RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 SLC25A27O95847 323 aa22.56■■□□□ 1.2
GMDS-205ENST00000486793 SLC39A5Q6ZMH5 540 aa22.56■■□□□ 1.2
GMDS-205ENST00000486793 ADAMTS5Q9UNA0 930 aa22.56■■□□□ 1.2
GMDS-205ENST00000486793 STXBP5LQ9Y2K9 1186 aa22.56■■□□□ 1.2
GMDS-205ENST00000486793 KBTBD13C9JR72 458 aa22.55■■□□□ 1.2
GMDS-205ENST00000486793 SMARCA5O60264 1052 aaPredicted RBP22.55■■□□□ 1.2
GMDS-205ENST00000486793 ZSCAN25Q6NSZ9 544 aa22.55■■□□□ 1.2
GMDS-205ENST00000486793 LRRCC1Q9C099 1032 aa22.55■■□□□ 1.2
GMDS-205ENST00000486793 ADCYAP1R1P41586 468 aa22.54■■□□□ 1.2
GMDS-205ENST00000486793 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.54■■□□□ 1.2
GMDS-205ENST00000486793 RAD21O60216 631 aa22.53■■□□□ 1.2
GMDS-205ENST00000486793 PGK2P07205 417 aa22.53■■□□□ 1.2
GMDS-205ENST00000486793 STAT3P40763 770 aa22.53■■□□□ 1.2
GMDS-205ENST00000486793 LRRC41Q15345 812 aa22.53■■□□□ 1.2
GMDS-205ENST00000486793 RIOX2Q8IUF8 465 aa22.53■■□□□ 1.2
GMDS-205ENST00000486793 FERMT2Q96AC1 680 aa22.53■■□□□ 1.2
GMDS-205ENST00000486793 MMP19Q99542 508 aa22.53■■□□□ 1.2
GMDS-205ENST00000486793 RCAN3Q9UKA8 241 aa22.53■■□□□ 1.2
GMDS-205ENST00000486793 POTEB2H3BUK9 544 aa22.52■■□□□ 1.2
GMDS-205ENST00000486793 VWA5AO00534 786 aa22.52■■□□□ 1.2
GMDS-205ENST00000486793 FAM83BQ5T0W9 1011 aa22.52■■□□□ 1.2
GMDS-205ENST00000486793 C20orf194Q5TEA3 1177 aa22.52■■□□□ 1.2
GMDS-205ENST00000486793 STRBPQ96SI9 672 aaKnown RBP22.52■■□□□ 1.2
GMDS-205ENST00000486793 GOPCQ9HD26 462 aa22.52■■□□□ 1.2
GMDS-205ENST00000486793 PPP1R9AQ9ULJ8 1098 aa22.52■■□□□ 1.2
GMDS-205ENST00000486793 KCTD2Q14681 263 aa22.51■■□□□ 1.19
GMDS-205ENST00000486793 TRIM60Q495X7 471 aa22.51■■□□□ 1.19
GMDS-205ENST00000486793 FAM47AQ5JRC9 791 aa22.51■■□□□ 1.19
GMDS-205ENST00000486793 TINF2Q9BSI4 451 aa22.51■■□□□ 1.19
GMDS-205ENST00000486793 PRDM5Q9NQX1 630 aaPredicted RBP22.51■■□□□ 1.19
GMDS-205ENST00000486793 SNX17Q15036 470 aa22.5■■□□□ 1.19
GMDS-205ENST00000486793 ZNF792Q3KQV3 632 aa22.5■■□□□ 1.19
GMDS-205ENST00000486793 FAM109BQ6ICB4 259 aaPredicted RBP22.5■■□□□ 1.19
GMDS-205ENST00000486793 STK11IPQ8N1F8 1099 aa22.5■■□□□ 1.19
GMDS-205ENST00000486793 REPS2Q8NFH8 660 aa22.5■■□□□ 1.19
GMDS-205ENST00000486793 ECHDC1Q9NTX5 307 aa22.5■■□□□ 1.19
GMDS-205ENST00000486793 ARPP21Q9UBL0 812 aaPredicted RBP22.5■■□□□ 1.19
GMDS-205ENST00000486793 NRBP1Q9UHY1 535 aa22.5■■□□□ 1.19
GMDS-205ENST00000486793 ZNF214Q9UL59 606 aaPredicted RBP22.5■■□□□ 1.19
GMDS-205ENST00000486793 NAV1Q8NEY1 1877 aa22.49■■□□□ 1.19
GMDS-205ENST00000486793 LAMA2P24043 3122 aaKnown RBP22.49■■□□□ 1.19
GMDS-205ENST00000486793 CUL9Q8IWT3 2517 aa22.49■■□□□ 1.19
GMDS-205ENST00000486793 TAL1P17542 331 aaPredicted RBP22.49■■□□□ 1.19
GMDS-205ENST00000486793 SBK1Q52WX2 424 aa22.49■■□□□ 1.19
GMDS-205ENST00000486793 BADQ92934 168 aa22.49■■□□□ 1.19
GMDS-205ENST00000486793 NUP88Q99567 741 aaPredicted RBP22.49■■□□□ 1.19
GMDS-205ENST00000486793 MKNK2Q9HBH9 465 aa22.49■■□□□ 1.19
GMDS-205ENST00000486793 XPNPEP3Q9NQH7 507 aa22.49■■□□□ 1.19
GMDS-205ENST00000486793 DIS3Q9Y2L1 958 aaKnown RBP22.49■■□□□ 1.19
GMDS-205ENST00000486793 GSG1L2A8MUP6 293 aa22.48■■□□□ 1.19
GMDS-205ENST00000486793 MINDY4BA8MYZ0 360 aa22.48■■□□□ 1.19
GMDS-205ENST00000486793 RARBP10826 455 aa22.48■■□□□ 1.19
GMDS-205ENST00000486793 RASA1P20936 1047 aa22.48■■□□□ 1.19
GMDS-205ENST00000486793 SHHQ15465 462 aa22.48■■□□□ 1.19
GMDS-205ENST00000486793 SH3RF1Q7Z6J0 888 aa22.48■■□□□ 1.19
GMDS-205ENST00000486793 FAM161BQ96MY7 647 aa22.48■■□□□ 1.19
GMDS-205ENST00000486793 TRIM43BA6NCK2 446 aa22.47■■□□□ 1.19
GMDS-205ENST00000486793 F5H6K3 240 aa22.47■■□□□ 1.19
GMDS-205ENST00000486793 PGK1P00558 417 aa22.47■■□□□ 1.19
GMDS-205ENST00000486793 TLE2Q04725 743 aa22.47■■□□□ 1.19
GMDS-205ENST00000486793 KLRC3Q07444 240 aa22.47■■□□□ 1.19
GMDS-205ENST00000486793 C9orf50Q5SZB4 431 aa22.47■■□□□ 1.19
GMDS-205ENST00000486793 C1orf53Q5VUE5 145 aa22.47■■□□□ 1.19
GMDS-205ENST00000486793 OSBP2Q969R2 916 aa22.47■■□□□ 1.19
GMDS-205ENST00000486793 TRIM43Q96BQ3 446 aaPredicted RBP22.47■■□□□ 1.19
GMDS-205ENST00000486793 GUCD1Q96NT3 240 aa22.47■■□□□ 1.19
GMDS-205ENST00000486793 SLF1Q9BQI6 1058 aa22.47■■□□□ 1.19
GMDS-205ENST00000486793 PDLIM7Q9NR12 457 aa22.47■■□□□ 1.19
GMDS-205ENST00000486793 PHF24Q9UPV7 400 aa22.47■■□□□ 1.19
GMDS-205ENST00000486793 RLFQ13129 1914 aa22.47■■□□□ 1.19
GMDS-205ENST00000486793 ZNF865P0CJ78 1059 aaPredicted RBP22.46■■□□□ 1.19
GMDS-205ENST00000486793 GIMAP6Q6P9H5 292 aa22.46■■□□□ 1.19
GMDS-205ENST00000486793 RNF180Q86T96 592 aa22.46■■□□□ 1.19
GMDS-205ENST00000486793 KBTBD3Q8NAB2 608 aa22.46■■□□□ 1.19
GMDS-205ENST00000486793 NYAP2Q9P242 653 aa22.46■■□□□ 1.19
GMDS-205ENST00000486793 COPB2P35606 906 aa22.45■■□□□ 1.18
GMDS-205ENST00000486793 TSHZ3Q63HK5 1081 aa22.45■■□□□ 1.18
GMDS-205ENST00000486793 CLIP2Q9UDT6 1046 aa22.45■■□□□ 1.18
GMDS-205ENST00000486793 RIPK3Q9Y572 518 aa22.45■■□□□ 1.18
GMDS-205ENST00000486793 ZNF236Q9UL36 1845 aa22.45■■□□□ 1.18
GMDS-205ENST00000486793 A0A0G2JMZ2 1700 aa22.44■■□□□ 1.18
GMDS-205ENST00000486793 RNF113AO15541 343 aaKnown RBP22.44■■□□□ 1.18
GMDS-205ENST00000486793 NDUFB10O96000 172 aa22.44■■□□□ 1.18
GMDS-205ENST00000486793 SNRNP48Q6IEG0 339 aaKnown RBP22.44■■□□□ 1.18
GMDS-205ENST00000486793 PRPF38AQ8NAV1 312 aaKnown RBP22.44■■□□□ 1.18
GMDS-205ENST00000486793 APPBP2Q92624 585 aa22.44■■□□□ 1.18
GMDS-205ENST00000486793 TEX13BQ9BXU2 312 aa22.44■■□□□ 1.18
GMDS-205ENST00000486793 DCTPP1Q9H773 170 aa22.44■■□□□ 1.18
GMDS-205ENST00000486793 CNPY2Q9Y2B0 182 aa22.44■■□□□ 1.18
GMDS-205ENST00000486793 SLC4A3P48751 1232 aa22.43■■□□□ 1.18
GMDS-205ENST00000486793 LENG1Q96BZ8 264 aaPredicted RBP22.43■■□□□ 1.18
GMDS-205ENST00000486793 DDX11Q96FC9 970 aa22.43■■□□□ 1.18
GMDS-205ENST00000486793 TACC3Q9Y6A5 838 aa22.43■■□□□ 1.18
GMDS-205ENST00000486793 GPAA1O43292 621 aa22.42■■□□□ 1.18
GMDS-205ENST00000486793 PRDM1O75626 825 aa22.42■■□□□ 1.18
GMDS-205ENST00000486793 AKR1A1P14550 325 aa22.42■■□□□ 1.18
GMDS-205ENST00000486793 ITGB8P26012 769 aa22.42■■□□□ 1.18
GMDS-205ENST00000486793 ZNF444Q8N0Y2 327 aaPredicted RBP22.42■■□□□ 1.18
GMDS-205ENST00000486793 CPXCR1Q8N123 301 aa22.42■■□□□ 1.18
GMDS-205ENST00000486793 EPB41L4AQ9HCS5 686 aaPredicted RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms