RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 RPAP3Q9H6T3 665 aaPredicted RBP7.32□□□□□ -1.24
COL4A3-206ENST00000487633 PALD1Q9ULE6 856 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 PCDHA11Q9Y5I1 949 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 IVNS1ABPQ9Y6Y0 642 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 MYO7AQ13402 2215 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 CACNA1GO43497 2377 aa7.32□□□□□ -1.24
COL4A3-206ENST00000487633 SIP14410 1827 aa7.31□□□□□ -1.24
COL4A3-206ENST00000487633 A0A1W2PRG0 241 aa7.31□□□□□ -1.24
COL4A3-206ENST00000487633 EYA2O00167 538 aa7.31□□□□□ -1.24
COL4A3-206ENST00000487633 ASNSP08243 561 aa7.31□□□□□ -1.24
COL4A3-206ENST00000487633 RARBP10826 455 aa7.31□□□□□ -1.24
COL4A3-206ENST00000487633 PTPRZ1P23471 2315 aaPredicted RBP7.31□□□□□ -1.24
COL4A3-206ENST00000487633 RNF180Q86T96 592 aa7.31□□□□□ -1.24
COL4A3-206ENST00000487633 METTL16Q86W50 562 aaKnown RBP7.31□□□□□ -1.24
COL4A3-206ENST00000487633 DZIP1Q86YF9 867 aaKnown RBP7.31□□□□□ -1.24
COL4A3-206ENST00000487633 MAPKAPK5Q8IW41 473 aa7.31□□□□□ -1.24
COL4A3-206ENST00000487633 TMEM199Q8N511 208 aa7.31□□□□□ -1.24
COL4A3-206ENST00000487633 PPP1R13LQ8WUF5 828 aa7.31□□□□□ -1.24
COL4A3-206ENST00000487633 NSUN4Q96CB9 384 aaKnown RBP7.31□□□□□ -1.24
COL4A3-206ENST00000487633 SPATC1LQ9H0A9 340 aa7.31□□□□□ -1.24
COL4A3-206ENST00000487633 SIL1Q9H173 461 aa7.31□□□□□ -1.24
COL4A3-206ENST00000487633 UBE2ZQ9H832 354 aaPredicted RBP7.31□□□□□ -1.24
COL4A3-206ENST00000487633 SAP30BPQ9UHR5 308 aaKnown RBP7.31□□□□□ -1.24
COL4A3-206ENST00000487633 PA2G4Q9UQ80 394 aaKnown RBP7.31□□□□□ -1.24
COL4A3-206ENST00000487633 FANCIQ9NVI1 1328 aa7.3□□□□□ -1.24
COL4A3-206ENST00000487633 MED19A0JLT2 244 aaPredicted RBP7.3□□□□□ -1.24
COL4A3-206ENST00000487633 SOWAHBA6NEL2 793 aa7.3□□□□□ -1.24
COL4A3-206ENST00000487633 ZBBXA8MT70 800 aa7.3□□□□□ -1.24
COL4A3-206ENST00000487633 DCXO43602 365 aa7.3□□□□□ -1.24
COL4A3-206ENST00000487633 GFRA3O60609 400 aa7.3□□□□□ -1.24
COL4A3-206ENST00000487633 NPM3O75607 178 aaKnown RBP7.3□□□□□ -1.24
COL4A3-206ENST00000487633 GLRX3O76003 335 aaKnown RBP7.3□□□□□ -1.24
COL4A3-206ENST00000487633 SNAI1O95863 264 aaPredicted RBP7.3□□□□□ -1.24
COL4A3-206ENST00000487633 ASGR1P07306 291 aa7.3□□□□□ -1.24
COL4A3-206ENST00000487633 KCNA5P22460 613 aa7.3□□□□□ -1.24
COL4A3-206ENST00000487633 TIMM10P62072 90 aa7.3□□□□□ -1.24
COL4A3-206ENST00000487633 CCNA1P78396 465 aa7.3□□□□□ -1.24
COL4A3-206ENST00000487633 ATP2B3Q16720 1220 aa7.3□□□□□ -1.24
COL4A3-206ENST00000487633 CSPP1Q1MSJ5 1256 aa7.3□□□□□ -1.24
COL4A3-206ENST00000487633 TMEM63BQ5T3F8 832 aa7.3□□□□□ -1.24
COL4A3-206ENST00000487633 AGBL1Q96MI9 1066 aa7.3□□□□□ -1.24
COL4A3-206ENST00000487633 HERC5Q9UII4 1024 aaKnown RBP7.3□□□□□ -1.24
COL4A3-206ENST00000487633 DENND2AQ9ULE3 1009 aa7.3□□□□□ -1.24
COL4A3-206ENST00000487633 DDX49Q9Y6V7 483 aaKnown RBP7.3□□□□□ -1.24
COL4A3-206ENST00000487633 ASTN1O14525 1302 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 DMXL1Q9Y485 3027 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 CFAP47Q6ZTR5 3102 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 GRXCR2A6NFK2 248 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 H3BQ06 376 aaPredicted RBP7.29□□□□□ -1.24
COL4A3-206ENST00000487633 ARVCFO00192 962 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 GTPBP6O43824 516 aaPredicted RBP7.29□□□□□ -1.24
COL4A3-206ENST00000487633 ALDH1L1O75891 902 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 ATP2A2P16615 1042 aaKnown RBP7.29□□□□□ -1.24
COL4A3-206ENST00000487633 BEX3Q00994 111 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 EXOSC9Q06265 439 aaKnown RBP7.29□□□□□ -1.24
COL4A3-206ENST00000487633 WDR43Q15061 677 aaKnown RBP eCLIP7.29□□□□□ -1.24
COL4A3-206ENST00000487633 TCTN1Q2MV58 587 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 ZNF792Q3KQV3 632 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 LEXMQ3ZCV2 418 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 TMEM67Q5HYA8 995 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 PTCRAQ6ISU1 281 aaPredicted RBP7.29□□□□□ -1.24
COL4A3-206ENST00000487633 ASCL5Q7RTU5 278 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 NCAPG2Q86XI2 1143 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 CLEC10AQ8IUN9 316 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 TEX11Q8IYF3 940 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 CCER1Q8TC90 406 aaPredicted RBP7.29□□□□□ -1.24
COL4A3-206ENST00000487633 GTF3C2Q8WUA4 911 aaPredicted RBP7.29□□□□□ -1.24
COL4A3-206ENST00000487633 TGFBRAP1Q8WUH2 860 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 ATG4CQ96DT6 458 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 TINF2Q9BSI4 451 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 TSEN34Q9BSV6 310 aaKnown RBP7.29□□□□□ -1.24
COL4A3-206ENST00000487633 NOC4LQ9BVI4 516 aaKnown RBP7.29□□□□□ -1.24
COL4A3-206ENST00000487633 SRCIN1Q9C0H9 1055 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 TRPV6Q9H1D0 765 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 AATFQ9NY61 560 aaKnown RBP eCLIP7.29□□□□□ -1.24
COL4A3-206ENST00000487633 PI4KBQ9UBF8 816 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 MUTYHQ9UIF7 546 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 SLC4A7Q9Y6M7 1214 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 TANC1Q9C0D5 1861 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 ROBO3Q96MS0 1386 aa7.29□□□□□ -1.24
COL4A3-206ENST00000487633 CACNA1HO95180 2353 aa7.28□□□□□ -1.24
COL4A3-206ENST00000487633 FLT1P17948 1338 aa7.28□□□□□ -1.24
COL4A3-206ENST00000487633 NAV1Q8NEY1 1877 aa7.28□□□□□ -1.24
COL4A3-206ENST00000487633 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.28□□□□□ -1.24
COL4A3-206ENST00000487633 B4GALT4O60513 344 aa7.28□□□□□ -1.24
COL4A3-206ENST00000487633 ARP10275 920 aa7.28□□□□□ -1.24
COL4A3-206ENST00000487633 ALADP13716 330 aa7.28□□□□□ -1.24
COL4A3-206ENST00000487633 AKR1A1P14550 325 aa7.28□□□□□ -1.24
COL4A3-206ENST00000487633 IRS1P35568 1242 aa7.28□□□□□ -1.24
COL4A3-206ENST00000487633 VCPP55072 806 aaKnown RBP7.28□□□□□ -1.24
COL4A3-206ENST00000487633 PSMC6P62333 389 aa7.28□□□□□ -1.24
COL4A3-206ENST00000487633 DYNLL1P63167 89 aaKnown RBP7.28□□□□□ -1.24
COL4A3-206ENST00000487633 ZP2Q05996 745 aa7.28□□□□□ -1.24
COL4A3-206ENST00000487633 PLS1Q14651 629 aa7.28□□□□□ -1.24
COL4A3-206ENST00000487633 TMEM132BQ14DG7 1078 aa7.28□□□□□ -1.24
COL4A3-206ENST00000487633 RAB3GAP1Q15042 981 aa7.28□□□□□ -1.24
COL4A3-206ENST00000487633 DEFB128Q7Z7B8 93 aa7.28□□□□□ -1.24
COL4A3-206ENST00000487633 FGD4Q96M96 766 aa7.28□□□□□ -1.24
COL4A3-206ENST00000487633 USP44Q9H0E7 712 aa7.28□□□□□ -1.24
COL4A3-206ENST00000487633 KCNH6Q9H252 994 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms