RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 URI1O94763 535 aaPredicted RBP13.98□□□□□ -0.17
PTCD2-204ENST00000486995 LDHBP07195 334 aaKnown RBP13.98□□□□□ -0.17
PTCD2-204ENST00000486995 H2AFXP16104 143 aaPredicted RBP13.98□□□□□ -0.17
PTCD2-204ENST00000486995 RBL2Q08999 1139 aa13.98□□□□□ -0.17
PTCD2-204ENST00000486995 VPS72Q15906 364 aa13.98□□□□□ -0.17
PTCD2-204ENST00000486995 GRIK5Q16478 980 aa13.98□□□□□ -0.17
PTCD2-204ENST00000486995 ARL6IP4Q66PJ3 421 aaKnown RBP13.98□□□□□ -0.17
PTCD2-204ENST00000486995 TYW1BQ6NUM6 668 aa13.98□□□□□ -0.17
PTCD2-204ENST00000486995 FAM177A1Q8N128 213 aaPredicted RBP13.98□□□□□ -0.17
PTCD2-204ENST00000486995 PANX2Q96RD6 677 aa13.98□□□□□ -0.17
PTCD2-204ENST00000486995 WDR24Q96S15 920 aa13.98□□□□□ -0.17
PTCD2-204ENST00000486995 LTBP4Q8N2S1 1624 aa13.97□□□□□ -0.17
PTCD2-204ENST00000486995 M0R2N6 131 aa13.97□□□□□ -0.17
PTCD2-204ENST00000486995 USP5P45974 858 aa13.97□□□□□ -0.17
PTCD2-204ENST00000486995 DMTNQ08495 405 aa13.97□□□□□ -0.17
PTCD2-204ENST00000486995 SLC35G1Q2M3R5 365 aa13.97□□□□□ -0.17
PTCD2-204ENST00000486995 IGSF22Q8N9C0 903 aa13.97□□□□□ -0.17
PTCD2-204ENST00000486995 WDR66Q8TBY9 1149 aa13.97□□□□□ -0.17
PTCD2-204ENST00000486995 CTAGE1Q96RT6 745 aa13.97□□□□□ -0.17
PTCD2-204ENST00000486995 PYM1Q9BRP8 204 aaKnown RBP13.97□□□□□ -0.17
PTCD2-204ENST00000486995 ANKIB1Q9P2G1 1089 aa13.97□□□□□ -0.17
PTCD2-204ENST00000486995 MAD2L2Q9UI95 211 aa13.97□□□□□ -0.17
PTCD2-204ENST00000486995 PRDM4Q9UKN5 801 aa13.97□□□□□ -0.17
PTCD2-204ENST00000486995 PCDHA4Q9UN74 947 aa13.97□□□□□ -0.17
PTCD2-204ENST00000486995 MAST2Q6P0Q8 1798 aa13.97□□□□□ -0.17
PTCD2-204ENST00000486995 USP17L3A6NCW0 530 aa13.97□□□□□ -0.17
PTCD2-204ENST00000486995 USP17L4A6NCW7 530 aa13.97□□□□□ -0.17
PTCD2-204ENST00000486995 GTPBP6O43824 516 aaPredicted RBP13.97□□□□□ -0.17
PTCD2-204ENST00000486995 COBLO75128 1261 aa13.97□□□□□ -0.17
PTCD2-204ENST00000486995 GRM4Q14833 912 aa13.97□□□□□ -0.17
PTCD2-204ENST00000486995 MTF1Q14872 753 aa13.97□□□□□ -0.17
PTCD2-204ENST00000486995 USP17L1Q7RTZ2 530 aa13.97□□□□□ -0.17
PTCD2-204ENST00000486995 DESI2Q9BSY9 194 aa13.97□□□□□ -0.17
PTCD2-204ENST00000486995 SRRTQ9BXP5 876 aaKnown RBP13.97□□□□□ -0.17
PTCD2-204ENST00000486995 ZNF446Q9NWS9 450 aa13.97□□□□□ -0.17
PTCD2-204ENST00000486995 FAM53CQ9NYF3 392 aa13.97□□□□□ -0.17
PTCD2-204ENST00000486995 CCNL1Q9UK58 526 aaPredicted RBP13.97□□□□□ -0.17
PTCD2-204ENST00000486995 CTNND2Q9UQB3 1225 aa13.97□□□□□ -0.17
PTCD2-204ENST00000486995 CDC25AP30304 524 aa13.96□□□□□ -0.17
PTCD2-204ENST00000486995 LONP1P36776 959 aaKnown RBP13.96□□□□□ -0.17
PTCD2-204ENST00000486995 NT5C2P49902 561 aa13.96□□□□□ -0.17
PTCD2-204ENST00000486995 GNG11P61952 73 aa13.96□□□□□ -0.17
PTCD2-204ENST00000486995 DIXDC1Q155Q3 683 aa13.96□□□□□ -0.17
PTCD2-204ENST00000486995 RASGRP4Q8TDF6 673 aa13.96□□□□□ -0.17
PTCD2-204ENST00000486995 CCDC88AQ3V6T2 1871 aa13.96□□□□□ -0.17
PTCD2-204ENST00000486995 LRRC10BA6NIK2 292 aa13.96□□□□□ -0.17
PTCD2-204ENST00000486995 SOWAHDA6NJG2 315 aa13.96□□□□□ -0.17
PTCD2-204ENST00000486995 PPP4CP60510 307 aa13.96□□□□□ -0.17
PTCD2-204ENST00000486995 NFIXQ14938 502 aa13.96□□□□□ -0.17
PTCD2-204ENST00000486995 RRAGBQ5VZM2 374 aa13.96□□□□□ -0.17
PTCD2-204ENST00000486995 MKNK2Q9HBH9 465 aa13.96□□□□□ -0.17
PTCD2-204ENST00000486995 LEMD3Q9Y2U8 911 aa13.96□□□□□ -0.17
PTCD2-204ENST00000486995 ROBO3Q96MS0 1386 aa13.96□□□□□ -0.18
PTCD2-204ENST00000486995 CYTH3O43739 400 aa13.95□□□□□ -0.18
PTCD2-204ENST00000486995 IGSF3O75054 1194 aa13.95□□□□□ -0.18
PTCD2-204ENST00000486995 CASQ1P31415 396 aa13.95□□□□□ -0.18
PTCD2-204ENST00000486995 PIP4K2BP78356 416 aa13.95□□□□□ -0.18
PTCD2-204ENST00000486995 GRAPQ13588 217 aa13.95□□□□□ -0.18
PTCD2-204ENST00000486995 ARHGAP29Q52LW3 1261 aa13.95□□□□□ -0.18
PTCD2-204ENST00000486995 UTP14CQ5TAP6 766 aaKnown RBP13.95□□□□□ -0.18
PTCD2-204ENST00000486995 PPFIBP1Q86W92 1011 aa13.95□□□□□ -0.18
PTCD2-204ENST00000486995 GRAPLQ8TC17 118 aaPredicted RBP13.95□□□□□ -0.18
PTCD2-204ENST00000486995 CPLX3Q8WVH0 158 aa13.95□□□□□ -0.18
PTCD2-204ENST00000486995 KIFC2Q96AC6 838 aa13.95□□□□□ -0.18
PTCD2-204ENST00000486995 C8orf37Q96NL8 207 aa13.95□□□□□ -0.18
PTCD2-204ENST00000486995 CARD6Q9BX69 1037 aa13.95□□□□□ -0.18
PTCD2-204ENST00000486995 MRPL44Q9H9J2 332 aaKnown RBP13.95□□□□□ -0.18
PTCD2-204ENST00000486995 TCP11L1Q9NUJ3 509 aa13.95□□□□□ -0.18
PTCD2-204ENST00000486995 RWDD2AQ9UIY3 292 aa13.95□□□□□ -0.18
PTCD2-204ENST00000486995 TADA3O75528 432 aa13.95□□□□□ -0.18
PTCD2-204ENST00000486995 MAP3K9P80192 1104 aa13.95□□□□□ -0.18
PTCD2-204ENST00000486995 FILIP1LQ4L180 1135 aa13.95□□□□□ -0.18
PTCD2-204ENST00000486995 ZNF658Q5TYW1 1059 aaPredicted RBP13.95□□□□□ -0.18
PTCD2-204ENST00000486995 RAD9BQ6WBX8 426 aa13.95□□□□□ -0.18
PTCD2-204ENST00000486995 SLC44A5Q8NCS7 719 aa13.95□□□□□ -0.18
PTCD2-204ENST00000486995 TGFBRAP1Q8WUH2 860 aa13.95□□□□□ -0.18
PTCD2-204ENST00000486995 NGLY1Q96IV0 654 aa13.95□□□□□ -0.18
PTCD2-204ENST00000486995 NAA15Q9BXJ9 866 aaKnown RBP13.95□□□□□ -0.18
PTCD2-204ENST00000486995 LIMA1Q9UHB6 759 aaKnown RBP13.95□□□□□ -0.18
PTCD2-204ENST00000486995 PCDHA6Q9UN73 950 aa13.95□□□□□ -0.18
PTCD2-204ENST00000486995 PCDHA8Q9Y5H6 950 aa13.95□□□□□ -0.18
PTCD2-204ENST00000486995 RPN1P04843 607 aaKnown RBP13.94□□□□□ -0.18
PTCD2-204ENST00000486995 TSPY3P0CV98 308 aa13.94□□□□□ -0.18
PTCD2-204ENST00000486995 TSPY8P0CW00 308 aa13.94□□□□□ -0.18
PTCD2-204ENST00000486995 GNAQP50148 359 aa13.94□□□□□ -0.18
PTCD2-204ENST00000486995 KRT31Q15323 416 aa13.94□□□□□ -0.18
PTCD2-204ENST00000486995 WWC2Q6AWC2 1192 aa13.94□□□□□ -0.18
PTCD2-204ENST00000486995 UBXN4Q92575 508 aa13.94□□□□□ -0.18
PTCD2-204ENST00000486995 GTPBP4Q9BZE4 634 aaKnown RBP13.94□□□□□ -0.18
PTCD2-204ENST00000486995 TNRC6CQ9HCJ0 1690 aaKnown RBP13.94□□□□□ -0.18
PTCD2-204ENST00000486995 MFAP3LO75121 409 aa13.94□□□□□ -0.18
PTCD2-204ENST00000486995 BAG3O95817 575 aa13.94□□□□□ -0.18
PTCD2-204ENST00000486995 GYPCP04921 128 aa13.94□□□□□ -0.18
PTCD2-204ENST00000486995 CASP14P31944 242 aa13.94□□□□□ -0.18
PTCD2-204ENST00000486995 GSTO1P78417 241 aa13.94□□□□□ -0.18
PTCD2-204ENST00000486995 KARSQ15046 597 aaKnown RBP13.94□□□□□ -0.18
PTCD2-204ENST00000486995 CCDC178Q5BJE1 867 aa13.94□□□□□ -0.18
PTCD2-204ENST00000486995 FAM182BQ5T319 152 aa13.94□□□□□ -0.18
PTCD2-204ENST00000486995 MNS1Q8NEH6 495 aa13.94□□□□□ -0.18
PTCD2-204ENST00000486995 GPR101Q96P66 508 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms