RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 SPRED2Q7Z698 418 aa8.33□□□□□ -1.08
CUL3-211ENST00000487558 ISL2Q96A47 359 aa8.33□□□□□ -1.08
CUL3-211ENST00000487558 SLKQ9H2G2 1235 aaPredicted RBP8.33□□□□□ -1.08
CUL3-211ENST00000487558 FANCLQ9NW38 375 aa8.33□□□□□ -1.08
CUL3-211ENST00000487558 PCOLCE2Q9UKZ9 415 aa8.33□□□□□ -1.08
CUL3-211ENST00000487558 PCDHB10Q9UN67 800 aa8.33□□□□□ -1.08
CUL3-211ENST00000487558 PAPLNO95428 1278 aa8.32□□□□□ -1.08
CUL3-211ENST00000487558 CST3P01034 146 aaPredicted RBP8.32□□□□□ -1.08
CUL3-211ENST00000487558 NEFMP07197 916 aa8.32□□□□□ -1.08
CUL3-211ENST00000487558 NAT2P11245 290 aa8.32□□□□□ -1.08
CUL3-211ENST00000487558 POLR2BP30876 1174 aaKnown RBP8.32□□□□□ -1.08
CUL3-211ENST00000487558 SLBPQ14493 270 aaKnown RBP eCLIP8.32□□□□□ -1.08
CUL3-211ENST00000487558 NKG7Q16617 165 aa8.32□□□□□ -1.08
CUL3-211ENST00000487558 RNF187Q5TA31 235 aaPredicted RBP8.32□□□□□ -1.08
CUL3-211ENST00000487558 MRM1Q6IN84 353 aaKnown RBP8.32□□□□□ -1.08
CUL3-211ENST00000487558 SPATC1Q76KD6 591 aa8.32□□□□□ -1.08
CUL3-211ENST00000487558 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.32□□□□□ -1.08
CUL3-211ENST00000487558 SMYD4Q8IYR2 804 aaPredicted RBP8.32□□□□□ -1.08
CUL3-211ENST00000487558 ANKRD13AQ8IZ07 590 aa8.32□□□□□ -1.08
CUL3-211ENST00000487558 CYB5D2Q8WUJ1 264 aa8.32□□□□□ -1.08
CUL3-211ENST00000487558 FOXQ1Q9C009 403 aa8.32□□□□□ -1.08
CUL3-211ENST00000487558 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.32□□□□□ -1.08
CUL3-211ENST00000487558 LGR6Q9HBX8 967 aa8.32□□□□□ -1.08
CUL3-211ENST00000487558 CWC22Q9HCG8 908 aaKnown RBP8.32□□□□□ -1.08
CUL3-211ENST00000487558 PFDN2Q9UHV9 154 aa8.32□□□□□ -1.08
CUL3-211ENST00000487558 ZMYM5Q9UJ78 669 aa8.32□□□□□ -1.08
CUL3-211ENST00000487558 SLC5A6Q9Y289 635 aa8.32□□□□□ -1.08
CUL3-211ENST00000487558 IQCA1LA6NCM1 817 aa8.31□□□□□ -1.08
CUL3-211ENST00000487558 C8AP07357 584 aa8.31□□□□□ -1.08
CUL3-211ENST00000487558 PMS1P54277 932 aaKnown RBP8.31□□□□□ -1.08
CUL3-211ENST00000487558 JAG1P78504 1218 aa8.31□□□□□ -1.08
CUL3-211ENST00000487558 CYP27C1Q4G0S4 372 aa8.31□□□□□ -1.08
CUL3-211ENST00000487558 TAF7LQ5H9L4 462 aa8.31□□□□□ -1.08
CUL3-211ENST00000487558 LCE1DQ5T752 114 aa8.31□□□□□ -1.08
CUL3-211ENST00000487558 JMYQ8N9B5 988 aa8.31□□□□□ -1.08
CUL3-211ENST00000487558 MFSD2AQ8NA29 543 aa8.31□□□□□ -1.08
CUL3-211ENST00000487558 KLHL6Q8WZ60 621 aa8.31□□□□□ -1.08
CUL3-211ENST00000487558 SLC6A18Q96N87 628 aa8.31□□□□□ -1.08
CUL3-211ENST00000487558 DPH2Q9BQC3 489 aaPredicted RBP8.31□□□□□ -1.08
CUL3-211ENST00000487558 TMX1Q9H3N1 280 aa8.31□□□□□ -1.08
CUL3-211ENST00000487558 TMEM260Q9NX78 707 aa8.31□□□□□ -1.08
CUL3-211ENST00000487558 SUCOQ9UBS9 1254 aaKnown RBP8.31□□□□□ -1.08
CUL3-211ENST00000487558 ESYT3A0FGR9 886 aa8.3□□□□□ -1.08
CUL3-211ENST00000487558 SUSD5O60279 629 aa8.3□□□□□ -1.08
CUL3-211ENST00000487558 CLEC3AO75596 197 aa8.3□□□□□ -1.08
CUL3-211ENST00000487558 LRIG2O94898 1065 aa8.3□□□□□ -1.08
CUL3-211ENST00000487558 ZNF143P52747 638 aaPredicted RBP8.3□□□□□ -1.08
CUL3-211ENST00000487558 PRAMEF13Q5VWM6 474 aa8.3□□□□□ -1.08
CUL3-211ENST00000487558 ZNF574Q6ZN55 896 aaPredicted RBP8.3□□□□□ -1.08
CUL3-211ENST00000487558 TMEM192Q8IY95 271 aa8.3□□□□□ -1.08
CUL3-211ENST00000487558 STK11IPQ8N1F8 1099 aa8.3□□□□□ -1.08
CUL3-211ENST00000487558 LRRC47Q8N1G4 583 aaKnown RBP8.3□□□□□ -1.08
CUL3-211ENST00000487558 SMARCC1Q92922 1105 aaPredicted RBP8.3□□□□□ -1.08
CUL3-211ENST00000487558 KANSL2Q9H9L4 492 aa8.3□□□□□ -1.08
CUL3-211ENST00000487558 AGRPO00253 132 aa8.29□□□□□ -1.08
CUL3-211ENST00000487558 DIAPH1O60610 1272 aaKnown RBP8.29□□□□□ -1.08
CUL3-211ENST00000487558 UBOX5O94941 541 aa8.29□□□□□ -1.08
CUL3-211ENST00000487558 C16orf86Q6ZW13 317 aa8.29□□□□□ -1.08
CUL3-211ENST00000487558 BAHD1Q8TBE0 780 aaPredicted RBP8.29□□□□□ -1.08
CUL3-211ENST00000487558 SPATA9Q9BWV2 254 aa8.29□□□□□ -1.08
CUL3-211ENST00000487558 PPP1R12AO14974 1030 aaPredicted RBP8.28□□□□□ -1.08
CUL3-211ENST00000487558 BNIP3Q12983 259 aa8.28□□□□□ -1.08
CUL3-211ENST00000487558 CDK5R2Q13319 367 aa8.28□□□□□ -1.08
CUL3-211ENST00000487558 LONRF2Q1L5Z9 754 aa8.28□□□□□ -1.08
CUL3-211ENST00000487558 ZNF792Q3KQV3 632 aa8.28□□□□□ -1.08
CUL3-211ENST00000487558 ZC3H12BQ5HYM0 836 aaKnown RBP8.28□□□□□ -1.08
CUL3-211ENST00000487558 ZSWIM2Q8NEG5 633 aa8.28□□□□□ -1.08
CUL3-211ENST00000487558 MISP3Q96FF7 219 aa8.28□□□□□ -1.08
CUL3-211ENST00000487558 SGSM3Q96HU1 749 aa8.28□□□□□ -1.08
CUL3-211ENST00000487558 APBA2Q99767 749 aa8.28□□□□□ -1.08
CUL3-211ENST00000487558 ANKRD34BA5PLL1 514 aa8.27□□□□□ -1.09
CUL3-211ENST00000487558 TP53P04637 393 aaPredicted RBP8.27□□□□□ -1.09
CUL3-211ENST00000487558 FAM87AP0C7U9 286 aa8.27□□□□□ -1.09
CUL3-211ENST00000487558 IBSPP21815 317 aaPredicted RBP8.27□□□□□ -1.09
CUL3-211ENST00000487558 SQSTM1Q13501 440 aa8.27□□□□□ -1.09
CUL3-211ENST00000487558 PLCL1Q15111 1095 aa8.27□□□□□ -1.09
CUL3-211ENST00000487558 SLC10A6Q3KNW5 377 aa8.27□□□□□ -1.09
CUL3-211ENST00000487558 SV2CQ496J9 727 aa8.27□□□□□ -1.09
CUL3-211ENST00000487558 HEATR6Q6AI08 1181 aaKnown RBP8.27□□□□□ -1.09
CUL3-211ENST00000487558 ARMCX6Q7L4S7 300 aa8.27□□□□□ -1.09
CUL3-211ENST00000487558 UBE3DQ7Z6J8 389 aa8.27□□□□□ -1.09
CUL3-211ENST00000487558 PLD6Q8N2A8 252 aaKnown RBP8.27□□□□□ -1.09
CUL3-211ENST00000487558 SYNPOQ8N3V7 929 aa8.27□□□□□ -1.09
CUL3-211ENST00000487558 XAGE3Q8WTP9 111 aa8.27□□□□□ -1.09
CUL3-211ENST00000487558 SLC26A8Q96RN1 970 aa8.27□□□□□ -1.09
CUL3-211ENST00000487558 CEP131Q9UPN4 1083 aa8.27□□□□□ -1.09
CUL3-211ENST00000487558 PRKAB1Q9Y478 270 aa8.27□□□□□ -1.09
CUL3-211ENST00000487558 CARMIL2Q6F5E8 1435 aa8.27□□□□□ -1.09
CUL3-211ENST00000487558 TCEA2Q15560 299 aa8.26□□□□□ -1.09
CUL3-211ENST00000487558 CCDC144CPQ8IYA2 1237 aa8.26□□□□□ -1.09
CUL3-211ENST00000487558 FAM181AQ8N9Y4 354 aa8.26□□□□□ -1.09
CUL3-211ENST00000487558 ZBTB38Q8NAP3 1195 aaPredicted RBP8.26□□□□□ -1.09
CUL3-211ENST00000487558 ZCRB1Q8TBF4 217 aaKnown RBP8.26□□□□□ -1.09
CUL3-211ENST00000487558 NETO1Q8TDF5 533 aa8.26□□□□□ -1.09
CUL3-211ENST00000487558 KRTAP4-7Q9BYR0 210 aa8.26□□□□□ -1.09
CUL3-211ENST00000487558 PTCH2Q9Y6C5 1203 aa8.26□□□□□ -1.09
CUL3-211ENST00000487558 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.26□□□□□ -1.09
CUL3-211ENST00000487558 U3KQE9 123 aa8.26□□□□□ -1.09
CUL3-211ENST00000487558 CCDC163A0A0D9SF12 145 aa8.25□□□□□ -1.09
CUL3-211ENST00000487558 FUT4P22083 530 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms