RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 CIAPIN1Q6FI81 312 aa7.38□□□□□ -1.23
SMC4-218ENST00000486711 SYTL5Q8TDW5 730 aaPredicted RBP7.38□□□□□ -1.23
SMC4-218ENST00000486711 VWCEQ96DN2 955 aa7.38□□□□□ -1.23
SMC4-218ENST00000486711 INTS4Q96HW7 963 aaKnown RBP7.38□□□□□ -1.23
SMC4-218ENST00000486711 GPR160Q9UJ42 338 aa7.38□□□□□ -1.23
SMC4-218ENST00000486711 YBX2Q9Y2T7 364 aaKnown RBP7.38□□□□□ -1.23
SMC4-218ENST00000486711 SLC22A31A6NKX4 558 aa7.37□□□□□ -1.23
SMC4-218ENST00000486711 RECKO95980 971 aa7.37□□□□□ -1.23
SMC4-218ENST00000486711 EIF4A3P38919 411 aaKnown RBP7.37□□□□□ -1.23
SMC4-218ENST00000486711 MRPL58Q14197 206 aaKnown RBP7.37□□□□□ -1.23
SMC4-218ENST00000486711 FBXL19Q6PCT2 694 aa7.37□□□□□ -1.23
SMC4-218ENST00000486711 RNF111Q6ZNA4 994 aa7.37□□□□□ -1.23
SMC4-218ENST00000486711 HDAC8Q9BY41 377 aa7.37□□□□□ -1.23
SMC4-218ENST00000486711 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.37□□□□□ -1.23
SMC4-218ENST00000486711 GMIPQ9P107 970 aa7.37□□□□□ -1.23
SMC4-218ENST00000486711 SMG5Q9UPR3 1016 aaKnown RBP7.37□□□□□ -1.23
SMC4-218ENST00000486711 PCDHB14Q9Y5E9 798 aa7.37□□□□□ -1.23
SMC4-218ENST00000486711 UBOX5O94941 541 aa7.36□□□□□ -1.23
SMC4-218ENST00000486711 ATE1O95260 518 aa7.36□□□□□ -1.23
SMC4-218ENST00000486711 AMIGO3Q86WK7 504 aa7.36□□□□□ -1.23
SMC4-218ENST00000486711 TMEM87AQ8NBN3 555 aa7.36□□□□□ -1.23
SMC4-218ENST00000486711 DAGLBQ8NCG7 672 aa7.36□□□□□ -1.23
SMC4-218ENST00000486711 LINC01599Q8WXQ3 324 aa7.36□□□□□ -1.23
SMC4-218ENST00000486711 BACH2Q9BYV9 841 aa7.36□□□□□ -1.23
SMC4-218ENST00000486711 BRMS1Q9HCU9 246 aa7.36□□□□□ -1.23
SMC4-218ENST00000486711 COPRSQ9NQ92 184 aa7.36□□□□□ -1.23
SMC4-218ENST00000486711 ZNF281Q9Y2X9 895 aa7.36□□□□□ -1.23
SMC4-218ENST00000486711 GREM1O60565 184 aa7.35□□□□□ -1.23
SMC4-218ENST00000486711 PEX10O60683 326 aa7.35□□□□□ -1.23
SMC4-218ENST00000486711 SEMA7AO75326 666 aa7.35□□□□□ -1.23
SMC4-218ENST00000486711 PDE6BP35913 854 aa7.35□□□□□ -1.23
SMC4-218ENST00000486711 LINC00310P59036 64 aa7.35□□□□□ -1.23
SMC4-218ENST00000486711 RAD51AP2Q09MP3 1159 aa7.35□□□□□ -1.23
SMC4-218ENST00000486711 ZNF605Q86T29 641 aa7.35□□□□□ -1.23
SMC4-218ENST00000486711 MCOLN1Q9GZU1 580 aa7.35□□□□□ -1.23
SMC4-218ENST00000486711 EBF1Q9UH73 591 aa7.35□□□□□ -1.23
SMC4-218ENST00000486711 SCAMP3O14828 347 aaKnown RBP7.34□□□□□ -1.23
SMC4-218ENST00000486711 RPL10P27635 214 aaKnown RBP7.34□□□□□ -1.23
SMC4-218ENST00000486711 CDCP2Q5VXM1 449 aa7.34□□□□□ -1.23
SMC4-218ENST00000486711 OVOS1Q6IE37 1185 aa7.34□□□□□ -1.23
SMC4-218ENST00000486711 ZNF655Q8N720 491 aaPredicted RBP7.34□□□□□ -1.23
SMC4-218ENST00000486711 G6PC3Q9BUM1 346 aa7.34□□□□□ -1.23
SMC4-218ENST00000486711 IGSF5Q9NSI5 407 aa7.34□□□□□ -1.23
SMC4-218ENST00000486711 ZMYM5Q9UJ78 669 aa7.34□□□□□ -1.23
SMC4-218ENST00000486711 SSU72P8A0A1W2PR75 194 aa7.33□□□□□ -1.24
SMC4-218ENST00000486711 NUAK1O60285 661 aa7.33□□□□□ -1.24
SMC4-218ENST00000486711 PSPNO60542 156 aa7.33□□□□□ -1.24
SMC4-218ENST00000486711 PCBP3P57721 371 aaKnown RBP7.33□□□□□ -1.24
SMC4-218ENST00000486711 NBPF12Q5TAG4 269 aaPredicted RBP7.33□□□□□ -1.24
SMC4-218ENST00000486711 HS2ST1Q7LGA3 356 aa7.33□□□□□ -1.24
SMC4-218ENST00000486711 WAPLQ7Z5K2 1190 aa7.33□□□□□ -1.24
SMC4-218ENST00000486711 USHBP1Q8N6Y0 703 aa7.33□□□□□ -1.24
SMC4-218ENST00000486711 ZNF296Q8WUU4 475 aaPredicted RBP7.33□□□□□ -1.24
SMC4-218ENST00000486711 TCTN2Q96GX1 697 aa7.33□□□□□ -1.24
SMC4-218ENST00000486711 FOXP3Q9BZS1 431 aa7.33□□□□□ -1.24
SMC4-218ENST00000486711 ZNF552Q9H707 407 aaPredicted RBP7.33□□□□□ -1.24
SMC4-218ENST00000486711 EHMT1Q9H9B1 1298 aa7.33□□□□□ -1.24
SMC4-218ENST00000486711 GGT7Q9UJ14 662 aa7.33□□□□□ -1.24
SMC4-218ENST00000486711 TEX51A0A1B0GUA7 166 aa7.32□□□□□ -1.24
SMC4-218ENST00000486711 MYOCOSA0A1B0GUC4 107 aa7.32□□□□□ -1.24
SMC4-218ENST00000486711 CCNFP41002 786 aa7.32□□□□□ -1.24
SMC4-218ENST00000486711 KIR2DL1P43626 348 aaPredicted RBP7.32□□□□□ -1.24
SMC4-218ENST00000486711 KIR2DL2P43627 348 aaPredicted RBP7.32□□□□□ -1.24
SMC4-218ENST00000486711 DLG4P78352 724 aa7.32□□□□□ -1.24
SMC4-218ENST00000486711 NBPF9Q3BBW0 867 aa7.32□□□□□ -1.24
SMC4-218ENST00000486711 TMEM132EQ6IEE7 984 aa7.32□□□□□ -1.24
SMC4-218ENST00000486711 TMC3Q7Z5M5 1100 aa7.32□□□□□ -1.24
SMC4-218ENST00000486711 SHISA4Q96DD7 197 aa7.32□□□□□ -1.24
SMC4-218ENST00000486711 MAP6Q96JE9 813 aa7.32□□□□□ -1.24
SMC4-218ENST00000486711 KRTAP4-9Q9BYQ8 210 aa7.32□□□□□ -1.24
SMC4-218ENST00000486711 CNNM2Q9H8M5 875 aa7.32□□□□□ -1.24
SMC4-218ENST00000486711 RAPGEFL1Q9UHV5 662 aa7.32□□□□□ -1.24
SMC4-218ENST00000486711 TCFL5Q9UL49 500 aa7.32□□□□□ -1.24
SMC4-218ENST00000486711 OR14I1A6ND48 311 aa7.31□□□□□ -1.24
SMC4-218ENST00000486711 CLEC3AO75596 197 aa7.31□□□□□ -1.24
SMC4-218ENST00000486711 USP2O75604 605 aaPredicted RBP7.31□□□□□ -1.24
SMC4-218ENST00000486711 POLR2BP30876 1174 aaKnown RBP7.31□□□□□ -1.24
SMC4-218ENST00000486711 CRKP46108 304 aa7.31□□□□□ -1.24
SMC4-218ENST00000486711 SLC14A2Q15849 920 aa7.31□□□□□ -1.24
SMC4-218ENST00000486711 NLRC3Q7RTR2 1065 aa7.31□□□□□ -1.24
SMC4-218ENST00000486711 NLRX1Q86UT6 975 aa7.31□□□□□ -1.24
SMC4-218ENST00000486711 REXO1Q8N1G1 1221 aaKnown RBP7.31□□□□□ -1.24
SMC4-218ENST00000486711 LINC00116Q8NCU8 138 aa7.31□□□□□ -1.24
SMC4-218ENST00000486711 SIGLEC6O43699 453 aa7.3□□□□□ -1.24
SMC4-218ENST00000486711 NRDCO43847 1150 aa7.3□□□□□ -1.24
SMC4-218ENST00000486711 APOBRQ0VD83 1088 aa7.3□□□□□ -1.24
SMC4-218ENST00000486711 SEZ6Q53EL9 994 aa7.3□□□□□ -1.24
SMC4-218ENST00000486711 TTLL10Q6ZVT0 673 aa7.3□□□□□ -1.24
SMC4-218ENST00000486711 ATG4CQ96DT6 458 aa7.3□□□□□ -1.24
SMC4-218ENST00000486711 CRTAC1Q9NQ79 661 aa7.3□□□□□ -1.24
SMC4-218ENST00000486711 METTL5Q9NRN9 209 aaKnown RBP7.3□□□□□ -1.24
SMC4-218ENST00000486711 ADAMTS1Q9UHI8 967 aa7.3□□□□□ -1.24
SMC4-218ENST00000486711 NOTOA8MTQ0 251 aa7.29□□□□□ -1.24
SMC4-218ENST00000486711 PRAMEF1O95521 474 aa7.29□□□□□ -1.24
SMC4-218ENST00000486711 SYPP08247 313 aa7.29□□□□□ -1.24
SMC4-218ENST00000486711 ZNF165P49910 485 aa7.29□□□□□ -1.24
SMC4-218ENST00000486711 GALK1P51570 392 aa7.29□□□□□ -1.24
SMC4-218ENST00000486711 SNW1Q13573 536 aaKnown RBP7.29□□□□□ -1.24
SMC4-218ENST00000486711 LRRFIP1Q32MZ4 808 aaKnown RBP7.29□□□□□ -1.24
SMC4-218ENST00000486711 ADGRF1Q5T601 910 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms