RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 CTR9Q6PD62 1173 aa19.51■□□□□ 0.71
SRRT-212ENST00000487311 SH3RF1Q7Z6J0 888 aa19.51■□□□□ 0.71
SRRT-212ENST00000487311 FERMT2Q96AC1 680 aa19.51■□□□□ 0.71
SRRT-212ENST00000487311 CCDC17Q96LX7 622 aa19.51■□□□□ 0.71
SRRT-212ENST00000487311 FAM161BQ96MY7 647 aa19.51■□□□□ 0.71
SRRT-212ENST00000487311 GUCD1Q96NT3 240 aa19.51■□□□□ 0.71
SRRT-212ENST00000487311 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.51■□□□□ 0.71
SRRT-212ENST00000487311 SLC4A4Q9Y6R1 1079 aa19.51■□□□□ 0.71
SRRT-212ENST00000487311 WDR46O15213 610 aaKnown RBP19.5■□□□□ 0.71
SRRT-212ENST00000487311 SMARCA5O60264 1052 aaPredicted RBP19.5■□□□□ 0.71
SRRT-212ENST00000487311 PGK2P07205 417 aa19.5■□□□□ 0.71
SRRT-212ENST00000487311 FCER1AP12319 257 aa19.5■□□□□ 0.71
SRRT-212ENST00000487311 TAL1P17542 331 aaPredicted RBP19.5■□□□□ 0.71
SRRT-212ENST00000487311 UBE3CQ15386 1083 aa19.5■□□□□ 0.71
SRRT-212ENST00000487311 TRIM60Q495X7 471 aa19.5■□□□□ 0.71
SRRT-212ENST00000487311 FAM47AQ5JRC9 791 aa19.5■□□□□ 0.71
SRRT-212ENST00000487311 FAM109BQ6ICB4 259 aaPredicted RBP19.5■□□□□ 0.71
SRRT-212ENST00000487311 DDX19BQ9UMR2 479 aa19.5■□□□□ 0.71
SRRT-212ENST00000487311 EYSQ5T1H1 3165 aa19.5■□□□□ 0.71
SRRT-212ENST00000487311 PARP14Q460N5 1801 aa19.49■□□□□ 0.71
SRRT-212ENST00000487311 TRIM43BA6NCK2 446 aa19.49■□□□□ 0.71
SRRT-212ENST00000487311 KBTBD13C9JR72 458 aa19.49■□□□□ 0.71
SRRT-212ENST00000487311 MS4A1P11836 297 aa19.49■□□□□ 0.71
SRRT-212ENST00000487311 SNX17Q15036 470 aa19.49■□□□□ 0.71
SRRT-212ENST00000487311 C9orf50Q5SZB4 431 aa19.49■□□□□ 0.71
SRRT-212ENST00000487311 REPS2Q8NFH8 660 aa19.49■□□□□ 0.71
SRRT-212ENST00000487311 BADQ92934 168 aa19.49■□□□□ 0.71
SRRT-212ENST00000487311 TRIM43Q96BQ3 446 aaPredicted RBP19.49■□□□□ 0.71
SRRT-212ENST00000487311 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.49■□□□□ 0.712e-7■■□□□ 14
SRRT-212ENST00000487311 SLC5A4Q9NY91 659 aa19.49■□□□□ 0.71
SRRT-212ENST00000487311 PRKAG2Q9UGJ0 569 aa19.49■□□□□ 0.71
SRRT-212ENST00000487311 COL11A1P12107 1806 aaPredicted RBP19.48■□□□□ 0.71
SRRT-212ENST00000487311 VWA5AO00534 786 aa19.48■□□□□ 0.71
SRRT-212ENST00000487311 SLC25A27O95847 323 aa19.48■□□□□ 0.71
SRRT-212ENST00000487311 ITGB8P26012 769 aa19.48■□□□□ 0.71
SRRT-212ENST00000487311 ZNF792Q3KQV3 632 aa19.48■□□□□ 0.71
SRRT-212ENST00000487311 RIOX2Q8IUF8 465 aa19.48■□□□□ 0.71
SRRT-212ENST00000487311 MMP19Q99542 508 aa19.48■□□□□ 0.71
SRRT-212ENST00000487311 SH2D4AQ9H788 454 aa19.48■□□□□ 0.71
SRRT-212ENST00000487311 KANSL2Q9H9L4 492 aa19.48■□□□□ 0.71
SRRT-212ENST00000487311 PRDM5Q9NQX1 630 aaPredicted RBP19.48■□□□□ 0.71
SRRT-212ENST00000487311 MYH8P13535 1937 aa19.48■□□□□ 0.71
SRRT-212ENST00000487311 LTBP2Q14767 1821 aa19.48■□□□□ 0.71
SRRT-212ENST00000487311 STAT3P40763 770 aa19.47■□□□□ 0.71
SRRT-212ENST00000487311 FAM83BQ5T0W9 1011 aa19.47■□□□□ 0.71
SRRT-212ENST00000487311 STK11IPQ8N1F8 1099 aa19.47■□□□□ 0.71
SRRT-212ENST00000487311 PDLIM7Q9NR12 457 aa19.47■□□□□ 0.71
SRRT-212ENST00000487311 ZNF214Q9UL59 606 aaPredicted RBP19.47■□□□□ 0.71
SRRT-212ENST00000487311 PPP1R9AQ9ULJ8 1098 aa19.47■□□□□ 0.71
SRRT-212ENST00000487311 PGK1P00558 417 aa19.46■□□□□ 0.71
SRRT-212ENST00000487311 ZNF865P0CJ78 1059 aaPredicted RBP19.46■□□□□ 0.71
SRRT-212ENST00000487311 C20orf194Q5TEA3 1177 aa19.46■□□□□ 0.71
SRRT-212ENST00000487311 STRBPQ96SI9 672 aaKnown RBP19.46■□□□□ 0.71
SRRT-212ENST00000487311 NUP88Q99567 741 aaPredicted RBP19.46■□□□□ 0.71
SRRT-212ENST00000487311 TINF2Q9BSI4 451 aa19.46■□□□□ 0.71
SRRT-212ENST00000487311 RAD21O60216 631 aa19.45■□□□□ 0.7
SRRT-212ENST00000487311 TLE2Q04725 743 aa19.45■□□□□ 0.7
SRRT-212ENST00000487311 C1orf53Q5VUE5 145 aa19.45■□□□□ 0.7
SRRT-212ENST00000487311 DIEXFQ68CQ4 756 aaKnown RBP19.45■□□□□ 0.7
SRRT-212ENST00000487311 LENG1Q96BZ8 264 aaPredicted RBP19.45■□□□□ 0.7
SRRT-212ENST00000487311 RIPK3Q9Y572 518 aa19.45■□□□□ 0.7
SRRT-212ENST00000487311 GSG1L2A8MUP6 293 aa19.44■□□□□ 0.7
SRRT-212ENST00000487311 RASA1P20936 1047 aa19.44■□□□□ 0.7
SRRT-212ENST00000487311 AMOTL1Q8IY63 956 aa19.44■□□□□ 0.7
SRRT-212ENST00000487311 GOPCQ9HD26 462 aa19.44■□□□□ 0.7
SRRT-212ENST00000487311 XPNPEP3Q9NQH7 507 aa19.44■□□□□ 0.7
SRRT-212ENST00000487311 PHF24Q9UPV7 400 aa19.44■□□□□ 0.7
SRRT-212ENST00000487311 DIS3Q9Y2L1 958 aaKnown RBP19.44■□□□□ 0.7
SRRT-212ENST00000487311 CDH23Q9H251 3354 aa19.43■□□□□ 0.7
SRRT-212ENST00000487311 RARBP10826 455 aa19.43■□□□□ 0.7
SRRT-212ENST00000487311 EPHB4P54760 987 aa19.43■□□□□ 0.7
SRRT-212ENST00000487311 OSBP2Q969R2 916 aa19.43■□□□□ 0.7
SRRT-212ENST00000487311 DDRGK1Q96HY6 314 aa19.43■□□□□ 0.7
SRRT-212ENST00000487311 LRRCC1Q9C099 1032 aa19.43■□□□□ 0.7
SRRT-212ENST00000487311 SEMA6BQ9H3T3 888 aa19.43■□□□□ 0.7
SRRT-212ENST00000487311 NRBP1Q9UHY1 535 aa19.43■□□□□ 0.7
SRRT-212ENST00000487311 F5H6K3 240 aa19.42■□□□□ 0.7
SRRT-212ENST00000487311 SNAI1O95863 264 aaPredicted RBP19.42■□□□□ 0.7
SRRT-212ENST00000487311 KLRC3Q07444 240 aa19.42■□□□□ 0.7
SRRT-212ENST00000487311 KCTD2Q14681 263 aa19.42■□□□□ 0.7
SRRT-212ENST00000487311 SBK1Q52WX2 424 aa19.42■□□□□ 0.7
SRRT-212ENST00000487311 ZNF697Q5TEC3 545 aa19.42■□□□□ 0.7
SRRT-212ENST00000487311 CDX2Q99626 313 aaPredicted RBP19.42■□□□□ 0.7
SRRT-212ENST00000487311 COL25A1Q9BXS0 654 aaPredicted RBP19.42■□□□□ 0.7
SRRT-212ENST00000487311 PLXNA1Q9UIW2 1896 aa19.41■□□□□ 0.7
SRRT-212ENST00000487311 MYH7P12883 1935 aa19.41■□□□□ 0.7
SRRT-212ENST00000487311 VCANP13611 3396 aa19.41■□□□□ 0.7
SRRT-212ENST00000487311 MINDY4BA8MYZ0 360 aa19.41■□□□□ 0.7
SRRT-212ENST00000487311 IRX5P78411 483 aaPredicted RBP19.41■□□□□ 0.7
SRRT-212ENST00000487311 TSHZ3Q63HK5 1081 aa19.41■□□□□ 0.7
SRRT-212ENST00000487311 ZSCAN25Q6NSZ9 544 aa19.41■□□□□ 0.7
SRRT-212ENST00000487311 TTYH1Q9H313 450 aaPredicted RBP19.41■□□□□ 0.7
SRRT-212ENST00000487311 NYAP2Q9P242 653 aa19.41■□□□□ 0.7
SRRT-212ENST00000487311 ARPP21Q9UBL0 812 aaPredicted RBP19.41■□□□□ 0.7
SRRT-212ENST00000487311 PRUNE2Q8WUY3 3088 aa19.4■□□□□ 0.7
SRRT-212ENST00000487311 A0A1W2PQ45 241 aaPredicted RBP19.4■□□□□ 0.7
SRRT-212ENST00000487311 A0A1W2PQY0 241 aa19.4■□□□□ 0.7
SRRT-212ENST00000487311 ADAMTS4O75173 837 aa19.4■□□□□ 0.7
SRRT-212ENST00000487311 NDUFB10O96000 172 aa19.4■□□□□ 0.7
SRRT-212ENST00000487311 RNF180Q86T96 592 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms