RNA–Protein interactions for RNA: ENST00000486194.1

HLA-F-228, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 587 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-228ENST00000486194 SLC5A4Q9NY91 659 aa26.14■■□□□ 1.78
HLA-F-228ENST00000486194 CLIP2Q9UDT6 1046 aa26.14■■□□□ 1.78
HLA-F-228ENST00000486194 ADAMTS5Q9UNA0 930 aa26.14■■□□□ 1.78
HLA-F-228ENST00000486194 PLIN4Q96Q06 1357 aa26.13■■□□□ 1.77
HLA-F-228ENST00000486194 TRIM6-TRIM34B2RNG4 842 aa26.13■■□□□ 1.77
HLA-F-228ENST00000486194 TTLL1O95922 423 aa26.13■■□□□ 1.77
HLA-F-228ENST00000486194 IGHDP01880 384 aa26.13■■□□□ 1.77
HLA-F-228ENST00000486194 FAM83BQ5T0W9 1011 aa26.13■■□□□ 1.77
HLA-F-228ENST00000486194 CCDC129Q6ZRS4 1044 aa26.13■■□□□ 1.77
HLA-F-228ENST00000486194 DPP9Q86TI2 863 aa26.13■■□□□ 1.77
HLA-F-228ENST00000486194 ABRAQ8N0Z2 381 aa26.13■■□□□ 1.77
HLA-F-228ENST00000486194 MKL1Q969V6 931 aa26.13■■□□□ 1.77
HLA-F-228ENST00000486194 MTMR4Q9NYA4 1195 aa26.13■■□□□ 1.77
HLA-F-228ENST00000486194 PPP1R9AQ9ULJ8 1098 aa26.13■■□□□ 1.77
HLA-F-228ENST00000486194 SUPT16HQ9Y5B9 1047 aaKnown RBP26.13■■□□□ 1.77
HLA-F-228ENST00000486194 MKI67P46013 3256 aaKnown RBP26.13■■□□□ 1.77
HLA-F-228ENST00000486194 F5H6K3 240 aa26.12■■□□□ 1.77
HLA-F-228ENST00000486194 COPB2P35606 906 aa26.12■■□□□ 1.77
HLA-F-228ENST00000486194 KLRC3Q07444 240 aa26.12■■□□□ 1.77
HLA-F-228ENST00000486194 MCMDC2Q4G0Z9 681 aa26.12■■□□□ 1.77
HLA-F-228ENST00000486194 NECAB2Q7Z6G3 386 aa26.12■■□□□ 1.77
HLA-F-228ENST00000486194 NCAPG2Q86XI2 1143 aa26.12■■□□□ 1.77
HLA-F-228ENST00000486194 NEDD1Q8NHV4 660 aa26.12■■□□□ 1.77
HLA-F-228ENST00000486194 CEP95Q96GE4 821 aa26.12■■□□□ 1.77
HLA-F-228ENST00000486194 RLFQ13129 1914 aa26.12■■□□□ 1.77
HLA-F-228ENST00000486194 ADORA2AP29274 412 aa26.11■■□□□ 1.77
HLA-F-228ENST00000486194 TMEM132BQ14DG7 1078 aa26.11■■□□□ 1.77
HLA-F-228ENST00000486194 RILPL2Q969X0 211 aa26.11■■□□□ 1.77
HLA-F-228ENST00000486194 OSBPL3Q9H4L5 887 aa26.11■■□□□ 1.77
HLA-F-228ENST00000486194 FBXO28Q9NVF7 368 aa26.11■■□□□ 1.77
HLA-F-228ENST00000486194 OGDHLQ9ULD0 1010 aa26.11■■□□□ 1.77
HLA-F-228ENST00000486194 NR2E3Q9Y5X4 410 aa26.11■■□□□ 1.77
HLA-F-228ENST00000486194 VWA5AO00534 786 aa26.1■■□□□ 1.77
HLA-F-228ENST00000486194 NDUFB10O96000 172 aa26.1■■□□□ 1.77
HLA-F-228ENST00000486194 TFAP4Q01664 338 aa26.1■■□□□ 1.77
HLA-F-228ENST00000486194 ALX1Q15699 326 aa26.1■■□□□ 1.77
HLA-F-228ENST00000486194 PAWRQ96IZ0 340 aaKnown RBP26.1■■□□□ 1.77
HLA-F-228ENST00000486194 SLF1Q9BQI6 1058 aa26.1■■□□□ 1.77
HLA-F-228ENST00000486194 FCER1AP12319 257 aa26.09■■□□□ 1.77
HLA-F-228ENST00000486194 MFAP1P55081 439 aaKnown RBP26.09■■□□□ 1.77
HLA-F-228ENST00000486194 RIOX2Q8IUF8 465 aa26.09■■□□□ 1.77
HLA-F-228ENST00000486194 PLEKHM2Q8IWE5 1019 aa26.09■■□□□ 1.77
HLA-F-228ENST00000486194 NPLOC4Q8TAT6 608 aa26.09■■□□□ 1.77
HLA-F-228ENST00000486194 ANAPC4Q9UJX5 808 aa26.09■■□□□ 1.77
HLA-F-228ENST00000486194 ZNF236Q9UL36 1845 aa26.09■■□□□ 1.77
HLA-F-228ENST00000486194 H0YGN5 161 aa26.08■■□□□ 1.77
HLA-F-228ENST00000486194 FOXP2O15409 715 aa26.08■■□□□ 1.77
HLA-F-228ENST00000486194 STAT3P40763 770 aa26.08■■□□□ 1.77
HLA-F-228ENST00000486194 FAM47AQ5JRC9 791 aa26.08■■□□□ 1.77
HLA-F-228ENST00000486194 OLFML2BQ68BL8 750 aa26.08■■□□□ 1.77
HLA-F-228ENST00000486194 PRPF38AQ8NAV1 312 aaKnown RBP26.08■■□□□ 1.77
HLA-F-228ENST00000486194 GMCL1P1Q8NEA9 526 aa26.08■■□□□ 1.77
HLA-F-228ENST00000486194 FAM227BQ96M60 508 aa26.08■■□□□ 1.77
HLA-F-228ENST00000486194 NBPF3Q9H094 633 aa26.08■■□□□ 1.77
HLA-F-228ENST00000486194 FLRT1Q9NZU1 646 aa26.08■■□□□ 1.77
HLA-F-228ENST00000486194 A0A0D9SFI3 127 aa26.07■■□□□ 1.76
HLA-F-228ENST00000486194 TSPY2A6NKD2 308 aa26.07■■□□□ 1.76
HLA-F-228ENST00000486194 MSCO60682 206 aa26.07■■□□□ 1.76
HLA-F-228ENST00000486194 CCND3P30281 292 aaPredicted RBP26.07■■□□□ 1.76
HLA-F-228ENST00000486194 VPS53Q5VIR6 699 aa26.07■■□□□ 1.76
HLA-F-228ENST00000486194 NUP88Q99567 741 aaPredicted RBP26.07■■□□□ 1.76
HLA-F-228ENST00000486194 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.07■■□□□ 1.76
HLA-F-228ENST00000486194 CTDP1Q9Y5B0 961 aaPredicted RBP26.07■■□□□ 1.76
HLA-F-228ENST00000486194 CTDSPL2Q05D32 466 aa26.06■■□□□ 1.76
HLA-F-228ENST00000486194 NMIQ13287 307 aaPredicted RBP26.06■■□□□ 1.76
HLA-F-228ENST00000486194 FEM1BQ9UK73 627 aa26.06■■□□□ 1.76
HLA-F-228ENST00000486194 ZNF214Q9UL59 606 aaPredicted RBP26.06■■□□□ 1.76
HLA-F-228ENST00000486194 ZMYM6O95789 1325 aa26.06■■□□□ 1.76
HLA-F-228ENST00000486194 PARP14Q460N5 1801 aa26.05■■□□□ 1.76
HLA-F-228ENST00000486194 EVI5O60447 810 aa26.05■■□□□ 1.76
HLA-F-228ENST00000486194 SLC34A2O95436 690 aa26.05■■□□□ 1.76
HLA-F-228ENST00000486194 KCTD2Q14681 263 aa26.05■■□□□ 1.76
HLA-F-228ENST00000486194 LRRC47Q8N1G4 583 aaKnown RBP26.05■■□□□ 1.76
HLA-F-228ENST00000486194 REPS2Q8NFH8 660 aa26.05■■□□□ 1.76
HLA-F-228ENST00000486194 DIS3LQ8TF46 1054 aaKnown RBP26.05■■□□□ 1.76
HLA-F-228ENST00000486194 MMP19Q99542 508 aa26.05■■□□□ 1.76
HLA-F-228ENST00000486194 TEX13BQ9BXU2 312 aa26.05■■□□□ 1.76
HLA-F-228ENST00000486194 CCDC171Q6TFL3 1326 aa26.05■■□□□ 1.76
HLA-F-228ENST00000486194 ZBED4O75132 1171 aa26.04■■□□□ 1.76
HLA-F-228ENST00000486194 FGAP02671 866 aa26.04■■□□□ 1.76
HLA-F-228ENST00000486194 HSPD1P10809 573 aaKnown RBP26.04■■□□□ 1.76
HLA-F-228ENST00000486194 SDSP20132 328 aa26.04■■□□□ 1.76
HLA-F-228ENST00000486194 CYP2C19P33261 490 aa26.04■■□□□ 1.76
HLA-F-228ENST00000486194 SLFN13Q68D06 897 aa26.04■■□□□ 1.76
HLA-F-228ENST00000486194 LHX8Q68G74 356 aa26.04■■□□□ 1.76
HLA-F-228ENST00000486194 C11orf49Q9H6J7 331 aa26.04■■□□□ 1.76
HLA-F-228ENST00000486194 HIP1O00291 1037 aa26.03■■□□□ 1.76
HLA-F-228ENST00000486194 ORC4O43929 436 aa26.03■■□□□ 1.76
HLA-F-228ENST00000486194 COBLO75128 1261 aa26.03■■□□□ 1.76
HLA-F-228ENST00000486194 IGHA2P01877 340 aa26.03■■□□□ 1.76
HLA-F-228ENST00000486194 FDX1P10109 184 aa26.03■■□□□ 1.76
HLA-F-228ENST00000486194 BMP3P12645 472 aa26.03■■□□□ 1.76
HLA-F-228ENST00000486194 CNGA1P29973 690 aa26.03■■□□□ 1.76
HLA-F-228ENST00000486194 DDX20Q9UHI6 824 aaKnown RBP26.03■■□□□ 1.76
HLA-F-228ENST00000486194 ATP2A1O14983 1001 aa26.02■■□□□ 1.76
HLA-F-228ENST00000486194 RANBP6O60518 1105 aaKnown RBP26.02■■□□□ 1.76
HLA-F-228ENST00000486194 HABP4Q5JVS0 413 aaKnown RBP26.02■■□□□ 1.76
HLA-F-228ENST00000486194 KIFC2Q96AC6 838 aa26.02■■□□□ 1.76
HLA-F-228ENST00000486194 STX8Q9UNK0 236 aa26.02■■□□□ 1.76
HLA-F-228ENST00000486194 FGRP09769 529 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms