RNA–Protein interactions for RNA: ENST00000484729.2

HLA-DQB1-208, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-208ENST00000484729 TNFRSF10AO00220 468 aa18.52■□□□□ 0.56
HLA-DQB1-208ENST00000484729 GOLIM4O00461 696 aa18.52■□□□□ 0.56
HLA-DQB1-208ENST00000484729 KIAA0355O15063 1070 aa18.52■□□□□ 0.56
HLA-DQB1-208ENST00000484729 TAL1P17542 331 aaPredicted RBP18.52■□□□□ 0.56
HLA-DQB1-208ENST00000484729 DSG3P32926 999 aa18.52■□□□□ 0.56
HLA-DQB1-208ENST00000484729 FPGSQ05932 587 aa18.52■□□□□ 0.56
HLA-DQB1-208ENST00000484729 GABPAQ06546 454 aa18.52■□□□□ 0.56
HLA-DQB1-208ENST00000484729 SLC9C2Q5TAH2 1124 aa18.52■□□□□ 0.56
HLA-DQB1-208ENST00000484729 CRNKL1Q9BZJ0 848 aaKnown RBP18.52■□□□□ 0.56
HLA-DQB1-208ENST00000484729 ZBTB40Q9NUA8 1239 aa18.52■□□□□ 0.56
HLA-DQB1-208ENST00000484729 A0A0G2JMZ2 1700 aa18.52■□□□□ 0.55
HLA-DQB1-208ENST00000484729 MUC3AQ02505 3323 aa18.51■□□□□ 0.55
HLA-DQB1-208ENST00000484729 SMCHD1A6NHR9 2005 aa18.51■□□□□ 0.55
HLA-DQB1-208ENST00000484729 A0A1W2PQ45 241 aaPredicted RBP18.51■□□□□ 0.55
HLA-DQB1-208ENST00000484729 A0A1W2PQY0 241 aa18.51■□□□□ 0.55
HLA-DQB1-208ENST00000484729 RARBP10826 455 aa18.51■□□□□ 0.55
HLA-DQB1-208ENST00000484729 CLEC10AQ8IUN9 316 aa18.51■□□□□ 0.55
HLA-DQB1-208ENST00000484729 ABRAQ8N0Z2 381 aa18.51■□□□□ 0.55
HLA-DQB1-208ENST00000484729 SPICE1Q8N0Z3 855 aa18.51■□□□□ 0.55
HLA-DQB1-208ENST00000484729 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.51■□□□□ 0.55
HLA-DQB1-208ENST00000484729 PPM1EQ8WY54 764 aa18.51■□□□□ 0.55
HLA-DQB1-208ENST00000484729 LENG1Q96BZ8 264 aaPredicted RBP18.51■□□□□ 0.55
HLA-DQB1-208ENST00000484729 TMEM39AQ9NV64 488 aa18.51■□□□□ 0.55
HLA-DQB1-208ENST00000484729 ZNF532Q9HCE3 1301 aa18.5■□□□□ 0.55
HLA-DQB1-208ENST00000484729 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.5■□□□□ 0.55
HLA-DQB1-208ENST00000484729 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.5■□□□□ 0.55
HLA-DQB1-208ENST00000484729 FLOT1O75955 427 aa18.5■□□□□ 0.55
HLA-DQB1-208ENST00000484729 PGK2P07205 417 aa18.5■□□□□ 0.55
HLA-DQB1-208ENST00000484729 FCER1AP12319 257 aa18.5■□□□□ 0.55
HLA-DQB1-208ENST00000484729 SIRT2Q8IXJ6 389 aa18.5■□□□□ 0.55
HLA-DQB1-208ENST00000484729 MB21D1Q8N884 522 aa18.5■□□□□ 0.55
HLA-DQB1-208ENST00000484729 SLC44A5Q8NCS7 719 aa18.5■□□□□ 0.55
HLA-DQB1-208ENST00000484729 ZNF576Q9H609 170 aa18.5■□□□□ 0.55
HLA-DQB1-208ENST00000484729 RAB11FIP3O75154 756 aa18.49■□□□□ 0.55
HLA-DQB1-208ENST00000484729 CYP2D6P10635 497 aa18.49■□□□□ 0.55
HLA-DQB1-208ENST00000484729 FAAP100Q0VG06 881 aa18.49■□□□□ 0.55
HLA-DQB1-208ENST00000484729 TMEM132BQ14DG7 1078 aa18.49■□□□□ 0.55
HLA-DQB1-208ENST00000484729 RNF180Q86T96 592 aa18.49■□□□□ 0.55
HLA-DQB1-208ENST00000484729 CHMP4BQ9H444 224 aaKnown RBP18.49■□□□□ 0.55
HLA-DQB1-208ENST00000484729 MCM9Q9NXL9 1143 aa18.49■□□□□ 0.55
HLA-DQB1-208ENST00000484729 RCAN3Q9UKA8 241 aa18.49■□□□□ 0.55
HLA-DQB1-208ENST00000484729 SIAH1Q8IUQ4 282 aa18.48■□□□□ 0.55
HLA-DQB1-208ENST00000484729 LCORLQ8N3X6 602 aa18.48■□□□□ 0.55
HLA-DQB1-208ENST00000484729 SDR42E1Q8WUS8 393 aa18.48■□□□□ 0.55
HLA-DQB1-208ENST00000484729 TIFAQ96CG3 184 aa18.48■□□□□ 0.55
HLA-DQB1-208ENST00000484729 MMP19Q99542 508 aa18.48■□□□□ 0.55
HLA-DQB1-208ENST00000484729 CHD9Q3L8U1 2897 aa18.48■□□□□ 0.55
HLA-DQB1-208ENST00000484729 ZNFX1Q9P2E3 1918 aaKnown RBP18.47■□□□□ 0.55
HLA-DQB1-208ENST00000484729 GRXCR1A8MXD5 290 aa18.47■□□□□ 0.55
HLA-DQB1-208ENST00000484729 PBX2P40425 430 aa18.47■□□□□ 0.55
HLA-DQB1-208ENST00000484729 DYNLL2Q96FJ2 89 aa18.47■□□□□ 0.55
HLA-DQB1-208ENST00000484729 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.47■□□□□ 0.55
HLA-DQB1-208ENST00000484729 TINF2Q9BSI4 451 aa18.47■□□□□ 0.55
HLA-DQB1-208ENST00000484729 BOLA2Q9H3K6 86 aa18.47■□□□□ 0.55
HLA-DQB1-208ENST00000484729 PAG1Q9NWQ8 432 aa18.47■□□□□ 0.55
HLA-DQB1-208ENST00000484729 NAV1Q8NEY1 1877 aa18.47■□□□□ 0.55
HLA-DQB1-208ENST00000484729 TCRBV5S4A2TA0A5A2 114 aa18.46■□□□□ 0.55
HLA-DQB1-208ENST00000484729 ZNF865P0CJ78 1059 aaPredicted RBP18.46■□□□□ 0.55
HLA-DQB1-208ENST00000484729 TMEM179Q6ZVK1 233 aa18.46■□□□□ 0.55
HLA-DQB1-208ENST00000484729 ARMT1Q9H993 441 aa18.46■□□□□ 0.55
HLA-DQB1-208ENST00000484729 DCP1AQ9NPI6 582 aaPredicted RBP18.46■□□□□ 0.55
HLA-DQB1-208ENST00000484729 NRBP1Q9UHY1 535 aa18.46■□□□□ 0.55
HLA-DQB1-208ENST00000484729 BDP1A6H8Y1 2624 aa18.46■□□□□ 0.55
HLA-DQB1-208ENST00000484729 DCDC2CA8MYV0 355 aa18.45■□□□□ 0.54
HLA-DQB1-208ENST00000484729 ADAMTS4O75173 837 aa18.45■□□□□ 0.54
HLA-DQB1-208ENST00000484729 MBD4O95243 580 aa18.45■□□□□ 0.54
HLA-DQB1-208ENST00000484729 SLC25A27O95847 323 aa18.45■□□□□ 0.54
HLA-DQB1-208ENST00000484729 AKR1B1P15121 316 aa18.45■□□□□ 0.54
HLA-DQB1-208ENST00000484729 ACLYP53396 1101 aa18.45■□□□□ 0.54
HLA-DQB1-208ENST00000484729 ZNF792Q3KQV3 632 aa18.45■□□□□ 0.54
HLA-DQB1-208ENST00000484729 C16orf59Q7L2K0 433 aa18.45■□□□□ 0.54
HLA-DQB1-208ENST00000484729 ANKRD33Q7Z3H0 272 aa18.45■□□□□ 0.54
HLA-DQB1-208ENST00000484729 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.45■□□□□ 0.54
HLA-DQB1-208ENST00000484729 PRDM12Q9H4Q4 367 aa18.45■□□□□ 0.54
HLA-DQB1-208ENST00000484729 VCPKMTQ9H867 229 aa18.45■□□□□ 0.54
HLA-DQB1-208ENST00000484729 ARHGEF10LQ9HCE6 1279 aa18.45■□□□□ 0.54
HLA-DQB1-208ENST00000484729 STARD7Q9NQZ5 370 aa18.45■□□□□ 0.54
HLA-DQB1-208ENST00000484729 FBXO28Q9NVF7 368 aa18.45■□□□□ 0.54
HLA-DQB1-208ENST00000484729 TMX2Q9Y320 296 aa18.45■□□□□ 0.54
HLA-DQB1-208ENST00000484729 TIMP1P01033 207 aa18.44■□□□□ 0.54
HLA-DQB1-208ENST00000484729 AKR1A1P14550 325 aa18.44■□□□□ 0.54
HLA-DQB1-208ENST00000484729 ATP5JP18859 108 aa18.44■□□□□ 0.54
HLA-DQB1-208ENST00000484729 IRX5P78411 483 aaPredicted RBP18.44■□□□□ 0.54
HLA-DQB1-208ENST00000484729 ICA1Q05084 483 aa18.44■□□□□ 0.54
HLA-DQB1-208ENST00000484729 KCTD2Q14681 263 aa18.44■□□□□ 0.54
HLA-DQB1-208ENST00000484729 SLFNL1Q499Z3 407 aa18.44■□□□□ 0.54
HLA-DQB1-208ENST00000484729 CCDC129Q6ZRS4 1044 aa18.44■□□□□ 0.54
HLA-DQB1-208ENST00000484729 TOX2Q96NM4 488 aa18.44■□□□□ 0.54
HLA-DQB1-208ENST00000484729 GAS2L1Q99501 681 aaPredicted RBP18.44■□□□□ 0.54
HLA-DQB1-208ENST00000484729 PBX4Q9BYU1 374 aa18.44■□□□□ 0.54
HLA-DQB1-208ENST00000484729 SMIM22K7EJ46 135 aa18.43■□□□□ 0.54
HLA-DQB1-208ENST00000484729 ADD2P35612 726 aa18.43■□□□□ 0.54
HLA-DQB1-208ENST00000484729 CCDC85BQ15834 202 aaPredicted RBP18.43■□□□□ 0.54
HLA-DQB1-208ENST00000484729 KCNA10Q16322 511 aa18.43■□□□□ 0.54
HLA-DQB1-208ENST00000484729 C20orf194Q5TEA3 1177 aa18.43■□□□□ 0.54
HLA-DQB1-208ENST00000484729 RIOX2Q8IUF8 465 aa18.43■□□□□ 0.54
HLA-DQB1-208ENST00000484729 TSEN34Q9BSV6 310 aaKnown RBP18.43■□□□□ 0.54
HLA-DQB1-208ENST00000484729 TBX21Q9UL17 535 aa18.43■□□□□ 0.54
HLA-DQB1-208ENST00000484729 COL11A1P12107 1806 aaPredicted RBP18.43■□□□□ 0.54
HLA-DQB1-208ENST00000484729 SYNRGQ9UMZ2 1314 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms