RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 CCSAPQ6IQ19 270 aaPredicted RBP12.03□□□□□ -0.48
SND1-213ENST00000486037 FOXP4Q8IVH2 680 aaPredicted RBP12.03□□□□□ -0.48
SND1-213ENST00000486037 FRAT1Q92837 279 aaPredicted RBP12.03□□□□□ -0.48
SND1-213ENST00000486037 CRBNQ96SW2 442 aa12.03□□□□□ -0.48
SND1-213ENST00000486037 SPATC1LQ9H0A9 340 aa12.03□□□□□ -0.48
SND1-213ENST00000486037 GINM1Q9NU53 330 aa12.03□□□□□ -0.48
SND1-213ENST00000486037 RAI14Q9P0K7 980 aa12.03□□□□□ -0.48
SND1-213ENST00000486037 UMODL1Q5DID0 1318 aa12.03□□□□□ -0.48
SND1-213ENST00000486037 ZNFX1Q9P2E3 1918 aaKnown RBP12.02□□□□□ -0.49
SND1-213ENST00000486037 A0A1B0GUL7 405 aa12.02□□□□□ -0.49
SND1-213ENST00000486037 STRNO43815 780 aa12.02□□□□□ -0.49
SND1-213ENST00000486037 LDHCP07864 332 aa12.02□□□□□ -0.49
SND1-213ENST00000486037 CYP2C18P33260 490 aa12.02□□□□□ -0.49
SND1-213ENST00000486037 GUCY1A2P33402 732 aa12.02□□□□□ -0.49
SND1-213ENST00000486037 IL15P40933 162 aaPredicted RBP12.02□□□□□ -0.49
SND1-213ENST00000486037 CDK7P50613 346 aa12.02□□□□□ -0.49
SND1-213ENST00000486037 GSTO1P78417 241 aa12.02□□□□□ -0.49
SND1-213ENST00000486037 RAB3GAP1Q15042 981 aa12.02□□□□□ -0.49
SND1-213ENST00000486037 KIAA1755Q5JYT7 1200 aa12.02□□□□□ -0.49
SND1-213ENST00000486037 ERICH6BQ5W0A0 696 aa12.02□□□□□ -0.49
SND1-213ENST00000486037 PPP2R2DQ66LE6 453 aa12.02□□□□□ -0.49
SND1-213ENST00000486037 PSRC1Q6PGN9 363 aaPredicted RBP12.02□□□□□ -0.49
SND1-213ENST00000486037 EXOC6Q8TAG9 804 aa12.02□□□□□ -0.49
SND1-213ENST00000486037 ANKS1AQ92625 1134 aa12.02□□□□□ -0.49
SND1-213ENST00000486037 KIAA1683Q9H0B3 1180 aa12.02□□□□□ -0.49
SND1-213ENST00000486037 CERS4Q9HA82 394 aa12.02□□□□□ -0.49
SND1-213ENST00000486037 SYNRGQ9UMZ2 1314 aa12.02□□□□□ -0.49
SND1-213ENST00000486037 BRWD1Q9NSI6 2320 aa12.02□□□□□ -0.49
SND1-213ENST00000486037 APBB1O00213 710 aa12.01□□□□□ -0.49
SND1-213ENST00000486037 ARHGEF15O94989 841 aa12.01□□□□□ -0.49
SND1-213ENST00000486037 PGK2P07205 417 aa12.01□□□□□ -0.49
SND1-213ENST00000486037 KCNA10Q16322 511 aa12.01□□□□□ -0.49
SND1-213ENST00000486037 OTOP2Q7RTS6 562 aa12.01□□□□□ -0.49
SND1-213ENST00000486037 TMEM199Q8N511 208 aa12.01□□□□□ -0.49
SND1-213ENST00000486037 SPATA5Q8NB90 893 aa12.01□□□□□ -0.49
SND1-213ENST00000486037 SHCBP1Q8NEM2 672 aa12.01□□□□□ -0.49
SND1-213ENST00000486037 KLHDC9Q8NEP7 349 aa12.01□□□□□ -0.49
SND1-213ENST00000486037 VWCEQ96DN2 955 aa12.01□□□□□ -0.49
SND1-213ENST00000486037 TRIM34Q9BYJ4 488 aa12.01□□□□□ -0.49
SND1-213ENST00000486037 IL23AQ9NPF7 189 aa12.01□□□□□ -0.49
SND1-213ENST00000486037 FBXO3Q9UK99 471 aa12.01□□□□□ -0.49
SND1-213ENST00000486037 NOB1Q9ULX3 412 aaKnown RBP12.01□□□□□ -0.49
SND1-213ENST00000486037 ROBO3Q96MS0 1386 aa12.01□□□□□ -0.49
SND1-213ENST00000486037 A0A1W2PRG0 241 aa12□□□□□ -0.49
SND1-213ENST00000486037 PRR33A8MZF0 331 aa12□□□□□ -0.49
SND1-213ENST00000486037 RLBP1P12271 317 aa12□□□□□ -0.49
SND1-213ENST00000486037 MCAMP43121 646 aa12□□□□□ -0.49
SND1-213ENST00000486037 USP14P54578 494 aa12□□□□□ -0.49
SND1-213ENST00000486037 DYNLL1P63167 89 aaKnown RBP12□□□□□ -0.49
SND1-213ENST00000486037 TFCP2Q12800 502 aa12□□□□□ -0.49
SND1-213ENST00000486037 ZKSCAN2Q63HK3 967 aa12□□□□□ -0.49
SND1-213ENST00000486037 TATDN1Q6P1N9 297 aa12□□□□□ -0.49
SND1-213ENST00000486037 NCAPG2Q86XI2 1143 aa12□□□□□ -0.49
SND1-213ENST00000486037 PANK1Q8TE04 598 aa12□□□□□ -0.49
SND1-213ENST00000486037 FBXL18Q96ME1 805 aa12□□□□□ -0.49
SND1-213ENST00000486037 PHOX2BQ99453 314 aa12□□□□□ -0.49
SND1-213ENST00000486037 TSEN34Q9BSV6 310 aaKnown RBP12□□□□□ -0.49
SND1-213ENST00000486037 ADCY6O43306 1168 aa11.99□□□□□ -0.49
SND1-213ENST00000486037 FGBP02675 491 aa11.99□□□□□ -0.49
SND1-213ENST00000486037 POU3F3P20264 500 aaPredicted RBP11.99□□□□□ -0.49
SND1-213ENST00000486037 PLS1Q14651 629 aa11.99□□□□□ -0.49
SND1-213ENST00000486037 CCDC174Q6PII3 467 aa11.99□□□□□ -0.49
SND1-213ENST00000486037 SPRED2Q7Z698 418 aa11.99□□□□□ -0.49
SND1-213ENST00000486037 FAM126BQ8IXS8 530 aa11.99□□□□□ -0.49
SND1-213ENST00000486037 ABRAQ8N0Z2 381 aa11.99□□□□□ -0.49
SND1-213ENST00000486037 ATG4CQ96DT6 458 aa11.99□□□□□ -0.49
SND1-213ENST00000486037 TINF2Q9BSI4 451 aa11.99□□□□□ -0.49
SND1-213ENST00000486037 MYO5AQ9Y4I1 1855 aaKnown RBP11.99□□□□□ -0.49
SND1-213ENST00000486037 TRIOO75962 3097 aa11.99□□□□□ -0.49
SND1-213ENST00000486037 CACNA1AO00555 2505 aa11.98□□□□□ -0.49
SND1-213ENST00000486037 MOXD2PA6NHM9 499 aa11.98□□□□□ -0.49
SND1-213ENST00000486037 TRIM27P14373 513 aa11.98□□□□□ -0.49
SND1-213ENST00000486037 AKR1A1P14550 325 aa11.98□□□□□ -0.49
SND1-213ENST00000486037 ARID4AP29374 1257 aaPredicted RBP11.98□□□□□ -0.49
SND1-213ENST00000486037 PPP4CP60510 307 aa11.98□□□□□ -0.49
SND1-213ENST00000486037 EVX2Q03828 476 aa11.98□□□□□ -0.49
SND1-213ENST00000486037 COG2Q14746 738 aa11.98□□□□□ -0.49
SND1-213ENST00000486037 MVPQ14764 893 aaKnown RBP11.98□□□□□ -0.49
SND1-213ENST00000486037 ZNF792Q3KQV3 632 aa11.98□□□□□ -0.49
SND1-213ENST00000486037 ATF7IPQ6VMQ6 1270 aa11.98□□□□□ -0.49
SND1-213ENST00000486037 NUP133Q8WUM0 1156 aa11.98□□□□□ -0.49
SND1-213ENST00000486037 UIMC1Q96RL1 719 aa11.98□□□□□ -0.49
SND1-213ENST00000486037 COPRSQ9NQ92 184 aa11.98□□□□□ -0.49
SND1-213ENST00000486037 NRBP1Q9UHY1 535 aa11.98□□□□□ -0.49
SND1-213ENST00000486037 COG5Q9UP83 839 aa11.98□□□□□ -0.49
SND1-213ENST00000486037 C5orf42Q9H799 3197 aa11.98□□□□□ -0.49
SND1-213ENST00000486037 MYH1P12882 1939 aa11.98□□□□□ -0.49
SND1-213ENST00000486037 ARVCFO00192 962 aa11.97□□□□□ -0.49
SND1-213ENST00000486037 IPO8O15397 1037 aaKnown RBP11.97□□□□□ -0.49
SND1-213ENST00000486037 CD4P01730 458 aa11.97□□□□□ -0.49
SND1-213ENST00000486037 HLA-DOAP06340 250 aa11.97□□□□□ -0.49
SND1-213ENST00000486037 ASGR1P07306 291 aa11.97□□□□□ -0.49
SND1-213ENST00000486037 CA3P07451 260 aa11.97□□□□□ -0.49
SND1-213ENST00000486037 DSG3P32926 999 aa11.97□□□□□ -0.49
SND1-213ENST00000486037 CCL23P55773 120 aa11.97□□□□□ -0.49
SND1-213ENST00000486037 TMEM132BQ14DG7 1078 aa11.97□□□□□ -0.49
SND1-213ENST00000486037 SEPT2Q15019 361 aa11.97□□□□□ -0.49
SND1-213ENST00000486037 ABCB5Q2M3G0 1257 aa11.97□□□□□ -0.49
SND1-213ENST00000486037 NAA16Q6N069 864 aaPredicted RBP11.97□□□□□ -0.49
SND1-213ENST00000486037 HLA-CQ95604 372 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms