RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 REC8O95072 547 aa13.73□□□□□ -0.21
CLIP2-207ENST00000487447 SNHG28P0DPA3 235 aa13.73□□□□□ -0.21
CLIP2-207ENST00000487447 CTGFP29279 349 aa13.73□□□□□ -0.21
CLIP2-207ENST00000487447 DSG3P32926 999 aa13.73□□□□□ -0.21
CLIP2-207ENST00000487447 SEC23AQ15436 765 aa13.73□□□□□ -0.21
CLIP2-207ENST00000487447 CYB5R4Q7L1T6 521 aa13.73□□□□□ -0.21
CLIP2-207ENST00000487447 ENAHQ8N8S7 591 aaPredicted RBP13.73□□□□□ -0.21
CLIP2-207ENST00000487447 NCOA7Q8NI08 942 aa13.73□□□□□ -0.21
CLIP2-207ENST00000487447 CD99L2Q8TCZ2 262 aa13.73□□□□□ -0.21
CLIP2-207ENST00000487447 ZSCAN10Q96SZ4 725 aaPredicted RBP13.73□□□□□ -0.21
CLIP2-207ENST00000487447 TXNRD2Q9NNW7 524 aa13.73□□□□□ -0.21
CLIP2-207ENST00000487447 RABGAP1Q9Y3P9 1069 aa13.73□□□□□ -0.21
CLIP2-207ENST00000487447 GNRH1P01148 92 aa13.72□□□□□ -0.21
CLIP2-207ENST00000487447 HSPA4P34932 840 aa13.72□□□□□ -0.21
CLIP2-207ENST00000487447 TRDNQ13061 729 aa13.72□□□□□ -0.21
CLIP2-207ENST00000487447 FAM83BQ5T0W9 1011 aa13.72□□□□□ -0.21
CLIP2-207ENST00000487447 RNF20Q5VTR2 975 aa13.72□□□□□ -0.21
CLIP2-207ENST00000487447 SLFN13Q68D06 897 aa13.72□□□□□ -0.21
CLIP2-207ENST00000487447 ANKRD13CQ8N6S4 541 aa13.72□□□□□ -0.21
CLIP2-207ENST00000487447 TANGO6Q9C0B7 1094 aa13.72□□□□□ -0.21
CLIP2-207ENST00000487447 HOXC10Q9NYD6 342 aa13.72□□□□□ -0.21
CLIP2-207ENST00000487447 PPP1R9AQ9ULJ8 1098 aa13.72□□□□□ -0.21
CLIP2-207ENST00000487447 HTTP42858 3142 aa13.71□□□□□ -0.21
CLIP2-207ENST00000487447 BMP3P12645 472 aa13.71□□□□□ -0.21
CLIP2-207ENST00000487447 ANTXR2P58335 489 aa13.71□□□□□ -0.21
CLIP2-207ENST00000487447 ERVK-9P63128 1117 aa13.71□□□□□ -0.21
CLIP2-207ENST00000487447 ERVK-24P63145 666 aa13.71□□□□□ -0.21
CLIP2-207ENST00000487447 OTOP1Q7RTM1 612 aa13.71□□□□□ -0.21
CLIP2-207ENST00000487447 RALYLQ86SE5 291 aaKnown RBP13.71□□□□□ -0.21
CLIP2-207ENST00000487447 MB21D1Q8N884 522 aa13.71□□□□□ -0.21
CLIP2-207ENST00000487447 REPS2Q8NFH8 660 aa13.71□□□□□ -0.21
CLIP2-207ENST00000487447 DCAF4Q8WV16 495 aa13.71□□□□□ -0.21
CLIP2-207ENST00000487447 TRIM47Q96LD4 638 aa13.71□□□□□ -0.21
CLIP2-207ENST00000487447 NUP88Q99567 741 aaPredicted RBP13.71□□□□□ -0.21
CLIP2-207ENST00000487447 ZKSCAN3Q9BRR0 538 aa13.71□□□□□ -0.21
CLIP2-207ENST00000487447 FBXO28Q9NVF7 368 aa13.71□□□□□ -0.21
CLIP2-207ENST00000487447 BTBD7Q9P203 1132 aa13.71□□□□□ -0.21
CLIP2-207ENST00000487447 TRIM17Q9Y577 477 aa13.71□□□□□ -0.21
CLIP2-207ENST00000487447 TNRC18O15417 2968 aaPredicted RBP13.71□□□□□ -0.22
CLIP2-207ENST00000487447 WDR19Q8NEZ3 1342 aa13.7□□□□□ -0.22
CLIP2-207ENST00000487447 FLOT1O75955 427 aa13.7□□□□□ -0.22
CLIP2-207ENST00000487447 PDHBP11177 359 aa13.7□□□□□ -0.22
CLIP2-207ENST00000487447 PRMT2P55345 433 aa13.7□□□□□ -0.22
CLIP2-207ENST00000487447 COL9A3Q14050 684 aaPredicted RBP13.7□□□□□ -0.22
CLIP2-207ENST00000487447 ARHGEF6Q15052 776 aa13.7□□□□□ -0.22
CLIP2-207ENST00000487447 BTNL9Q6UXG8 535 aa13.7□□□□□ -0.22
CLIP2-207ENST00000487447 RASEFQ8IZ41 740 aa13.7□□□□□ -0.22
CLIP2-207ENST00000487447 GPRC5AQ8NFJ5 357 aa13.7□□□□□ -0.22
CLIP2-207ENST00000487447 ATG4CQ96DT6 458 aa13.7□□□□□ -0.22
CLIP2-207ENST00000487447 SLF1Q9BQI6 1058 aa13.7□□□□□ -0.22
CLIP2-207ENST00000487447 UBAC1Q9BSL1 405 aa13.7□□□□□ -0.22
CLIP2-207ENST00000487447 ARHGAP39Q9C0H5 1083 aa13.7□□□□□ -0.22
CLIP2-207ENST00000487447 FEM1BQ9UK73 627 aa13.7□□□□□ -0.22
CLIP2-207ENST00000487447 VWA5AO00534 786 aa13.69□□□□□ -0.22
CLIP2-207ENST00000487447 ATP2A1O14983 1001 aa13.69□□□□□ -0.22
CLIP2-207ENST00000487447 SLC1A4P43007 532 aa13.69□□□□□ -0.22
CLIP2-207ENST00000487447 FCGRTP55899 365 aa13.69□□□□□ -0.22
CLIP2-207ENST00000487447 KRT32Q14532 448 aa13.69□□□□□ -0.22
CLIP2-207ENST00000487447 KIF22Q14807 665 aa13.69□□□□□ -0.22
CLIP2-207ENST00000487447 Q3C1V9 767 aa13.69□□□□□ -0.22
CLIP2-207ENST00000487447 PRPF38BQ5VTL8 546 aaKnown RBP13.69□□□□□ -0.22
CLIP2-207ENST00000487447 RASGRP2Q7LDG7 609 aa13.69□□□□□ -0.22
CLIP2-207ENST00000487447 FAM160B2Q86V87 743 aa13.69□□□□□ -0.22
CLIP2-207ENST00000487447 PRPF38AQ8NAV1 312 aaKnown RBP13.69□□□□□ -0.22
CLIP2-207ENST00000487447 PNMA1Q8ND90 353 aa13.69□□□□□ -0.22
CLIP2-207ENST00000487447 SHCBP1Q8NEM2 672 aa13.69□□□□□ -0.22
CLIP2-207ENST00000487447 IGDCC4Q8TDY8 1250 aa13.69□□□□□ -0.22
CLIP2-207ENST00000487447 USP26Q9BXU7 913 aa13.69□□□□□ -0.22
CLIP2-207ENST00000487447 EFCC1Q9HA90 598 aa13.69□□□□□ -0.22
CLIP2-207ENST00000487447 ZNF214Q9UL59 606 aaPredicted RBP13.69□□□□□ -0.22
CLIP2-207ENST00000487447 PEX10O60683 326 aa13.68□□□□□ -0.22
CLIP2-207ENST00000487447 FDX1P10109 184 aa13.68□□□□□ -0.22
CLIP2-207ENST00000487447 ZKSCAN1P17029 563 aaPredicted RBP13.68□□□□□ -0.22
CLIP2-207ENST00000487447 MCCP23508 829 aa13.68□□□□□ -0.22
CLIP2-207ENST00000487447 MCM5P33992 734 aa13.68□□□□□ -0.22
CLIP2-207ENST00000487447 PSMC4P43686 418 aa13.68□□□□□ -0.22
CLIP2-207ENST00000487447 STAT2P52630 851 aa13.68□□□□□ -0.22
CLIP2-207ENST00000487447 ZNF543Q08ER8 600 aa13.68□□□□□ -0.22
CLIP2-207ENST00000487447 TMEM132BQ14DG7 1078 aa13.68□□□□□ -0.22
CLIP2-207ENST00000487447 IL17RAQ96F46 866 aa13.68□□□□□ -0.22
CLIP2-207ENST00000487447 TMEM87BQ96K49 555 aa13.68□□□□□ -0.22
CLIP2-207ENST00000487447 KAT14Q9H8E8 782 aa13.68□□□□□ -0.22
CLIP2-207ENST00000487447 SLC38A10Q9HBR0 1119 aa13.68□□□□□ -0.22
CLIP2-207ENST00000487447 PTPN22Q9Y2R2 807 aa13.68□□□□□ -0.22
CLIP2-207ENST00000487447 SNX14Q9Y5W7 946 aa13.68□□□□□ -0.22
CLIP2-207ENST00000487447 RBBP6Q7Z6E9 1792 aaKnown RBP13.68□□□□□ -0.22
CLIP2-207ENST00000487447 PRC1O43663 620 aa13.67□□□□□ -0.22
CLIP2-207ENST00000487447 EIF5BO60841 1220 aaKnown RBP13.67□□□□□ -0.22
CLIP2-207ENST00000487447 MAPK4P31152 587 aa13.67□□□□□ -0.22
CLIP2-207ENST00000487447 LIFRP42702 1097 aa13.67□□□□□ -0.22
CLIP2-207ENST00000487447 OAZ1P54368 228 aa13.67□□□□□ -0.22
CLIP2-207ENST00000487447 CCNA1P78396 465 aa13.67□□□□□ -0.22
CLIP2-207ENST00000487447 EXOSC10Q01780 885 aaKnown RBP13.67□□□□□ -0.22
CLIP2-207ENST00000487447 ADCK5Q3MIX3 580 aa13.67□□□□□ -0.22
CLIP2-207ENST00000487447 GPATCH4Q5T3I0 446 aaKnown RBP13.67□□□□□ -0.22
CLIP2-207ENST00000487447 IFIT1BQ5T764 474 aaKnown RBP13.67□□□□□ -0.22
CLIP2-207ENST00000487447 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.67□□□□□ -0.22
CLIP2-207ENST00000487447 CHURC1Q8WUH1 139 aa13.67□□□□□ -0.22
CLIP2-207ENST00000487447 NEK1Q96PY6 1258 aa13.67□□□□□ -0.22
CLIP2-207ENST00000487447 PAGR1Q9BTK6 254 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms