RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 BVESQ8NE79 360 aa7.49□□□□□ -1.21
SRRM1-213ENST00000485441 GPATCH3Q96I76 525 aa7.49□□□□□ -1.21
SRRM1-213ENST00000485441 EXOC2Q96KP1 924 aa7.49□□□□□ -1.21
SRRM1-213ENST00000485441 SLC26A8Q96RN1 970 aa7.49□□□□□ -1.21
SRRM1-213ENST00000485441 PRDM14Q9GZV8 571 aa7.49□□□□□ -1.21
SRRM1-213ENST00000485441 KCNF1Q9H3M0 494 aa7.49□□□□□ -1.21
SRRM1-213ENST00000485441 PRR13Q9NZ81 148 aa7.49□□□□□ -1.21
SRRM1-213ENST00000485441 EMC9Q9Y3B6 208 aa7.49□□□□□ -1.21
SRRM1-213ENST00000485441 CCDC163A0A0D9SF12 145 aa7.48□□□□□ -1.21
SRRM1-213ENST00000485441 HMX2A2RU54 273 aa7.48□□□□□ -1.21
SRRM1-213ENST00000485441 PPM1BO75688 479 aa7.48□□□□□ -1.21
SRRM1-213ENST00000485441 FAM87AP0C7U9 286 aa7.48□□□□□ -1.21
SRRM1-213ENST00000485441 GRIA2P42262 883 aa7.48□□□□□ -1.21
SRRM1-213ENST00000485441 YOD1Q5VVQ6 348 aaPredicted RBP7.48□□□□□ -1.21
SRRM1-213ENST00000485441 COX4I2Q96KJ9 171 aa7.48□□□□□ -1.21
SRRM1-213ENST00000485441 FEZ1Q99689 392 aa7.48□□□□□ -1.21
SRRM1-213ENST00000485441 IGF2BP3O00425 579 aaKnown RBP eCLIP7.47□□□□□ -1.21
SRRM1-213ENST00000485441 TBX1O43435 398 aa7.47□□□□□ -1.21
SRRM1-213ENST00000485441 ASMTLO95671 621 aa7.47□□□□□ -1.21
SRRM1-213ENST00000485441 ITGB2P05107 769 aa7.47□□□□□ -1.21
SRRM1-213ENST00000485441 CYP7A1P22680 504 aa7.47□□□□□ -1.21
SRRM1-213ENST00000485441 L1CAMP32004 1257 aa7.47□□□□□ -1.21
SRRM1-213ENST00000485441 HSP90AA2PQ14568 343 aaPredicted RBP7.47□□□□□ -1.21
SRRM1-213ENST00000485441 TCEA2Q15560 299 aa7.47□□□□□ -1.21
SRRM1-213ENST00000485441 DALRD3Q5D0E6 543 aaKnown RBP7.47□□□□□ -1.21
SRRM1-213ENST00000485441 FAM209AQ5JX71 171 aa7.47□□□□□ -1.21
SRRM1-213ENST00000485441 ADAT2Q7Z6V5 191 aaKnown RBP7.47□□□□□ -1.21
SRRM1-213ENST00000485441 ZAR1Q86SH2 424 aa7.47□□□□□ -1.21
SRRM1-213ENST00000485441 SYTL5Q8TDW5 730 aaPredicted RBP7.47□□□□□ -1.21
SRRM1-213ENST00000485441 OSBP2Q969R2 916 aa7.47□□□□□ -1.21
SRRM1-213ENST00000485441 DHRS4Q9BTZ2 278 aa7.47□□□□□ -1.21
SRRM1-213ENST00000485441 GBP3Q9H0R5 595 aa7.47□□□□□ -1.21
SRRM1-213ENST00000485441 C7orf69Q9H7B7 122 aa7.47□□□□□ -1.21
SRRM1-213ENST00000485441 DIS3Q9Y2L1 958 aaKnown RBP7.47□□□□□ -1.21
SRRM1-213ENST00000485441 RAXQ9Y2V3 346 aa7.47□□□□□ -1.21
SRRM1-213ENST00000485441 PCDHB12Q9Y5F1 795 aa7.47□□□□□ -1.21
SRRM1-213ENST00000485441 FHOD1Q9Y613 1164 aa7.47□□□□□ -1.21
SRRM1-213ENST00000485441 TRAV20A0A0B4J274 112 aa7.46□□□□□ -1.22
SRRM1-213ENST00000485441 AGRPO00253 132 aa7.46□□□□□ -1.22
SRRM1-213ENST00000485441 ZNF865P0CJ78 1059 aaPredicted RBP7.46□□□□□ -1.22
SRRM1-213ENST00000485441 FGFR1P11362 822 aa7.46□□□□□ -1.22
SRRM1-213ENST00000485441 ITGA4P13612 1032 aa7.46□□□□□ -1.22
SRRM1-213ENST00000485441 SFRP5Q5T4F7 317 aa7.46□□□□□ -1.22
SRRM1-213ENST00000485441 TRIM59Q8IWR1 403 aa7.46□□□□□ -1.22
SRRM1-213ENST00000485441 SCUBE1Q8IWY4 988 aa7.46□□□□□ -1.22
SRRM1-213ENST00000485441 DTWD2Q8NBA8 298 aa7.46□□□□□ -1.22
SRRM1-213ENST00000485441 GIMAP7Q8NHV1 300 aa7.46□□□□□ -1.22
SRRM1-213ENST00000485441 BRF1Q92994 677 aa7.46□□□□□ -1.22
SRRM1-213ENST00000485441 AARSD1Q9BTE6 412 aaKnown RBP7.46□□□□□ -1.22
SRRM1-213ENST00000485441 IFT57Q9NWB7 429 aa7.46□□□□□ -1.22
SRRM1-213ENST00000485441 TPX2Q9ULW0 747 aaKnown RBP7.46□□□□□ -1.22
SRRM1-213ENST00000485441 PRKAB1Q9Y478 270 aa7.46□□□□□ -1.22
SRRM1-213ENST00000485441 PRR33A8MZF0 331 aa7.45□□□□□ -1.22
SRRM1-213ENST00000485441 SRFP11831 508 aa7.45□□□□□ -1.22
SRRM1-213ENST00000485441 HSP90B1P14625 803 aaKnown RBP7.45□□□□□ -1.22
SRRM1-213ENST00000485441 GATA4P43694 442 aa7.45□□□□□ -1.22
SRRM1-213ENST00000485441 MASP1P48740 699 aa7.45□□□□□ -1.22
SRRM1-213ENST00000485441 CYP4F3Q08477 520 aa7.45□□□□□ -1.22
SRRM1-213ENST00000485441 TMC3Q7Z5M5 1100 aa7.45□□□□□ -1.22
SRRM1-213ENST00000485441 ADCY4Q8NFM4 1077 aa7.45□□□□□ -1.22
SRRM1-213ENST00000485441 BRINP2Q9C0B6 783 aa7.45□□□□□ -1.22
SRRM1-213ENST00000485441 PRDM5Q9NQX1 630 aaPredicted RBP7.45□□□□□ -1.22
SRRM1-213ENST00000485441 LRP2BPQ9P2M1 347 aa7.45□□□□□ -1.22
SRRM1-213ENST00000485441 STOML1Q9UBI4 398 aa7.45□□□□□ -1.22
SRRM1-213ENST00000485441 CGGBP1Q9UFW8 167 aaPredicted RBP7.45□□□□□ -1.22
SRRM1-213ENST00000485441 FBXL21Q9UKT6 434 aa7.45□□□□□ -1.22
SRRM1-213ENST00000485441 AKT3Q9Y243 479 aa7.45□□□□□ -1.22
SRRM1-213ENST00000485441 MRPS23Q9Y3D9 190 aaKnown RBP7.45□□□□□ -1.22
SRRM1-213ENST00000485441 CD2APQ9Y5K6 639 aa7.45□□□□□ -1.22
SRRM1-213ENST00000485441 TRBV23-1A0A0A0MS06 115 aa7.44□□□□□ -1.22
SRRM1-213ENST00000485441 RFPL3O75679 317 aa7.44□□□□□ -1.22
SRRM1-213ENST00000485441 KIR3DL1P43629 444 aa7.44□□□□□ -1.22
SRRM1-213ENST00000485441 CBX2Q14781 532 aaPredicted RBP7.44□□□□□ -1.22
SRRM1-213ENST00000485441 PRR23CQ6ZRP0 262 aa7.44□□□□□ -1.22
SRRM1-213ENST00000485441 TBC1D32Q96NH3 1257 aa7.44□□□□□ -1.22
SRRM1-213ENST00000485441 SUGT1Q9Y2Z0 365 aa7.44□□□□□ -1.22
SRRM1-213ENST00000485441 CAPN6Q9Y6Q1 641 aa7.44□□□□□ -1.22
SRRM1-213ENST00000485441 SHISA3A0PJX4 238 aa7.43□□□□□ -1.22
SRRM1-213ENST00000485441 FAM181BA6NEQ2 426 aa7.43□□□□□ -1.22
SRRM1-213ENST00000485441 FAM170BA6NMN3 283 aa7.43□□□□□ -1.22
SRRM1-213ENST00000485441 NOP56O00567 594 aaKnown RBP7.43□□□□□ -1.22
SRRM1-213ENST00000485441 SIGLEC6O43699 453 aa7.43□□□□□ -1.22
SRRM1-213ENST00000485441 DLX3O60479 287 aa7.43□□□□□ -1.22
SRRM1-213ENST00000485441 F13BP05160 661 aa7.43□□□□□ -1.22
SRRM1-213ENST00000485441 PABPC1P11940 636 aaKnown RBP7.43□□□□□ -1.22
SRRM1-213ENST00000485441 TNK2Q07912 1038 aa7.43□□□□□ -1.22
SRRM1-213ENST00000485441 KCNMA1Q12791 1236 aa7.43□□□□□ -1.22
SRRM1-213ENST00000485441 PTPROQ16827 1216 aa7.43□□□□□ -1.22
SRRM1-213ENST00000485441 NOL9Q5SY16 702 aaKnown RBP7.43□□□□□ -1.22
SRRM1-213ENST00000485441 RNF43Q68DV7 783 aa7.43□□□□□ -1.22
SRRM1-213ENST00000485441 FIBCD1Q8N539 461 aa7.43□□□□□ -1.22
SRRM1-213ENST00000485441 TP53INP1Q96A56 240 aa7.43□□□□□ -1.22
SRRM1-213ENST00000485441 CLUHP3Q96NS8 147 aa7.43□□□□□ -1.22
SRRM1-213ENST00000485441 DUSP15Q9H1R2 295 aaPredicted RBP7.43□□□□□ -1.22
SRRM1-213ENST00000485441 TMX1Q9H3N1 280 aa7.43□□□□□ -1.22
SRRM1-213ENST00000485441 NCOA5Q9HCD5 579 aaKnown RBP7.43□□□□□ -1.22
SRRM1-213ENST00000485441 GFOD1Q9NXC2 390 aa7.43□□□□□ -1.22
SRRM1-213ENST00000485441 MINPP1Q9UNW1 487 aa7.43□□□□□ -1.22
SRRM1-213ENST00000485441 U3KQE9 123 aa7.43□□□□□ -1.22
SRRM1-213ENST00000485441 DNAJC25-GNG10A0A024R161 153 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms