RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 SALL3Q9BXA9 1300 aa33.89■■■■□ 3.02
HLA-C-207ENST00000484378 LHX8Q68G74 356 aa33.89■■■■□ 3.02
HLA-C-207ENST00000484378 IFNL3Q8IZI9 196 aa33.89■■■■□ 3.02
HLA-C-207ENST00000484378 CYP2C19P33261 490 aa33.88■■■■□ 3.01
HLA-C-207ENST00000484378 ZMYM1Q5SVZ6 1142 aa33.88■■■■□ 3.01
HLA-C-207ENST00000484378 FAM83BQ5T0W9 1011 aa33.88■■■■□ 3.01
HLA-C-207ENST00000484378 RBM27Q9P2N5 1060 aaKnown RBP33.88■■■■□ 3.01
HLA-C-207ENST00000484378 TMEM132BQ14DG7 1078 aa33.87■■■■□ 3.01
HLA-C-207ENST00000484378 C7orf61Q8IZ16 206 aa33.87■■■■□ 3.01
HLA-C-207ENST00000484378 NYAP2Q9P242 653 aa33.87■■■■□ 3.01
HLA-C-207ENST00000484378 COL11A1P12107 1806 aaPredicted RBP33.87■■■■□ 3.01
HLA-C-207ENST00000484378 FRMPD3Q5JV73 1810 aa33.87■■■■□ 3.01
HLA-C-207ENST00000484378 PRDM1O75626 825 aa33.86■■■■□ 3.01
HLA-C-207ENST00000484378 CNGA1P29973 690 aa33.86■■■■□ 3.01
HLA-C-207ENST00000484378 HDAC1Q13547 482 aaPredicted RBP33.86■■■■□ 3.01
HLA-C-207ENST00000484378 ZNF444Q8N0Y2 327 aaPredicted RBP33.86■■■■□ 3.01
HLA-C-207ENST00000484378 NAPBQ9H115 298 aa33.86■■■■□ 3.01
HLA-C-207ENST00000484378 SLC5A4Q9NY91 659 aa33.86■■■■□ 3.01
HLA-C-207ENST00000484378 PPP1R9AQ9ULJ8 1098 aa33.86■■■■□ 3.01
HLA-C-207ENST00000484378 SLC25A27O95847 323 aa33.85■■■■□ 3.01
HLA-C-207ENST00000484378 OLFML2BQ68BL8 750 aa33.85■■■■□ 3.01
HLA-C-207ENST00000484378 ABRAQ8N0Z2 381 aa33.85■■■■□ 3.01
HLA-C-207ENST00000484378 PCDH10Q9P2E7 1040 aa33.85■■■■□ 3.01
HLA-C-207ENST00000484378 ADAMTS5Q9UNA0 930 aa33.85■■■■□ 3.01
HLA-C-207ENST00000484378 PFASO15067 1338 aa33.84■■■■□ 3.01
HLA-C-207ENST00000484378 NUP88Q99567 741 aaPredicted RBP33.84■■■■□ 3.01
HLA-C-207ENST00000484378 DDX20Q9UHI6 824 aaKnown RBP33.84■■■■□ 3.01
HLA-C-207ENST00000484378 VWA5AO00534 786 aa33.83■■■■□ 3.01
HLA-C-207ENST00000484378 MSCO60682 206 aa33.83■■■■□ 3.01
HLA-C-207ENST00000484378 FCER1AP12319 257 aa33.83■■■■□ 3.01
HLA-C-207ENST00000484378 CLIP2Q9UDT6 1046 aa33.83■■■■□ 3.01
HLA-C-207ENST00000484378 IGKV6D-41A0A0C4DH26 115 aa33.82■■■■□ 3
HLA-C-207ENST00000484378 F5H6K3 240 aa33.82■■■■□ 3
HLA-C-207ENST00000484378 COBLO75128 1261 aa33.82■■■■□ 3
HLA-C-207ENST00000484378 NDUFB10O96000 172 aa33.82■■■■□ 3
HLA-C-207ENST00000484378 SLC3A2P08195 630 aaKnown RBP33.82■■■■□ 3
HLA-C-207ENST00000484378 PDE4BQ07343 736 aa33.82■■■■□ 3
HLA-C-207ENST00000484378 KLRC3Q07444 240 aa33.82■■■■□ 3
HLA-C-207ENST00000484378 PRO3102Q9H379 93 aa33.82■■■■□ 3
HLA-C-207ENST00000484378 MYH4Q9Y623 1939 aa33.82■■■■□ 3
HLA-C-207ENST00000484378 IGHA2P01877 340 aa33.81■■■■□ 3
HLA-C-207ENST00000484378 CYBAP13498 195 aa33.81■■■■□ 3
HLA-C-207ENST00000484378 RIOX2Q8IUF8 465 aa33.81■■■■□ 3
HLA-C-207ENST00000484378 CEP95Q96GE4 821 aa33.81■■■■□ 3
HLA-C-207ENST00000484378 SLF1Q9BQI6 1058 aa33.81■■■■□ 3
HLA-C-207ENST00000484378 STAP2Q9UGK3 403 aa33.81■■■■□ 3
HLA-C-207ENST00000484378 COL6A1P12109 1028 aa33.8■■■■□ 3
HLA-C-207ENST00000484378 STAT3P40763 770 aa33.8■■■■□ 3
HLA-C-207ENST00000484378 PPARAQ07869 468 aa33.8■■■■□ 3
HLA-C-207ENST00000484378 TRPV1Q8NER1 839 aa33.8■■■■□ 3
HLA-C-207ENST00000484378 EVI5LQ96CN4 794 aa33.8■■■■□ 3
HLA-C-207ENST00000484378 MMP19Q99542 508 aa33.8■■■■□ 3
HLA-C-207ENST00000484378 ZNF214Q9UL59 606 aaPredicted RBP33.8■■■■□ 3
HLA-C-207ENST00000484378 TSPY3P0CV98 308 aa33.79■■■■□ 3
HLA-C-207ENST00000484378 TSPY8P0CW00 308 aa33.79■■■■□ 3
HLA-C-207ENST00000484378 PDE1AP54750 535 aa33.79■■■■□ 3
HLA-C-207ENST00000484378 CCDC129Q6ZRS4 1044 aa33.79■■■■□ 3
HLA-C-207ENST00000484378 MTMR4Q9NYA4 1195 aa33.79■■■■□ 3
HLA-C-207ENST00000484378 ZMYND8Q9ULU4 1186 aaPredicted RBP33.79■■■■□ 3
HLA-C-207ENST00000484378 PLIN4Q96Q06 1357 aa33.79■■■■□ 3
HLA-C-207ENST00000484378 COPB2P35606 906 aa33.78■■■■□ 3
HLA-C-207ENST00000484378 AAMPQ13685 434 aa33.78■■■■□ 3
HLA-C-207ENST00000484378 REPS2Q8NFH8 660 aa33.78■■■■□ 3
HLA-C-207ENST00000484378 TTLL1O95922 423 aa33.77■■■■□ 3
HLA-C-207ENST00000484378 KCTD2Q14681 263 aa33.77■■■■□ 3
HLA-C-207ENST00000484378 MAML3Q96JK9 1138 aa33.77■■■■□ 3
HLA-C-207ENST00000484378 FAM47AQ5JRC9 791 aa33.76■■■□□ 2.99
HLA-C-207ENST00000484378 LRRC47Q8N1G4 583 aaKnown RBP33.76■■■□□ 2.99
HLA-C-207ENST00000484378 NEDD1Q8NHV4 660 aa33.76■■■□□ 2.99
HLA-C-207ENST00000484378 SYNPO2Q9UMS6 1093 aa33.76■■■□□ 2.99
HLA-C-207ENST00000484378 DNAH12Q6ZR08 3092 aa33.75■■■□□ 2.99
HLA-C-207ENST00000484378 PRPF38AQ8NAV1 312 aaKnown RBP33.75■■■□□ 2.99
HLA-C-207ENST00000484378 MKL1Q969V6 931 aa33.75■■■□□ 2.99
HLA-C-207ENST00000484378 TEX13BQ9BXU2 312 aa33.75■■■□□ 2.99
HLA-C-207ENST00000484378 FOXP2O15409 715 aa33.74■■■□□ 2.99
HLA-C-207ENST00000484378 TFAP4Q01664 338 aa33.74■■■□□ 2.99
HLA-C-207ENST00000484378 LNPKQ9C0E8 428 aa33.74■■■□□ 2.99
HLA-C-207ENST00000484378 ZNFX1Q9P2E3 1918 aaKnown RBP33.74■■■□□ 2.99
HLA-C-207ENST00000484378 PGK2P07205 417 aa33.73■■■□□ 2.99
HLA-C-207ENST00000484378 SYN1P17600 705 aa33.73■■■□□ 2.99
HLA-C-207ENST00000484378 LRRC26Q2I0M4 334 aa33.73■■■□□ 2.99
HLA-C-207ENST00000484378 SNRNP48Q6IEG0 339 aaKnown RBP33.73■■■□□ 2.99
HLA-C-207ENST00000484378 GMCL1P1Q8NEA9 526 aa33.73■■■□□ 2.99
HLA-C-207ENST00000484378 CTDP1Q9Y5B0 961 aaPredicted RBP33.73■■■□□ 2.99
HLA-C-207ENST00000484378 A0A1W2PPC1 479 aa33.72■■■□□ 2.99
HLA-C-207ENST00000484378 DNM1LO00429 736 aa33.72■■■□□ 2.99
HLA-C-207ENST00000484378 SEPT4O43236 478 aa33.72■■■□□ 2.99
HLA-C-207ENST00000484378 ANO1Q5XXA6 986 aa33.72■■■□□ 2.99
HLA-C-207ENST00000484378 KIFC2Q96AC6 838 aa33.72■■■□□ 2.99
HLA-C-207ENST00000484378 SENP6Q9GZR1 1112 aaPredicted RBP33.72■■■□□ 2.99
HLA-C-207ENST00000484378 SZT2Q5T011 3432 aa33.71■■■□□ 2.99
HLA-C-207ENST00000484378 PRAMEF19Q5SWL8 479 aa33.71■■■□□ 2.99
HLA-C-207ENST00000484378 VPS53Q5VIR6 699 aa33.71■■■□□ 2.99
HLA-C-207ENST00000484378 RWDD1Q9H446 243 aaPredicted RBP33.71■■■□□ 2.99
HLA-C-207ENST00000484378 HELLSQ9NRZ9 838 aa33.71■■■□□ 2.99
HLA-C-207ENST00000484378 FEM1BQ9UK73 627 aa33.71■■■□□ 2.99
HLA-C-207ENST00000484378 ISY1Q9ULR0 285 aaKnown RBP33.71■■■□□ 2.99
HLA-C-207ENST00000484378 PLXNA1Q9UIW2 1896 aa33.71■■■□□ 2.99
HLA-C-207ENST00000484378 ZBED4O75132 1171 aa33.7■■■□□ 2.99
HLA-C-207ENST00000484378 CTDSPL2Q05D32 466 aa33.7■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms