RNA–Protein interactions for RNA: ENST00000485365.1

SFPQ-208, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 693 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-208	ENST00000485365	TSPYL5	Q86VY4	417 aa	Predicted RBP	7.36	□□□□□ -1.23
SFPQ-208	ENST00000485365	C12orf49	Q9H741	205 aa		7.36	□□□□□ -1.23
SFPQ-208	ENST00000485365	GPATCH2	Q9NW75	528 aa		7.36	□□□□□ -1.23
SFPQ-208	ENST00000485365	PCDHA11	Q9Y5I1	949 aa		7.36	□□□□□ -1.23
SFPQ-208	ENST00000485365	RAPGEF6	Q8TEU7	1601 aa		7.36	□□□□□ -1.23
SFPQ-208	ENST00000485365	EFCAB5	A4FU69	1503 aa		7.36	□□□□□ -1.23
SFPQ-208	ENST00000485365	NUP153	P49790	1475 aa	Known RBP	7.36	□□□□□ -1.23
SFPQ-208	ENST00000485365	PGR	P06401	933 aa		7.35	□□□□□ -1.23
SFPQ-208	ENST00000485365	SEPT6	Q14141	434 aa		7.35	□□□□□ -1.23
SFPQ-208	ENST00000485365	SLC6A19	Q695T7	634 aa		7.35	□□□□□ -1.23
SFPQ-208	ENST00000485365	DBX2	Q6ZNG2	339 aa		7.35	□□□□□ -1.23
SFPQ-208	ENST00000485365	DTWD2	Q8NBA8	298 aa		7.35	□□□□□ -1.23
SFPQ-208	ENST00000485365	FAM8A1	Q9UBU6	413 aa		7.35	□□□□□ -1.23
SFPQ-208	ENST00000485365	WWC3	Q9ULE0	1092 aa		7.35	□□□□□ -1.23
SFPQ-208	ENST00000485365	PCDHB5	Q9Y5E4	795 aa		7.35	□□□□□ -1.23
SFPQ-208	ENST00000485365	KIF13A	Q9H1H9	1805 aa		7.35	□□□□□ -1.23
SFPQ-208	ENST00000485365	CDK13	Q14004	1512 aa	Known RBP	7.34	□□□□□ -1.23
SFPQ-208	ENST00000485365	RFXAP	O00287	272 aa		7.34	□□□□□ -1.23
SFPQ-208	ENST00000485365	RAPGEF3	O95398	923 aa		7.34	□□□□□ -1.23
SFPQ-208	ENST00000485365	LTK	P29376	864 aa		7.34	□□□□□ -1.23
SFPQ-208	ENST00000485365	PDE6B	P35913	854 aa		7.34	□□□□□ -1.23
SFPQ-208	ENST00000485365	FMR1	Q06787	632 aa	Known RBP eCLIP	7.34	□□□□□ -1.23
SFPQ-208	ENST00000485365	ALG1L	Q6GMV1	187 aa		7.34	□□□□□ -1.23
SFPQ-208	ENST00000485365	KRTAP5-3	Q6L8H2	238 aa		7.34	□□□□□ -1.23
SFPQ-208	ENST00000485365	CXorf38	Q8TB03	319 aa		7.34	□□□□□ -1.23
SFPQ-208	ENST00000485365	PPP1R13L	Q8WUF5	828 aa		7.34	□□□□□ -1.23
SFPQ-208	ENST00000485365	DHX38	Q92620	1227 aa	Known RBP	7.34	□□□□□ -1.23
SFPQ-208	ENST00000485365	EBF1	Q9UH73	591 aa		7.34	□□□□□ -1.23
SFPQ-208	ENST00000485365	CEP131	Q9UPN4	1083 aa		7.34	□□□□□ -1.23
SFPQ-208	ENST00000485365	ARID4B	Q4LE39	1312 aa	Predicted RBP	7.33	□□□□□ -1.24
SFPQ-208	ENST00000485365	TEX14	Q8IWB6	1497 aa		7.33	□□□□□ -1.24
SFPQ-208	ENST00000485365	SKOR2	Q2VWA4	1001 aa	Predicted RBP	7.33	□□□□□ -1.24
SFPQ-208	ENST00000485365	MCAT	Q8IVS2	390 aa	Known RBP	7.33	□□□□□ -1.24
SFPQ-208	ENST00000485365	TMEM151B	Q8IW70	566 aa		7.33	□□□□□ -1.24
SFPQ-208	ENST00000485365	SHISA4	Q96DD7	197 aa		7.33	□□□□□ -1.24
SFPQ-208	ENST00000485365	XYLT2	Q9H1B5	865 aa		7.33	□□□□□ -1.24
SFPQ-208	ENST00000485365	GPR160	Q9UJ42	338 aa		7.33	□□□□□ -1.24
SFPQ-208	ENST00000485365	TTF2	Q9UNY4	1162 aa	Known RBP	7.33	□□□□□ -1.24
SFPQ-208	ENST00000485365	SPG7	Q9UQ90	795 aa		7.33	□□□□□ -1.24
SFPQ-208	ENST00000485365	KDM6B	O15054	1643 aa		7.32	□□□□□ -1.24
SFPQ-208	ENST00000485365	RPS26	P62854	115 aa	Known RBP	7.32	□□□□□ -1.24
SFPQ-208	ENST00000485365	SNX17	Q15036	470 aa		7.32	□□□□□ -1.24
SFPQ-208	ENST00000485365	ACSF2	Q96CM8	615 aa	Predicted RBP	7.32	□□□□□ -1.24
SFPQ-208	ENST00000485365	CEP162	Q5TB80	1403 aa		7.32	□□□□□ -1.24
SFPQ-208	ENST00000485365	GLI2	P10070	1586 aa		7.32	□□□□□ -1.24
SFPQ-208	ENST00000485365	PSPN	O60542	156 aa		7.31	□□□□□ -1.24
SFPQ-208	ENST00000485365	PI3	P19957	117 aa		7.31	□□□□□ -1.24
SFPQ-208	ENST00000485365	GALK1	P51570	392 aa		7.31	□□□□□ -1.24
SFPQ-208	ENST00000485365	CHRNE	Q04844	493 aa		7.31	□□□□□ -1.24
SFPQ-208	ENST00000485365	EFCAB2	Q5VUJ9	269 aa		7.31	□□□□□ -1.24
SFPQ-208	ENST00000485365	SPPL2C	Q8IUH8	684 aa		7.31	□□□□□ -1.24
SFPQ-208	ENST00000485365	PANK1	Q8TE04	598 aa		7.31	□□□□□ -1.24
SFPQ-208	ENST00000485365	OTOL1	A6NHN0	477 aa	Predicted RBP	7.3	□□□□□ -1.24
SFPQ-208	ENST00000485365	NFKB2	Q00653	900 aa		7.3	□□□□□ -1.24
SFPQ-208	ENST00000485365	TEK	Q02763	1124 aa		7.3	□□□□□ -1.24
SFPQ-208	ENST00000485365	PRRT2	Q7Z6L0	340 aa	Predicted RBP	7.3	□□□□□ -1.24
SFPQ-208	ENST00000485365	ANKS4B	Q8N8V4	417 aa		7.3	□□□□□ -1.24
SFPQ-208	ENST00000485365	KCNH3	Q9ULD8	1083 aa		7.3	□□□□□ -1.24
SFPQ-208	ENST00000485365	CASKIN1	Q8WXD9	1431 aa		7.29	□□□□□ -1.24
SFPQ-208	ENST00000485365	MLEC	Q14165	292 aa		7.29	□□□□□ -1.24
SFPQ-208	ENST00000485365	GGN	Q86UU5	652 aa		7.29	□□□□□ -1.24
SFPQ-208	ENST00000485365	CYB5D2	Q8WUJ1	264 aa		7.29	□□□□□ -1.24
SFPQ-208	ENST00000485365	DACT3	Q96B18	629 aa	Predicted RBP	7.29	□□□□□ -1.24
SFPQ-208	ENST00000485365	SYTL4	Q96C24	671 aa	Predicted RBP	7.29	□□□□□ -1.24
SFPQ-208	ENST00000485365	MBD1	Q9UIS9	605 aa	Predicted RBP	7.29	□□□□□ -1.24
SFPQ-208	ENST00000485365	ADAM30	Q9UKF2	790 aa		7.29	□□□□□ -1.24
SFPQ-208	ENST00000485365	GNE	Q9Y223	722 aa	Known RBP	7.29	□□□□□ -1.24
SFPQ-208	ENST00000485365	HECW1	Q76N89	1606 aa		7.29	□□□□□ -1.24
SFPQ-208	ENST00000485365	MTUS2	Q5JR59	1369 aa		7.29	□□□□□ -1.24
SFPQ-208	ENST00000485365	MAGI3	Q5TCQ9	1506 aa		7.28	□□□□□ -1.24
SFPQ-208	ENST00000485365	OR14I1	A6ND48	311 aa		7.28	□□□□□ -1.24
SFPQ-208	ENST00000485365	NOTO	A8MTQ0	251 aa		7.28	□□□□□ -1.24
SFPQ-208	ENST00000485365	LRRN2	O75325	713 aa		7.28	□□□□□ -1.24
SFPQ-208	ENST00000485365	SASH1	O94885	1247 aa		7.28	□□□□□ -1.24
SFPQ-208	ENST00000485365	EFEMP2	O95967	443 aa		7.28	□□□□□ -1.24
SFPQ-208	ENST00000485365	PDE4B	Q07343	736 aa		7.28	□□□□□ -1.24
SFPQ-208	ENST00000485365	DUSP4	Q13115	394 aa		7.28	□□□□□ -1.24
SFPQ-208	ENST00000485365	AGMO	Q6ZNB7	445 aa		7.28	□□□□□ -1.24
SFPQ-208	ENST00000485365	RETREG2	Q8NC44	543 aa		7.28	□□□□□ -1.24
SFPQ-208	ENST00000485365	LINC01599	Q8WXQ3	324 aa		7.28	□□□□□ -1.24
SFPQ-208	ENST00000485365	SIGLEC10	Q96LC7	697 aa		7.28	□□□□□ -1.24
SFPQ-208	ENST00000485365	ARID3A	Q99856	593 aa		7.28	□□□□□ -1.24
SFPQ-208	ENST00000485365	MAP3K4	Q9Y6R4	1608 aa		7.27	□□□□□ -1.25
SFPQ-208	ENST00000485365	LMNB1	P20700	586 aa		7.27	□□□□□ -1.25
SFPQ-208	ENST00000485365	ATP2B2	Q01814	1243 aa		7.27	□□□□□ -1.25
SFPQ-208	ENST00000485365	CCDC85B	Q15834	202 aa	Predicted RBP	7.27	□□□□□ -1.25
SFPQ-208	ENST00000485365	RNF141	Q8WVD5	230 aa		7.27	□□□□□ -1.25
SFPQ-208	ENST00000485365	G6PC3	Q9BUM1	346 aa		7.27	□□□□□ -1.25
SFPQ-208	ENST00000485365	CFDP1	Q9UEE9	299 aa	Predicted RBP	7.27	□□□□□ -1.25
SFPQ-208	ENST00000485365	IRAK3	Q9Y616	596 aa		7.27	□□□□□ -1.25
SFPQ-208	ENST00000485365	TRO	Q12816	1431 aa	Predicted RBP	7.27	□□□□□ -1.25
SFPQ-208	ENST00000485365	AKNA	Q7Z591	1439 aa		7.27	□□□□□ -1.25
SFPQ-208	ENST00000485365	FANCA	O15360	1455 aa		7.26	□□□□□ -1.25
SFPQ-208	ENST00000485365	SHISA3	A0PJX4	238 aa		7.26	□□□□□ -1.25
SFPQ-208	ENST00000485365	HNRNPM	P52272	730 aa	Known RBP eCLIP	7.26	□□□□□ -1.25	2e-7	■■□□□ 12.7
SFPQ-208	ENST00000485365	EPHB3	P54753	998 aa		7.26	□□□□□ -1.25
SFPQ-208	ENST00000485365	ADGRF1	Q5T601	910 aa		7.26	□□□□□ -1.25
SFPQ-208	ENST00000485365	NLRX1	Q86UT6	975 aa		7.26	□□□□□ -1.25
SFPQ-208	ENST00000485365	SIRT2	Q8IXJ6	389 aa		7.26	□□□□□ -1.25
SFPQ-208	ENST00000485365	AFAP1	Q8N556	730 aa		7.26	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms