RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 PCDHAC2Q9Y5I4 1007 aa23.37■■□□□ 1.33
PHF1-209ENST00000487667 TRIM75PA6NK02 468 aa23.37■■□□□ 1.33
PHF1-209ENST00000487667 CXCL9Q07325 125 aa23.37■■□□□ 1.33
PHF1-209ENST00000487667 SPDYE2Q495Y8 402 aa23.37■■□□□ 1.33
PHF1-209ENST00000487667 AXDND1Q5T1B0 1012 aaPredicted RBP23.37■■□□□ 1.33
PHF1-209ENST00000487667 KRI1Q8N9T8 703 aaKnown RBP23.37■■□□□ 1.33
PHF1-209ENST00000487667 DAGLBQ8NCG7 672 aa23.37■■□□□ 1.33
PHF1-209ENST00000487667 MKL1Q969V6 931 aa23.37■■□□□ 1.33
PHF1-209ENST00000487667 SYT17Q9BSW7 474 aa23.37■■□□□ 1.33
PHF1-209ENST00000487667 CABP5Q9NP86 173 aa23.37■■□□□ 1.33
PHF1-209ENST00000487667 BARHL2Q9NY43 387 aa23.37■■□□□ 1.33
PHF1-209ENST00000487667 COL4A5P29400 1685 aa23.36■■□□□ 1.33
PHF1-209ENST00000487667 hCG_1642624A0A1W2PR95 340 aa23.36■■□□□ 1.33
PHF1-209ENST00000487667 SNW1Q13573 536 aaKnown RBP23.36■■□□□ 1.33
PHF1-209ENST00000487667 FUCA2Q9BTY2 467 aa23.36■■□□□ 1.33
PHF1-209ENST00000487667 ZNF70Q9UC06 446 aaPredicted RBP23.36■■□□□ 1.33
PHF1-209ENST00000487667 PCDHA4Q9UN74 947 aa23.36■■□□□ 1.33
PHF1-209ENST00000487667 NFKBIEO00221 500 aa23.35■■□□□ 1.33
PHF1-209ENST00000487667 SH3BP5LQ7L8J4 393 aa23.35■■□□□ 1.33
PHF1-209ENST00000487667 FAM83AQ86UY5 434 aa23.35■■□□□ 1.33
PHF1-209ENST00000487667 OXER1Q8TDS5 423 aa23.35■■□□□ 1.33
PHF1-209ENST00000487667 PANK2Q9BZ23 570 aa23.35■■□□□ 1.33
PHF1-209ENST00000487667 RIOX1Q9H6W3 641 aa23.35■■□□□ 1.33
PHF1-209ENST00000487667 FAM237AA0A1B0GTK4 181 aa23.35■■□□□ 1.33
PHF1-209ENST00000487667 TOB1P50616 345 aaPredicted RBP23.35■■□□□ 1.33
PHF1-209ENST00000487667 BLIDQ8IZY5 108 aa23.35■■□□□ 1.33
PHF1-209ENST00000487667 FMR1NBQ8N0W7 255 aaPredicted RBP23.35■■□□□ 1.33
PHF1-209ENST00000487667 ZNF579Q8NAF0 562 aaKnown RBP23.35■■□□□ 1.33
PHF1-209ENST00000487667 TNFRSF25Q93038 417 aa23.35■■□□□ 1.33
PHF1-209ENST00000487667 TIGD1Q96MW7 591 aa23.35■■□□□ 1.33
PHF1-209ENST00000487667 CSRNP1Q96S65 589 aa23.35■■□□□ 1.33
PHF1-209ENST00000487667 DNAJC18Q9H819 358 aa23.35■■□□□ 1.33
PHF1-209ENST00000487667 SIPA1L1O43166 1804 aa23.34■■□□□ 1.33
PHF1-209ENST00000487667 CYTH3O43739 400 aa23.34■■□□□ 1.33
PHF1-209ENST00000487667 USP17L2Q6R6M4 530 aa23.34■■□□□ 1.33
PHF1-209ENST00000487667 SASS6Q6UVJ0 657 aa23.34■■□□□ 1.33
PHF1-209ENST00000487667 GOLPH3LQ9H4A5 285 aa23.34■■□□□ 1.33
PHF1-209ENST00000487667 GNA11P29992 359 aa23.33■■□□□ 1.33
PHF1-209ENST00000487667 CCDC173Q0VFZ6 552 aa23.33■■□□□ 1.33
PHF1-209ENST00000487667 NPY5RQ15761 445 aa23.33■■□□□ 1.33
PHF1-209ENST00000487667 SHISA4Q96DD7 197 aa23.33■■□□□ 1.33
PHF1-209ENST00000487667 MTMR7Q9Y216 660 aa23.33■■□□□ 1.33
PHF1-209ENST00000487667 USP17L5A8MUK1 530 aa23.33■■□□□ 1.32
PHF1-209ENST00000487667 MARCKSP29966 332 aaPredicted RBP23.33■■□□□ 1.32
PHF1-209ENST00000487667 ZNF543Q08ER8 600 aa23.33■■□□□ 1.32
PHF1-209ENST00000487667 CAMK4Q16566 473 aa23.33■■□□□ 1.32
PHF1-209ENST00000487667 ABCB5Q2M3G0 1257 aa23.33■■□□□ 1.32
PHF1-209ENST00000487667 RBM26Q5T8P6 1007 aaKnown RBP23.33■■□□□ 1.32
PHF1-209ENST00000487667 DCAF4Q8WV16 495 aa23.33■■□□□ 1.32
PHF1-209ENST00000487667 GOLGA8HP0CJ92 632 aa23.32■■□□□ 1.32
PHF1-209ENST00000487667 PTPREP23469 700 aa23.32■■□□□ 1.32
PHF1-209ENST00000487667 HEATR3Q7Z4Q2 680 aa23.32■■□□□ 1.32
PHF1-209ENST00000487667 LRRC47Q8N1G4 583 aaKnown RBP23.32■■□□□ 1.32
PHF1-209ENST00000487667 ZBED3Q96IU2 234 aaPredicted RBP23.32■■□□□ 1.32
PHF1-209ENST00000487667 C6orf50Q9HD87 102 aa23.32■■□□□ 1.32
PHF1-209ENST00000487667 ZBTB12Q9Y330 459 aaPredicted RBP23.32■■□□□ 1.32
PHF1-209ENST00000487667 ESYT2A0FGR8 921 aa23.31■■□□□ 1.32
PHF1-209ENST00000487667 STXBP3O00186 592 aa23.31■■□□□ 1.32
PHF1-209ENST00000487667 TBC1D12O60347 775 aa23.31■■□□□ 1.32
PHF1-209ENST00000487667 TNNI2P48788 182 aa23.31■■□□□ 1.32
PHF1-209ENST00000487667 RESP18Q5W5W9 173 aa23.31■■□□□ 1.32
PHF1-209ENST00000487667 WWC2Q6AWC2 1192 aa23.31■■□□□ 1.32
PHF1-209ENST00000487667 FERMT2Q96AC1 680 aa23.31■■□□□ 1.32
PHF1-209ENST00000487667 FAM13BQ9NYF5 915 aa23.31■■□□□ 1.32
PHF1-209ENST00000487667 SRPRBQ9Y5M8 271 aaKnown RBP23.31■■□□□ 1.32
PHF1-209ENST00000487667 A0A1B0GVL5 298 aa23.31■■□□□ 1.32
PHF1-209ENST00000487667 EIF6P56537 245 aaKnown RBP23.31■■□□□ 1.32
PHF1-209ENST00000487667 RASSF7Q02833 373 aa23.31■■□□□ 1.32
PHF1-209ENST00000487667 PPP1R18Q6NYC8 613 aa23.31■■□□□ 1.32
PHF1-209ENST00000487667 SDF4Q9BRK5 362 aa23.31■■□□□ 1.32
PHF1-209ENST00000487667 ZMYND12Q9H0C1 365 aa23.31■■□□□ 1.32
PHF1-209ENST00000487667 TCP10L2B9ZVM9 353 aa23.3■■□□□ 1.32
PHF1-209ENST00000487667 NDUFA8P51970 172 aa23.3■■□□□ 1.32
PHF1-209ENST00000487667 ICA1Q05084 483 aa23.3■■□□□ 1.32
PHF1-209ENST00000487667 TYRO3Q06418 890 aa23.3■■□□□ 1.32
PHF1-209ENST00000487667 PIBF1Q8WXW3 757 aa23.3■■□□□ 1.32
PHF1-209ENST00000487667 DPF2Q92785 391 aa23.3■■□□□ 1.32
PHF1-209ENST00000487667 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.3■■□□□ 1.32
PHF1-209ENST00000487667 HPSEQ9Y251 543 aa23.3■■□□□ 1.32
PHF1-209ENST00000487667 PCDHB6Q9Y5E3 794 aa23.3■■□□□ 1.32
PHF1-209ENST00000487667 ARFGEF1Q9Y6D6 1849 aa23.3■■□□□ 1.32
PHF1-209ENST00000487667 PFKFB1P16118 471 aa23.29■■□□□ 1.32
PHF1-209ENST00000487667 SYKP43405 635 aa23.29■■□□□ 1.32
PHF1-209ENST00000487667 ZNF280AP59817 542 aaPredicted RBP23.29■■□□□ 1.32
PHF1-209ENST00000487667 TNFAIP1Q13829 316 aa23.29■■□□□ 1.32
PHF1-209ENST00000487667 TTC38Q5R3I4 469 aa23.29■■□□□ 1.32
PHF1-209ENST00000487667 ARHGAP27Q6ZUM4 889 aa23.29■■□□□ 1.32
PHF1-209ENST00000487667 ELOA2Q8IYF1 753 aaPredicted RBP23.29■■□□□ 1.32
PHF1-209ENST00000487667 MYOZ2Q9NPC6 264 aa23.29■■□□□ 1.32
PHF1-209ENST00000487667 MYH4Q9Y623 1939 aa23.29■■□□□ 1.32
PHF1-209ENST00000487667 CCDC194A0A1B0GVG4 234 aa23.29■■□□□ 1.32
PHF1-209ENST00000487667 ZNF202O95125 648 aa23.29■■□□□ 1.32
PHF1-209ENST00000487667 NAPAP54920 295 aa23.29■■□□□ 1.32
PHF1-209ENST00000487667 ATP2B2Q01814 1243 aa23.29■■□□□ 1.32
PHF1-209ENST00000487667 SLC35G1Q2M3R5 365 aa23.29■■□□□ 1.32
PHF1-209ENST00000487667 GMCL1P1Q8NEA9 526 aa23.29■■□□□ 1.32
PHF1-209ENST00000487667 GPKOWQ92917 476 aaPredicted RBP eCLIP23.29■■□□□ 1.325e-9■■■■□ 21.7
PHF1-209ENST00000487667 HOOK1Q9UJC3 728 aaKnown RBP23.29■■□□□ 1.32
PHF1-209ENST00000487667 FBXO2Q9UK22 296 aaPredicted RBP23.29■■□□□ 1.32
PHF1-209ENST00000487667 EEF2P13639 858 aaKnown RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms