-204ENST00000487984 MAML3Q96JK9 1138 aa14.63□□□□□ -0.07
SDC3-204ENST00000487984 SYNPO2Q9UMS6 1093 aa14.63□□□□□ -0.07
SDC3-204ENST00000487984 PARP14Q460N5 1801 aa14.63□□□□□ -0.07
SDC3-204ENST00000487984 SZT2Q5T011 3432 aa14.62□□□□□ -0.07
SDC3-204ENST00000487984 SYN1P17600 705 aa14.62□□□□□ -0.07
SDC3-204ENST00000487984 COPB2P35606 906 aa14.62□□□□□ -0.07
SDC3-204ENST00000487984 TFAP4Q01664 338 aa14.62□□□□□ -0.07
SDC3-204ENST00000487984 AAMPQ13685 434 aa14.62□□□□□ -0.07
SDC3-204ENST00000487984 KCTD2Q14681 263 aa14.62□□□□□ -0.07
SDC3-204ENST00000487984 LRRC26Q2I0M4 334 aa14.62□□□□□ -0.07
SDC3-204ENST00000487984 PRAMEF19Q5SWL8 479 aa14.62□□□□□ -0.07
SDC3-204ENST00000487984 VPS53Q5VIR6 699 aa14.62□□□□□ -0.07
SDC3-204ENST00000487984 PRPF38AQ8NAV1 312 aaKnown RBP14.62□□□□□ -0.07
SDC3-204ENST00000487984 GMCL1P1Q8NEA9 526 aa14.62□□□□□ -0.07
SDC3-204ENST00000487984 TEX13BQ9BXU2 312 aa14.62□□□□□ -0.07
SDC3-204ENST00000487984 LNPKQ9C0E8 428 aa14.62□□□□□ -0.07
SDC3-204ENST00000487984 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.62□□□□□ -0.07
SDC3-204ENST00000487984 SEPT4O43236 478 aa14.61□□□□□ -0.07
SDC3-204ENST00000487984 CTDSPL2Q05D32 466 aa14.61□□□□□ -0.07
SDC3-204ENST00000487984 ZNF792Q3KQV3 632 aa14.61□□□□□ -0.07
SDC3-204ENST00000487984 ANO1Q5XXA6 986 aa14.61□□□□□ -0.07
SDC3-204ENST00000487984 SNRNP48Q6IEG0 339 aaKnown RBP14.61□□□□□ -0.07
SDC3-204ENST00000487984 KIFC2Q96AC6 838 aa14.61□□□□□ -0.07
SDC3-204ENST00000487984 FAM227BQ96M60 508 aa14.61□□□□□ -0.07
SDC3-204ENST00000487984 GDF15Q99988 308 aa14.61□□□□□ -0.07
SDC3-204ENST00000487984 SENP6Q9GZR1 1112 aaPredicted RBP14.61□□□□□ -0.07
SDC3-204ENST00000487984 INCENPQ9NQS7 918 aa14.61□□□□□ -0.07
SDC3-204ENST00000487984 HELLSQ9NRZ9 838 aa14.61□□□□□ -0.07
SDC3-204ENST00000487984 LAMA3Q16787 3333 aa14.6□□□□□ -0.07
SDC3-204ENST00000487984 A0A0D9SFI3 127 aa14.6□□□□□ -0.07
SDC3-204ENST00000487984 A0A1W2PPC1 479 aa14.6□□□□□ -0.07
SDC3-204ENST00000487984 DNM1LO00429 736 aa14.6□□□□□ -0.07
SDC3-204ENST00000487984 ATP2A1O14983 1001 aa14.6□□□□□ -0.07
SDC3-204ENST00000487984 GJC2Q5T442 439 aaPredicted RBP14.6□□□□□ -0.07
SDC3-204ENST00000487984 SLFN13Q68D06 897 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms