RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 NPC1L1Q9UHC9 1359 aa8.51□□□□□ -1.05
TMEM39A-209ENST00000486235 GHRHP01286 108 aa8.51□□□□□ -1.05
TMEM39A-209ENST00000486235 PDIA4P13667 645 aaKnown RBP8.51□□□□□ -1.05
TMEM39A-209ENST00000486235 MYL6BP14649 208 aa8.51□□□□□ -1.05
TMEM39A-209ENST00000486235 FSTP19883 344 aa8.51□□□□□ -1.05
TMEM39A-209ENST00000486235 HOXA10P31260 410 aaPredicted RBP8.51□□□□□ -1.05
TMEM39A-209ENST00000486235 MAP2K2P36507 400 aa8.51□□□□□ -1.05
TMEM39A-209ENST00000486235 TAF7Q15545 349 aaPredicted RBP8.51□□□□□ -1.05
TMEM39A-209ENST00000486235 KIF6Q6ZMV9 814 aa8.51□□□□□ -1.05
TMEM39A-209ENST00000486235 AGGF1Q8N302 714 aaeCLIP8.51□□□□□ -1.05
TMEM39A-209ENST00000486235 C11orf16Q9NQ32 467 aa8.51□□□□□ -1.05
TMEM39A-209ENST00000486235 ADARB2Q9NS39 739 aaKnown RBP8.51□□□□□ -1.05
TMEM39A-209ENST00000486235 PCMTD2Q9NV79 361 aa8.51□□□□□ -1.05
TMEM39A-209ENST00000486235 GPRC5DQ9NZD1 345 aa8.51□□□□□ -1.05
TMEM39A-209ENST00000486235 ERVV-1B6SEH8 477 aa8.5□□□□□ -1.05
TMEM39A-209ENST00000486235 F8W735 103 aaPredicted RBP8.5□□□□□ -1.05
TMEM39A-209ENST00000486235 RGS19P49795 217 aa8.5□□□□□ -1.05
TMEM39A-209ENST00000486235 GMPSP49915 693 aaPredicted RBP8.5□□□□□ -1.05
TMEM39A-209ENST00000486235 CXCL9Q07325 125 aa8.5□□□□□ -1.05
TMEM39A-209ENST00000486235 RIC1Q4ADV7 1423 aa8.5□□□□□ -1.05
TMEM39A-209ENST00000486235 SAPCD2Q86UD0 394 aa8.5□□□□□ -1.05
TMEM39A-209ENST00000486235 DZIP1LQ8IYY4 767 aaKnown RBP8.5□□□□□ -1.05
TMEM39A-209ENST00000486235 CRAMP1Q96RY5 1269 aa8.5□□□□□ -1.05
TMEM39A-209ENST00000486235 MRPL18Q9H0U6 180 aaKnown RBP8.5□□□□□ -1.05
TMEM39A-209ENST00000486235 TMX4Q9H1E5 349 aaPredicted RBP8.5□□□□□ -1.05
TMEM39A-209ENST00000486235 C1orf115Q9H7X2 142 aa8.5□□□□□ -1.05
TMEM39A-209ENST00000486235 TRIM33Q9UPN9 1127 aa8.5□□□□□ -1.05
TMEM39A-209ENST00000486235 HTATSF1O43719 755 aaKnown RBP8.49□□□□□ -1.05
TMEM39A-209ENST00000486235 RAD17O75943 681 aa8.49□□□□□ -1.05
TMEM39A-209ENST00000486235 NTSR2O95665 410 aa8.49□□□□□ -1.05
TMEM39A-209ENST00000486235 EGFRP00533 1210 aa8.49□□□□□ -1.05
TMEM39A-209ENST00000486235 COX20Q5RI15 118 aa8.49□□□□□ -1.05
TMEM39A-209ENST00000486235 CIAPIN1Q6FI81 312 aa8.49□□□□□ -1.05
TMEM39A-209ENST00000486235 FAM200AQ8TCP9 573 aa8.49□□□□□ -1.05
TMEM39A-209ENST00000486235 PRIMPOLQ96LW4 560 aa8.49□□□□□ -1.05
TMEM39A-209ENST00000486235 THUMPD2Q9BTF0 503 aaKnown RBP8.49□□□□□ -1.05
TMEM39A-209ENST00000486235 BCL2L13Q9BXK5 485 aa8.49□□□□□ -1.05
TMEM39A-209ENST00000486235 ZNRF3Q9ULT6 936 aa8.49□□□□□ -1.05
TMEM39A-209ENST00000486235 KCNMB2Q9Y691 235 aa8.49□□□□□ -1.05
TMEM39A-209ENST00000486235 TRPM7Q96QT4 1865 aa8.49□□□□□ -1.05
TMEM39A-209ENST00000486235 IBTKQ9P2D0 1353 aaPredicted RBP8.48□□□□□ -1.05
TMEM39A-209ENST00000486235 SHTN1A0MZ66 631 aa8.48□□□□□ -1.05
TMEM39A-209ENST00000486235 CA12O43570 354 aa8.48□□□□□ -1.05
TMEM39A-209ENST00000486235 GLB1P16278 677 aa8.48□□□□□ -1.05
TMEM39A-209ENST00000486235 PPP2R1AP30153 589 aa8.48□□□□□ -1.05
TMEM39A-209ENST00000486235 EIF4A1P60842 406 aaKnown RBP8.48□□□□□ -1.05
TMEM39A-209ENST00000486235 SETDB1Q15047 1291 aa8.48□□□□□ -1.05
TMEM39A-209ENST00000486235 DLK2Q6UY11 383 aa8.48□□□□□ -1.05
TMEM39A-209ENST00000486235 ZNF34Q8IZ26 560 aa8.48□□□□□ -1.05
TMEM39A-209ENST00000486235 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.48□□□□□ -1.05
TMEM39A-209ENST00000486235 ATP6V0A2Q9Y487 856 aa8.48□□□□□ -1.05
TMEM39A-209ENST00000486235 ABCC4O15439 1325 aa8.48□□□□□ -1.05
TMEM39A-209ENST00000486235 CASP8AP2Q9UKL3 1982 aa8.48□□□□□ -1.05
TMEM39A-209ENST00000486235 LAMB4A4D0S4 1761 aa8.48□□□□□ -1.05
TMEM39A-209ENST00000486235 FKBP5Q13451 457 aaPredicted RBP8.47□□□□□ -1.05
TMEM39A-209ENST00000486235 DPP8Q6V1X1 898 aaPredicted RBP8.47□□□□□ -1.05
TMEM39A-209ENST00000486235 PPP1R42Q7Z4L9 355 aa8.47□□□□□ -1.05
TMEM39A-209ENST00000486235 USP48Q86UV5 1035 aa8.47□□□□□ -1.05
TMEM39A-209ENST00000486235 TMEM130Q8N3G9 435 aa8.47□□□□□ -1.05
TMEM39A-209ENST00000486235 SUPT20HQ8NEM7 779 aa8.47□□□□□ -1.05
TMEM39A-209ENST00000486235 PNISRQ8TF01 805 aaKnown RBP8.47□□□□□ -1.05
TMEM39A-209ENST00000486235 UTP14AQ9BVJ6 771 aaKnown RBP8.47□□□□□ -1.05
TMEM39A-209ENST00000486235 RBSNQ9H1K0 784 aa8.47□□□□□ -1.05
TMEM39A-209ENST00000486235 NUP98P52948 1817 aa8.47□□□□□ -1.05
TMEM39A-209ENST00000486235 PDE4DIPQ5VU43 2346 aa8.47□□□□□ -1.05
TMEM39A-209ENST00000486235 ANXA1P04083 346 aa8.46□□□□□ -1.06
TMEM39A-209ENST00000486235 HCLS1P14317 486 aaPredicted RBP8.46□□□□□ -1.06
TMEM39A-209ENST00000486235 EIF2S2P20042 333 aaKnown RBP8.46□□□□□ -1.06
TMEM39A-209ENST00000486235 RFX1P22670 979 aa8.46□□□□□ -1.06
TMEM39A-209ENST00000486235 CDC25BP30305 580 aa8.46□□□□□ -1.06
TMEM39A-209ENST00000486235 SOX10P56693 466 aa8.46□□□□□ -1.06
TMEM39A-209ENST00000486235 HUNKP57058 714 aa8.46□□□□□ -1.06
TMEM39A-209ENST00000486235 PARP10Q53GL7 1025 aa8.46□□□□□ -1.06
TMEM39A-209ENST00000486235 CDC37L1Q7L3B6 337 aa8.46□□□□□ -1.06
TMEM39A-209ENST00000486235 ZNF428Q96B54 188 aa8.46□□□□□ -1.06
TMEM39A-209ENST00000486235 HHIPL1Q96JK4 782 aa8.46□□□□□ -1.06
TMEM39A-209ENST00000486235 SAP130Q9H0E3 1048 aa8.46□□□□□ -1.06
TMEM39A-209ENST00000486235 PGAP2Q9UHJ9 254 aa8.46□□□□□ -1.06
TMEM39A-209ENST00000486235 CNOT7Q9UIV1 285 aaKnown RBP8.46□□□□□ -1.06
TMEM39A-209ENST00000486235 YDJCA8MPS7 323 aa8.45□□□□□ -1.06
TMEM39A-209ENST00000486235 H7C1D1 291 aa8.45□□□□□ -1.06
TMEM39A-209ENST00000486235 NEFMP07197 916 aa8.45□□□□□ -1.06
TMEM39A-209ENST00000486235 KIAA2012Q0VF49 1180 aa8.45□□□□□ -1.06
TMEM39A-209ENST00000486235 NOGQ13253 232 aa8.45□□□□□ -1.06
TMEM39A-209ENST00000486235 TNIP1Q15025 636 aa8.45□□□□□ -1.06
TMEM39A-209ENST00000486235 PROSER3Q2NL68 480 aa8.45□□□□□ -1.06
TMEM39A-209ENST00000486235 SLC10A5Q5PT55 438 aa8.45□□□□□ -1.06
TMEM39A-209ENST00000486235 TXNDC11Q6PKC3 985 aa8.45□□□□□ -1.06
TMEM39A-209ENST00000486235 ETFBKMTQ8IXQ9 262 aa8.45□□□□□ -1.06
TMEM39A-209ENST00000486235 SP8Q8IXZ3 490 aa8.45□□□□□ -1.06
TMEM39A-209ENST00000486235 RTFDC1Q9BY42 306 aaPredicted RBP8.45□□□□□ -1.06
TMEM39A-209ENST00000486235 VPS33BQ9H267 617 aa8.45□□□□□ -1.06
TMEM39A-209ENST00000486235 KDM3BQ7LBC6 1761 aa8.44□□□□□ -1.06
TMEM39A-209ENST00000486235 ADM5C9JUS6 153 aa8.44□□□□□ -1.06
TMEM39A-209ENST00000486235 LINC01387J3KSC0 135 aa8.44□□□□□ -1.06
TMEM39A-209ENST00000486235 PRMT3O60678 531 aa8.44□□□□□ -1.06
TMEM39A-209ENST00000486235 BBOX1O75936 387 aa8.44□□□□□ -1.06
TMEM39A-209ENST00000486235 TRIP4Q15650 581 aaPredicted RBP8.44□□□□□ -1.06
TMEM39A-209ENST00000486235 TBC1D10BQ4KMP7 808 aaPredicted RBP8.44□□□□□ -1.06
TMEM39A-209ENST00000486235 FAM26DQ5JW98 314 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms