RNA–Protein interactions for RNA: ENST00000485680.1

SPTA1-207, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-207ENST00000485680 HMGXB3Q12766 1538 aa6.91□□□□□ -1.3
SPTA1-207ENST00000485680 LRRC10BA6NIK2 292 aa6.9□□□□□ -1.3
SPTA1-207ENST00000485680 RBAK-RBAKDNI3L0D1 243 aa6.9□□□□□ -1.3
SPTA1-207ENST00000485680 CST3P01034 146 aaPredicted RBP6.9□□□□□ -1.3
SPTA1-207ENST00000485680 RAG1P15918 1043 aa6.9□□□□□ -1.3
SPTA1-207ENST00000485680 LARP1BQ659C4 914 aaKnown RBP6.9□□□□□ -1.3
SPTA1-207ENST00000485680 UNC5AQ6ZN44 842 aa6.9□□□□□ -1.3
SPTA1-207ENST00000485680 ARMCX6Q7L4S7 300 aa6.9□□□□□ -1.3
SPTA1-207ENST00000485680 SLFN12Q8IYM2 578 aa6.9□□□□□ -1.3
SPTA1-207ENST00000485680 PHACTR4Q8IZ21 702 aa6.9□□□□□ -1.3
SPTA1-207ENST00000485680 C19orf47Q8N9M1 422 aaKnown RBP6.9□□□□□ -1.3
SPTA1-207ENST00000485680 FAM181AQ8N9Y4 354 aa6.9□□□□□ -1.3
SPTA1-207ENST00000485680 KCT2Q8NC54 265 aa6.9□□□□□ -1.3
SPTA1-207ENST00000485680 KIF2CQ99661 725 aa6.9□□□□□ -1.3
SPTA1-207ENST00000485680 ZSWIM4Q9H7M6 989 aa6.9□□□□□ -1.3
SPTA1-207ENST00000485680 ST7Q9NRC1 585 aa6.9□□□□□ -1.3
SPTA1-207ENST00000485680 WRNQ14191 1432 aaPredicted RBP eCLIP6.9□□□□□ -1.31
SPTA1-207ENST00000485680 ZNF503-AS2A6NEH8 195 aa6.89□□□□□ -1.31
SPTA1-207ENST00000485680 B2RBV5 119 aa6.89□□□□□ -1.31
SPTA1-207ENST00000485680 TNFRSF10CO14798 259 aa6.89□□□□□ -1.31
SPTA1-207ENST00000485680 CAP2P40123 477 aa6.89□□□□□ -1.31
SPTA1-207ENST00000485680 RAP1GAPP47736 663 aa6.89□□□□□ -1.31
SPTA1-207ENST00000485680 BMS1Q14692 1282 aaKnown RBP6.89□□□□□ -1.31
SPTA1-207ENST00000485680 SOGA3Q5TF21 947 aa6.89□□□□□ -1.31
SPTA1-207ENST00000485680 NBPF6Q5VWK0 638 aa6.89□□□□□ -1.31
SPTA1-207ENST00000485680 TAB3Q8N5C8 712 aaPredicted RBP6.89□□□□□ -1.31
SPTA1-207ENST00000485680 BAHD1Q8TBE0 780 aaPredicted RBP6.89□□□□□ -1.31
SPTA1-207ENST00000485680 NBPF4Q96M43 638 aa6.89□□□□□ -1.31
SPTA1-207ENST00000485680 FOXQ1Q9C009 403 aa6.89□□□□□ -1.31
SPTA1-207ENST00000485680 U3KQE9 123 aa6.89□□□□□ -1.31
SPTA1-207ENST00000485680 LTBP3Q9NS15 1303 aa6.89□□□□□ -1.31
SPTA1-207ENST00000485680 CCDC85CA6NKD9 419 aa6.88□□□□□ -1.31
SPTA1-207ENST00000485680 UBOX5O94941 541 aa6.88□□□□□ -1.31
SPTA1-207ENST00000485680 CDK5R2Q13319 367 aa6.88□□□□□ -1.31
SPTA1-207ENST00000485680 SIAH1Q8IUQ4 282 aa6.88□□□□□ -1.31
SPTA1-207ENST00000485680 FAM53CQ9NYF3 392 aa6.88□□□□□ -1.31
SPTA1-207ENST00000485680 PCDHB10Q9UN67 800 aa6.88□□□□□ -1.31
SPTA1-207ENST00000485680 B8ZZF3 427 aa6.87□□□□□ -1.31
SPTA1-207ENST00000485680 RGS13O14921 159 aa6.87□□□□□ -1.31
SPTA1-207ENST00000485680 U2SURPO15042 1029 aaKnown RBP6.87□□□□□ -1.31
SPTA1-207ENST00000485680 LRIG2O94898 1065 aa6.87□□□□□ -1.31
SPTA1-207ENST00000485680 FAM87AP0C7U9 286 aa6.87□□□□□ -1.31
SPTA1-207ENST00000485680 MLANAQ16655 118 aa6.87□□□□□ -1.31
SPTA1-207ENST00000485680 DDR2Q16832 855 aa6.87□□□□□ -1.31
SPTA1-207ENST00000485680 INTS3Q68E01 1043 aaKnown RBP6.87□□□□□ -1.31
SPTA1-207ENST00000485680 TMEM192Q8IY95 271 aa6.87□□□□□ -1.31
SPTA1-207ENST00000485680 FLAD1Q8NFF5 587 aa6.87□□□□□ -1.31
SPTA1-207ENST00000485680 CYB5D2Q8WUJ1 264 aa6.87□□□□□ -1.31
SPTA1-207ENST00000485680 MIPEPQ99797 713 aa6.87□□□□□ -1.31
SPTA1-207ENST00000485680 ABCC8Q09428 1581 aa6.86□□□□□ -1.31
SPTA1-207ENST00000485680 TSPAN15O95858 294 aa6.86□□□□□ -1.31
SPTA1-207ENST00000485680 AOC3Q16853 763 aa6.86□□□□□ -1.31
SPTA1-207ENST00000485680 GIMAP6Q6P9H5 292 aa6.86□□□□□ -1.31
SPTA1-207ENST00000485680 C6orf15Q6UXA7 325 aaPredicted RBP6.86□□□□□ -1.31
SPTA1-207ENST00000485680 ZSWIM9Q86XI8 627 aa6.86□□□□□ -1.31
SPTA1-207ENST00000485680 LRRC56Q8IYG6 542 aaPredicted RBP6.86□□□□□ -1.31
SPTA1-207ENST00000485680 RIN3Q8TB24 985 aa6.86□□□□□ -1.31
SPTA1-207ENST00000485680 ZSCAN18Q8TBC5 510 aaPredicted RBP6.86□□□□□ -1.31
SPTA1-207ENST00000485680 PPP1R13LQ8WUF5 828 aa6.86□□□□□ -1.31
SPTA1-207ENST00000485680 CCDC74BQ96LY2 380 aa6.86□□□□□ -1.31
SPTA1-207ENST00000485680 SLC6A18Q96N87 628 aa6.86□□□□□ -1.31
SPTA1-207ENST00000485680 FAM86C1Q9NVL1 165 aa6.86□□□□□ -1.31
SPTA1-207ENST00000485680 SIRPGQ9P1W8 387 aa6.86□□□□□ -1.31
SPTA1-207ENST00000485680 CDK11AQ9UQ88 783 aaPredicted RBP6.86□□□□□ -1.31
SPTA1-207ENST00000485680 MAPK8IP1Q9UQF2 711 aa6.86□□□□□ -1.31
SPTA1-207ENST00000485680 TNIKQ9UKE5 1360 aa6.85□□□□□ -1.31
SPTA1-207ENST00000485680 FAM221BA6H8Z2 402 aa6.85□□□□□ -1.31
SPTA1-207ENST00000485680 DDAH1O94760 285 aa6.85□□□□□ -1.31
SPTA1-207ENST00000485680 SLITRK5O94991 958 aa6.85□□□□□ -1.31
SPTA1-207ENST00000485680 GJB6O95452 261 aa6.85□□□□□ -1.31
SPTA1-207ENST00000485680 GBP1P32455 592 aa6.85□□□□□ -1.31
SPTA1-207ENST00000485680 BUD31P41223 144 aaPredicted RBP6.85□□□□□ -1.31
SPTA1-207ENST00000485680 FXNQ16595 210 aa6.85□□□□□ -1.31
SPTA1-207ENST00000485680 TDRD10Q5VZ19 366 aaKnown RBP6.85□□□□□ -1.31
SPTA1-207ENST00000485680 LETMD1Q6P1Q0 360 aa6.85□□□□□ -1.31
SPTA1-207ENST00000485680 SLC23A3Q6PIS1 610 aa6.85□□□□□ -1.31
SPTA1-207ENST00000485680 TTLL10Q6ZVT0 673 aa6.85□□□□□ -1.31
SPTA1-207ENST00000485680 PPFIBP1Q86W92 1011 aa6.85□□□□□ -1.31
SPTA1-207ENST00000485680 TOP6BLQ8N6T0 577 aa6.85□□□□□ -1.31
SPTA1-207ENST00000485680 DNAJB8Q8NHS0 232 aa6.85□□□□□ -1.31
SPTA1-207ENST00000485680 SRPK1Q96SB4 655 aaKnown RBP6.85□□□□□ -1.31
SPTA1-207ENST00000485680 SNTG2Q9NY99 539 aa6.85□□□□□ -1.31
SPTA1-207ENST00000485680 PLAGL2Q9UPG8 496 aa6.85□□□□□ -1.31
SPTA1-207ENST00000485680 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.84□□□□□ -1.31
SPTA1-207ENST00000485680 LEFTY1O75610 366 aa6.84□□□□□ -1.31
SPTA1-207ENST00000485680 ZEB1P37275 1124 aaPredicted RBP6.84□□□□□ -1.31
SPTA1-207ENST00000485680 RASA3Q14644 834 aa6.84□□□□□ -1.31
SPTA1-207ENST00000485680 IFI16Q16666 785 aaKnown RBP6.84□□□□□ -1.31
SPTA1-207ENST00000485680 MRM1Q6IN84 353 aaKnown RBP6.84□□□□□ -1.31
SPTA1-207ENST00000485680 CDH24Q86UP0 819 aa6.84□□□□□ -1.31
SPTA1-207ENST00000485680 FAM178BQ8IXR5 827 aa6.84□□□□□ -1.31
SPTA1-207ENST00000485680 MFSD2AQ8NA29 543 aa6.84□□□□□ -1.31
SPTA1-207ENST00000485680 KLHL6Q8WZ60 621 aa6.84□□□□□ -1.31
SPTA1-207ENST00000485680 ZNF512BQ96KM6 892 aaPredicted RBP6.84□□□□□ -1.31
SPTA1-207ENST00000485680 DEPDC7Q96QD5 511 aa6.84□□□□□ -1.31
SPTA1-207ENST00000485680 MKNK2Q9HBH9 465 aa6.84□□□□□ -1.31
SPTA1-207ENST00000485680 PRDM10Q9NQV6 1147 aa6.84□□□□□ -1.31
SPTA1-207ENST00000485680 ZNF214Q9UL59 606 aaPredicted RBP6.84□□□□□ -1.31
SPTA1-207ENST00000485680 MSRB2Q9Y3D2 182 aa6.84□□□□□ -1.31
SPTA1-207ENST00000485680 SLC12A7Q9Y666 1083 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms