RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 ZSCAN29Q8IWY8 852 aaPredicted RBP13.36□□□□□ -0.27
PRKCB-207ENST00000486868 FSIP1Q8NA03 581 aa13.36□□□□□ -0.27
PRKCB-207ENST00000486868 DCAF4Q8WV16 495 aa13.36□□□□□ -0.27
PRKCB-207ENST00000486868 RRP36Q96EU6 259 aaKnown RBP13.36□□□□□ -0.27
PRKCB-207ENST00000486868 TNMDQ9H2S6 317 aa13.36□□□□□ -0.27
PRKCB-207ENST00000486868 GINM1Q9NU53 330 aa13.36□□□□□ -0.27
PRKCB-207ENST00000486868 CLIP2Q9UDT6 1046 aa13.36□□□□□ -0.27
PRKCB-207ENST00000486868 PCDHA4Q9UN74 947 aa13.36□□□□□ -0.27
PRKCB-207ENST00000486868 PCDHAC2Q9Y5I4 1007 aa13.36□□□□□ -0.27
PRKCB-207ENST00000486868 COL4A5P29400 1685 aa13.36□□□□□ -0.27
PRKCB-207ENST00000486868 TRIM75PA6NK02 468 aa13.35□□□□□ -0.27
PRKCB-207ENST00000486868 M0R2N6 131 aa13.35□□□□□ -0.27
PRKCB-207ENST00000486868 KINO60870 393 aaKnown RBP13.35□□□□□ -0.27
PRKCB-207ENST00000486868 GNA11P29992 359 aa13.35□□□□□ -0.27
PRKCB-207ENST00000486868 TCP10Q12799 353 aa13.35□□□□□ -0.27
PRKCB-207ENST00000486868 NR5A1Q13285 461 aa13.35□□□□□ -0.27
PRKCB-207ENST00000486868 SLC35G1Q2M3R5 365 aa13.35□□□□□ -0.27
PRKCB-207ENST00000486868 PPP1R18Q6NYC8 613 aa13.35□□□□□ -0.27
PRKCB-207ENST00000486868 BLIDQ8IZY5 108 aa13.35□□□□□ -0.27
PRKCB-207ENST00000486868 FMR1NBQ8N0W7 255 aaPredicted RBP13.35□□□□□ -0.27
PRKCB-207ENST00000486868 KRI1Q8N9T8 703 aaKnown RBP13.35□□□□□ -0.27
PRKCB-207ENST00000486868 GMCL1P1Q8NEA9 526 aa13.35□□□□□ -0.27
PRKCB-207ENST00000486868 MTMR8Q96EF0 704 aa13.35□□□□□ -0.27
PRKCB-207ENST00000486868 ZMYND12Q9H0C1 365 aa13.35□□□□□ -0.27
PRKCB-207ENST00000486868 RBSNQ9H1K0 784 aa13.35□□□□□ -0.27
PRKCB-207ENST00000486868 CABP5Q9NP86 173 aa13.35□□□□□ -0.27
PRKCB-207ENST00000486868 HPSEQ9Y251 543 aa13.35□□□□□ -0.27
PRKCB-207ENST00000486868 FER1L6Q2WGJ9 1857 aa13.34□□□□□ -0.27
PRKCB-207ENST00000486868 USP17L5A8MUK1 530 aa13.34□□□□□ -0.27
PRKCB-207ENST00000486868 STXBP3O00186 592 aa13.34□□□□□ -0.27
PRKCB-207ENST00000486868 EIF6P56537 245 aaKnown RBP13.34□□□□□ -0.27
PRKCB-207ENST00000486868 ORC2Q13416 577 aaPredicted RBP13.34□□□□□ -0.27
PRKCB-207ENST00000486868 ABCB5Q2M3G0 1257 aa13.34□□□□□ -0.27
PRKCB-207ENST00000486868 RESP18Q5W5W9 173 aa13.34□□□□□ -0.27
PRKCB-207ENST00000486868 USP17L2Q6R6M4 530 aa13.34□□□□□ -0.27
PRKCB-207ENST00000486868 OXER1Q8TDS5 423 aa13.34□□□□□ -0.27
PRKCB-207ENST00000486868 ANP32BQ92688 251 aaKnown RBP13.34□□□□□ -0.27
PRKCB-207ENST00000486868 FERMT2Q96AC1 680 aa13.34□□□□□ -0.27
PRKCB-207ENST00000486868 CSRNP1Q96S65 589 aa13.34□□□□□ -0.27
PRKCB-207ENST00000486868 GLT8D2Q9H1C3 349 aa13.34□□□□□ -0.27
PRKCB-207ENST00000486868 SEC63Q9UGP8 760 aaKnown RBP13.34□□□□□ -0.27
PRKCB-207ENST00000486868 BCS1LQ9Y276 419 aa13.34□□□□□ -0.27
PRKCB-207ENST00000486868 SRPRBQ9Y5M8 271 aaKnown RBP13.34□□□□□ -0.27
PRKCB-207ENST00000486868 GREB1LQ9C091 1923 aaPredicted RBP13.34□□□□□ -0.27
PRKCB-207ENST00000486868 MYH15Q9Y2K3 1946 aa13.34□□□□□ -0.27
PRKCB-207ENST00000486868 ECM29Q5VYK3 1845 aa13.34□□□□□ -0.27
PRKCB-207ENST00000486868 BRCA1P38398 1863 aaKnown RBP13.33□□□□□ -0.27
PRKCB-207ENST00000486868 TNNI2P48788 182 aa13.33□□□□□ -0.28
PRKCB-207ENST00000486868 CACNB3P54284 484 aa13.33□□□□□ -0.28
PRKCB-207ENST00000486868 TNFAIP1Q13829 316 aa13.33□□□□□ -0.28
PRKCB-207ENST00000486868 RBM26Q5T8P6 1007 aaKnown RBP13.33□□□□□ -0.28
PRKCB-207ENST00000486868 WWC2Q6AWC2 1192 aa13.33□□□□□ -0.28
PRKCB-207ENST00000486868 GMCL1Q96IK5 515 aa13.33□□□□□ -0.28
PRKCB-207ENST00000486868 GOLPH3LQ9H4A5 285 aa13.33□□□□□ -0.28
PRKCB-207ENST00000486868 SPON1Q9HCB6 807 aa13.33□□□□□ -0.28
PRKCB-207ENST00000486868 C6orf50Q9HD87 102 aa13.33□□□□□ -0.28
PRKCB-207ENST00000486868 MYOZ2Q9NPC6 264 aa13.33□□□□□ -0.28
PRKCB-207ENST00000486868 PGAP2Q9UHJ9 254 aa13.33□□□□□ -0.28
PRKCB-207ENST00000486868 ZBTB12Q9Y330 459 aaPredicted RBP13.33□□□□□ -0.28
PRKCB-207ENST00000486868 CNTNAP1P78357 1384 aa13.32□□□□□ -0.28
PRKCB-207ENST00000486868 PNMA6FA0A0J9YX94 578 aa13.32□□□□□ -0.28
PRKCB-207ENST00000486868 MPHOSPH10O00566 681 aaKnown RBP13.32□□□□□ -0.28
PRKCB-207ENST00000486868 WNT10BO00744 389 aa13.32□□□□□ -0.28
PRKCB-207ENST00000486868 EEF2P13639 858 aaKnown RBP13.32□□□□□ -0.28
PRKCB-207ENST00000486868 ICA1Q05084 483 aa13.32□□□□□ -0.28
PRKCB-207ENST00000486868 ARL6IP4Q66PJ3 421 aaKnown RBP13.32□□□□□ -0.28
PRKCB-207ENST00000486868 KRT25Q7Z3Z0 450 aa13.32□□□□□ -0.28
PRKCB-207ENST00000486868 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.32□□□□□ -0.28
PRKCB-207ENST00000486868 FBXO2Q9UK22 296 aaPredicted RBP13.32□□□□□ -0.28
PRKCB-207ENST00000486868 hCG_1642624A0A1W2PR95 340 aa13.31□□□□□ -0.28
PRKCB-207ENST00000486868 TCP10L2B9ZVM9 353 aa13.31□□□□□ -0.28
PRKCB-207ENST00000486868 LAD1O00515 517 aa13.31□□□□□ -0.28
PRKCB-207ENST00000486868 ZNF202O95125 648 aa13.31□□□□□ -0.28
PRKCB-207ENST00000486868 ATP2C1P98194 919 aaPredicted RBP13.31□□□□□ -0.28
PRKCB-207ENST00000486868 CCDC173Q0VFZ6 552 aa13.31□□□□□ -0.28
PRKCB-207ENST00000486868 TTC38Q5R3I4 469 aa13.31□□□□□ -0.28
PRKCB-207ENST00000486868 SHC4Q6S5L8 630 aa13.31□□□□□ -0.28
PRKCB-207ENST00000486868 SASS6Q6UVJ0 657 aa13.31□□□□□ -0.28
PRKCB-207ENST00000486868 BTNL9Q6UXG8 535 aa13.31□□□□□ -0.28
PRKCB-207ENST00000486868 SIAH1Q8IUQ4 282 aa13.31□□□□□ -0.28
PRKCB-207ENST00000486868 LRRC47Q8N1G4 583 aaKnown RBP13.31□□□□□ -0.28
PRKCB-207ENST00000486868 PPP1R9BQ96SB3 815 aa13.31□□□□□ -0.28
PRKCB-207ENST00000486868 PYM1Q9BRP8 204 aaKnown RBP13.31□□□□□ -0.28
PRKCB-207ENST00000486868 FAM13BQ9NYF5 915 aa13.31□□□□□ -0.28
PRKCB-207ENST00000486868 PCDHB6Q9Y5E3 794 aa13.31□□□□□ -0.28
PRKCB-207ENST00000486868 ADAMTSL1Q8N6G6 1762 aa13.3□□□□□ -0.28
PRKCB-207ENST00000486868 PLA2G6O60733 806 aa13.3□□□□□ -0.28
PRKCB-207ENST00000486868 GOLGA8HP0CJ92 632 aa13.3□□□□□ -0.28
PRKCB-207ENST00000486868 VEGFAP15692 232 aaPredicted RBP13.3□□□□□ -0.28
PRKCB-207ENST00000486868 PFKFB1P16118 471 aa13.3□□□□□ -0.28
PRKCB-207ENST00000486868 MARCKSP29966 332 aaPredicted RBP13.3□□□□□ -0.28
PRKCB-207ENST00000486868 SYKP43405 635 aa13.3□□□□□ -0.28
PRKCB-207ENST00000486868 NDUFA8P51970 172 aa13.3□□□□□ -0.28
PRKCB-207ENST00000486868 TYRO3Q06418 890 aa13.3□□□□□ -0.28
PRKCB-207ENST00000486868 TRAF1Q13077 416 aa13.3□□□□□ -0.28
PRKCB-207ENST00000486868 SEPT2Q15019 361 aa13.3□□□□□ -0.28
PRKCB-207ENST00000486868 SLFN13Q68D06 897 aa13.3□□□□□ -0.28
PRKCB-207ENST00000486868 MCTP2Q6DN12 878 aa13.3□□□□□ -0.28
PRKCB-207ENST00000486868 TYW1BQ6NUM6 668 aa13.3□□□□□ -0.28
PRKCB-207ENST00000486868 HEATR3Q7Z4Q2 680 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms