RNA–Protein interactions for RNA: ENST00000484178.5

SSBP1-211, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSBP1, Length 676 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-211ENST00000484178 DHX38Q92620 1227 aaKnown RBP6.44□□□□□ -1.38
SSBP1-211ENST00000484178 RNF32Q9H0A6 362 aa6.44□□□□□ -1.38
SSBP1-211ENST00000484178 SLC6A17Q9H1V8 727 aa6.44□□□□□ -1.38
SSBP1-211ENST00000484178 KCNK12Q9HB15 430 aa6.44□□□□□ -1.38
SSBP1-211ENST00000484178 CWC22Q9HCG8 908 aaKnown RBP6.44□□□□□ -1.38
SSBP1-211ENST00000484178 DUSP13Q9UII6 198 aa6.44□□□□□ -1.38
SSBP1-211ENST00000484178 KIF21AQ7Z4S6 1674 aa6.43□□□□□ -1.38
SSBP1-211ENST00000484178 B8ZZF3 427 aa6.43□□□□□ -1.38
SSBP1-211ENST00000484178 SEMA7AO75326 666 aa6.43□□□□□ -1.38
SSBP1-211ENST00000484178 ST13P50502 369 aaKnown RBP6.43□□□□□ -1.38
SSBP1-211ENST00000484178 EGR3Q06889 387 aa6.43□□□□□ -1.38
SSBP1-211ENST00000484178 SLFN12Q8IYM2 578 aa6.43□□□□□ -1.38
SSBP1-211ENST00000484178 GIPC2Q8TF65 315 aa6.43□□□□□ -1.38
SSBP1-211ENST00000484178 RNF141Q8WVD5 230 aa6.43□□□□□ -1.38
SSBP1-211ENST00000484178 ZNF281Q9Y2X9 895 aa6.43□□□□□ -1.38
SSBP1-211ENST00000484178 PRR36Q9H6K5 1346 aa6.43□□□□□ -1.38
SSBP1-211ENST00000484178 EHBP1L1Q8N3D4 1523 aa6.42□□□□□ -1.38
SSBP1-211ENST00000484178 RBAK-RBAKDNI3L0D1 243 aa6.42□□□□□ -1.38
SSBP1-211ENST00000484178 VAMP1P23763 118 aa6.42□□□□□ -1.38
SSBP1-211ENST00000484178 C8orf37Q96NL8 207 aa6.42□□□□□ -1.38
SSBP1-211ENST00000484178 KRTAP4-5Q9BYR2 181 aa6.42□□□□□ -1.38
SSBP1-211ENST00000484178 YBX2Q9Y2T7 364 aaKnown RBP6.42□□□□□ -1.38
SSBP1-211ENST00000484178 FANCIQ9NVI1 1328 aa6.42□□□□□ -1.38
SSBP1-211ENST00000484178 MIA2Q96PC5 1412 aa6.42□□□□□ -1.38
SSBP1-211ENST00000484178 PCF11O94913 1555 aaKnown RBP6.41□□□□□ -1.38
SSBP1-211ENST00000484178 ANKRD33BA6NCL7 494 aa6.41□□□□□ -1.38
SSBP1-211ENST00000484178 INHBBP09529 407 aa6.41□□□□□ -1.38
SSBP1-211ENST00000484178 CDK11BP21127 795 aaKnown RBP6.41□□□□□ -1.38
SSBP1-211ENST00000484178 TRHRP34981 398 aaPredicted RBP6.41□□□□□ -1.38
SSBP1-211ENST00000484178 YARSP54577 528 aaKnown RBP6.41□□□□□ -1.38
SSBP1-211ENST00000484178 CHRNEQ04844 493 aa6.41□□□□□ -1.38
SSBP1-211ENST00000484178 FAM50AQ14320 339 aaKnown RBP6.41□□□□□ -1.38
SSBP1-211ENST00000484178 SPPL2CQ8IUH8 684 aa6.41□□□□□ -1.38
SSBP1-211ENST00000484178 BAHD1Q8TBE0 780 aaPredicted RBP6.41□□□□□ -1.38
SSBP1-211ENST00000484178 KRTAP9-3Q9BYQ3 159 aa6.41□□□□□ -1.38
SSBP1-211ENST00000484178 MCOLN1Q9GZU1 580 aa6.41□□□□□ -1.38
SSBP1-211ENST00000484178 ZNF552Q9H707 407 aaPredicted RBP6.41□□□□□ -1.38
SSBP1-211ENST00000484178 CDK11AQ9UQ88 783 aaPredicted RBP6.41□□□□□ -1.38
SSBP1-211ENST00000484178 MTUS2Q5JR59 1369 aa6.41□□□□□ -1.38
SSBP1-211ENST00000484178 MYOM3Q5VTT5 1437 aa6.41□□□□□ -1.38
SSBP1-211ENST00000484178 FANCD2Q9BXW9 1451 aa6.41□□□□□ -1.38
SSBP1-211ENST00000484178 WDR97A6NE52 1622 aa6.4□□□□□ -1.38
SSBP1-211ENST00000484178 NUAK1O60285 661 aa6.4□□□□□ -1.38
SSBP1-211ENST00000484178 CILPO75339 1184 aa6.4□□□□□ -1.38
SSBP1-211ENST00000484178 DLG4P78352 724 aa6.4□□□□□ -1.38
SSBP1-211ENST00000484178 FAM177A1Q8N128 213 aaPredicted RBP6.4□□□□□ -1.38
SSBP1-211ENST00000484178 PHC3Q8NDX5 983 aa6.4□□□□□ -1.38
SSBP1-211ENST00000484178 C19orf44Q9H6X5 657 aa6.4□□□□□ -1.38
SSBP1-211ENST00000484178 PCDHA11Q9Y5I1 949 aa6.4□□□□□ -1.38
SSBP1-211ENST00000484178 ARID4BQ4LE39 1312 aaPredicted RBP6.4□□□□□ -1.39
SSBP1-211ENST00000484178 TCOF1Q13428 1488 aaKnown RBP6.4□□□□□ -1.39
SSBP1-211ENST00000484178 TEX51A0A1B0GUA7 166 aa6.39□□□□□ -1.39
SSBP1-211ENST00000484178 MYOCOSA0A1B0GUC4 107 aa6.39□□□□□ -1.39
SSBP1-211ENST00000484178 FAM221AA4D161 298 aa6.39□□□□□ -1.39
SSBP1-211ENST00000484178 PLCG1P19174 1290 aa6.39□□□□□ -1.39
SSBP1-211ENST00000484178 DUSP4Q13115 394 aa6.39□□□□□ -1.39
SSBP1-211ENST00000484178 DDX10Q13206 875 aaKnown RBP6.39□□□□□ -1.39
SSBP1-211ENST00000484178 TAF1CQ15572 869 aaPredicted RBP6.39□□□□□ -1.39
SSBP1-211ENST00000484178 TIGD5Q53EQ6 642 aa6.39□□□□□ -1.39
SSBP1-211ENST00000484178 ZNF326Q5BKZ1 582 aaKnown RBP6.39□□□□□ -1.39
SSBP1-211ENST00000484178 MEI1Q5TIA1 1274 aa6.39□□□□□ -1.39
SSBP1-211ENST00000484178 ANKS4BQ8N8V4 417 aa6.39□□□□□ -1.39
SSBP1-211ENST00000484178 FAM13CQ8NE31 585 aa6.39□□□□□ -1.39
SSBP1-211ENST00000484178 LINC01599Q8WXQ3 324 aa6.39□□□□□ -1.39
SSBP1-211ENST00000484178 INTS4Q96HW7 963 aaKnown RBP6.39□□□□□ -1.39
SSBP1-211ENST00000484178 DUSP9Q99956 384 aaKnown RBP6.39□□□□□ -1.39
SSBP1-211ENST00000484178 ASPNQ9BXN1 380 aa6.39□□□□□ -1.39
SSBP1-211ENST00000484178 ROCK1Q13464 1354 aa6.39□□□□□ -1.39
SSBP1-211ENST00000484178 SNAPC4Q5SXM2 1469 aa6.39□□□□□ -1.39
SSBP1-211ENST00000484178 SAMD9Q5K651 1589 aa6.39□□□□□ -1.39
SSBP1-211ENST00000484178 UPK3BL1B0FP48 263 aa6.38□□□□□ -1.39
SSBP1-211ENST00000484178 UPK3BL2E5RIL1 263 aa6.38□□□□□ -1.39
SSBP1-211ENST00000484178 LTKP29376 864 aa6.38□□□□□ -1.39
SSBP1-211ENST00000484178 CTSWP56202 376 aa6.38□□□□□ -1.39
SSBP1-211ENST00000484178 TEKQ02763 1124 aa6.38□□□□□ -1.39
SSBP1-211ENST00000484178 MAP3K11Q16584 847 aa6.38□□□□□ -1.39
SSBP1-211ENST00000484178 FBXO33Q7Z6M2 555 aa6.38□□□□□ -1.39
SSBP1-211ENST00000484178 SYTL4Q96C24 671 aaPredicted RBP6.38□□□□□ -1.39
SSBP1-211ENST00000484178 SHISA4Q96DD7 197 aa6.38□□□□□ -1.39
SSBP1-211ENST00000484178 TLR6Q9Y2C9 796 aa6.38□□□□□ -1.39
SSBP1-211ENST00000484178 CORINQ9Y5Q5 1042 aa6.38□□□□□ -1.39
SSBP1-211ENST00000484178 USP31Q70CQ4 1352 aa6.38□□□□□ -1.39
SSBP1-211ENST00000484178 ARHGEF11O15085 1522 aa6.38□□□□□ -1.39
SSBP1-211ENST00000484178 PTPN23Q9H3S7 1636 aa6.38□□□□□ -1.39
SSBP1-211ENST00000484178 CTTNBP2Q8WZ74 1663 aa6.38□□□□□ -1.39
SSBP1-211ENST00000484178 SUPT6HQ7KZ85 1726 aaKnown RBP6.38□□□□□ -1.39
SSBP1-211ENST00000484178 ADAMTS20P59510 1910 aa6.38□□□□□ -1.39
SSBP1-211ENST00000484178 LAMC3Q9Y6N6 1575 aa6.37□□□□□ -1.39
SSBP1-211ENST00000484178 TOPBP1Q92547 1522 aa6.37□□□□□ -1.39
SSBP1-211ENST00000484178 GRIN2BQ13224 1484 aa6.37□□□□□ -1.39
SSBP1-211ENST00000484178 NCOA2Q15596 1464 aa6.37□□□□□ -1.39
SSBP1-211ENST00000484178 NAIPQ13075 1403 aa6.37□□□□□ -1.39
SSBP1-211ENST00000484178 HRKO00198 91 aa6.37□□□□□ -1.39
SSBP1-211ENST00000484178 ITGAEP38570 1179 aa6.37□□□□□ -1.39
SSBP1-211ENST00000484178 LMNB2Q03252 620 aa6.37□□□□□ -1.39
SSBP1-211ENST00000484178 ENOX1Q8TC92 643 aaKnown RBP6.37□□□□□ -1.39
SSBP1-211ENST00000484178 SREK1Q8WXA9 508 aaKnown RBP6.37□□□□□ -1.39
SSBP1-211ENST00000484178 GATAD2BQ8WXI9 593 aa6.37□□□□□ -1.39
SSBP1-211ENST00000484178 JARID2Q92833 1246 aaPredicted RBP6.37□□□□□ -1.39
SSBP1-211ENST00000484178 VWCEQ96DN2 955 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms