RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 SLC26A8Q96RN1 970 aa10.94□□□□□ -0.66
MCF2-207ENST00000483690 NOP56O00567 594 aaKnown RBP10.93□□□□□ -0.66
MCF2-207ENST00000483690 LRRN2O75325 713 aa10.93□□□□□ -0.66
MCF2-207ENST00000483690 CBX7O95931 251 aa10.93□□□□□ -0.66
MCF2-207ENST00000483690 ITGAVP06756 1048 aa10.93□□□□□ -0.66
MCF2-207ENST00000483690 ADMP35318 185 aa10.93□□□□□ -0.66
MCF2-207ENST00000483690 KIR3DL1P43629 444 aa10.93□□□□□ -0.66
MCF2-207ENST00000483690 HSP90AA2PQ14568 343 aaPredicted RBP10.93□□□□□ -0.66
MCF2-207ENST00000483690 TMEM67Q5HYA8 995 aa10.93□□□□□ -0.66
MCF2-207ENST00000483690 C16orf86Q6ZW13 317 aa10.93□□□□□ -0.66
MCF2-207ENST00000483690 ZNF227Q86WZ6 799 aa10.93□□□□□ -0.66
MCF2-207ENST00000483690 BVESQ8NE79 360 aa10.93□□□□□ -0.66
MCF2-207ENST00000483690 PUS7Q96PZ0 661 aaKnown RBP10.93□□□□□ -0.66
MCF2-207ENST00000483690 SLKQ9H2G2 1235 aaPredicted RBP10.93□□□□□ -0.66
MCF2-207ENST00000483690 CNTNAP4Q9C0A0 1308 aa10.92□□□□□ -0.66
MCF2-207ENST00000483690 ZNF445P59923 1031 aa10.92□□□□□ -0.66
MCF2-207ENST00000483690 PRR23CQ6ZRP0 262 aa10.92□□□□□ -0.66
MCF2-207ENST00000483690 CRACR2BQ8N4Y2 399 aaPredicted RBP10.92□□□□□ -0.66
MCF2-207ENST00000483690 ZNF513Q8N8E2 541 aaPredicted RBP10.92□□□□□ -0.66
MCF2-207ENST00000483690 ADCY4Q8NFM4 1077 aa10.92□□□□□ -0.66
MCF2-207ENST00000483690 RCC1LQ96I51 464 aaKnown RBP10.92□□□□□ -0.66
MCF2-207ENST00000483690 PRDM14Q9GZV8 571 aa10.92□□□□□ -0.66
MCF2-207ENST00000483690 PRR13Q9NZ81 148 aa10.92□□□□□ -0.66
MCF2-207ENST00000483690 AKT3Q9Y243 479 aa10.92□□□□□ -0.66
MCF2-207ENST00000483690 A0A087WZG4 1122 aa10.91□□□□□ -0.66
MCF2-207ENST00000483690 CYP27A1Q02318 531 aa10.91□□□□□ -0.66
MCF2-207ENST00000483690 POMZP3Q6PJE2 187 aa10.91□□□□□ -0.66
MCF2-207ENST00000483690 FBXL6Q8N531 539 aa10.91□□□□□ -0.66
MCF2-207ENST00000483690 DTWD2Q8NBA8 298 aa10.91□□□□□ -0.66
MCF2-207ENST00000483690 MFSD14AQ96MC6 490 aa10.91□□□□□ -0.66
MCF2-207ENST00000483690 CDC6Q99741 560 aa10.91□□□□□ -0.66
MCF2-207ENST00000483690 AARSD1Q9BTE6 412 aaKnown RBP10.91□□□□□ -0.66
MCF2-207ENST00000483690 ASCC2Q9H1I8 757 aaPredicted RBP10.91□□□□□ -0.66
MCF2-207ENST00000483690 ARHGEF4Q9NR80 690 aa10.91□□□□□ -0.66
MCF2-207ENST00000483690 FHOD1Q9Y613 1164 aa10.91□□□□□ -0.66
MCF2-207ENST00000483690 TRAV20A0A0B4J274 112 aa10.9□□□□□ -0.66
MCF2-207ENST00000483690 IGF2BP3O00425 579 aaKnown RBP eCLIP10.9□□□□□ -0.66
MCF2-207ENST00000483690 PPP2R2AP63151 447 aa10.9□□□□□ -0.66
MCF2-207ENST00000483690 SNW1Q13573 536 aaKnown RBP10.9□□□□□ -0.66
MCF2-207ENST00000483690 TCEA2Q15560 299 aa10.9□□□□□ -0.66
MCF2-207ENST00000483690 TAF7LQ5H9L4 462 aa10.9□□□□□ -0.66
MCF2-207ENST00000483690 FAM214BQ7L5A3 538 aa10.9□□□□□ -0.66
MCF2-207ENST00000483690 SYNPOQ8N3V7 929 aa10.9□□□□□ -0.66
MCF2-207ENST00000483690 SYTL5Q8TDW5 730 aaPredicted RBP10.9□□□□□ -0.66
MCF2-207ENST00000483690 BRF1Q92994 677 aa10.9□□□□□ -0.66
MCF2-207ENST00000483690 IPO9Q96P70 1041 aaKnown RBP10.9□□□□□ -0.66
MCF2-207ENST00000483690 GFOD1Q9NXC2 390 aa10.9□□□□□ -0.66
MCF2-207ENST00000483690 FAM170BA6NMN3 283 aa10.89□□□□□ -0.67
MCF2-207ENST00000483690 GNAT3A8MTJ3 354 aa10.89□□□□□ -0.67
MCF2-207ENST00000483690 DUSP27Q5VZP5 1158 aa10.89□□□□□ -0.67
MCF2-207ENST00000483690 RNF43Q68DV7 783 aa10.89□□□□□ -0.67
MCF2-207ENST00000483690 C22orf34Q6ZV56 151 aa10.89□□□□□ -0.67
MCF2-207ENST00000483690 ZNF765Q7L2R6 523 aa10.89□□□□□ -0.67
MCF2-207ENST00000483690 KIAA0907Q7Z7F0 614 aaPredicted RBP10.89□□□□□ -0.67
MCF2-207ENST00000483690 ARHGEF39Q8N4T4 335 aa10.89□□□□□ -0.67
MCF2-207ENST00000483690 Q96M66 194 aa10.89□□□□□ -0.67
MCF2-207ENST00000483690 HEXIM2Q96MH2 286 aaKnown RBP10.89□□□□□ -0.67
MCF2-207ENST00000483690 FEZ1Q99689 392 aa10.89□□□□□ -0.67
MCF2-207ENST00000483690 DSCC1Q9BVC3 393 aa10.89□□□□□ -0.67
MCF2-207ENST00000483690 LGR4Q9BXB1 951 aa10.89□□□□□ -0.67
MCF2-207ENST00000483690 NOL6Q9H6R4 1146 aaKnown RBP10.89□□□□□ -0.67
MCF2-207ENST00000483690 CGGBP1Q9UFW8 167 aaPredicted RBP10.89□□□□□ -0.67
MCF2-207ENST00000483690 DIS3Q9Y2L1 958 aaKnown RBP10.89□□□□□ -0.67
MCF2-207ENST00000483690 EMC9Q9Y3B6 208 aa10.89□□□□□ -0.67
MCF2-207ENST00000483690 CCDC163A0A0D9SF12 145 aa10.88□□□□□ -0.67
MCF2-207ENST00000483690 ASMTLO95671 621 aa10.88□□□□□ -0.67
MCF2-207ENST00000483690 RASSF7Q02833 373 aa10.88□□□□□ -0.67
MCF2-207ENST00000483690 KCNMA1Q12791 1236 aa10.88□□□□□ -0.67
MCF2-207ENST00000483690 RNF187Q5TA31 235 aaPredicted RBP10.88□□□□□ -0.67
MCF2-207ENST00000483690 GPAT2Q6NUI2 795 aa10.88□□□□□ -0.67
MCF2-207ENST00000483690 MFSD4AQ8N468 514 aa10.88□□□□□ -0.67
MCF2-207ENST00000483690 FIBCD1Q8N539 461 aa10.88□□□□□ -0.67
MCF2-207ENST00000483690 SIGLEC6O43699 453 aa10.87□□□□□ -0.67
MCF2-207ENST00000483690 ZNF865P0CJ78 1059 aaPredicted RBP10.87□□□□□ -0.67
MCF2-207ENST00000483690 NMIQ13287 307 aaPredicted RBP10.87□□□□□ -0.67
MCF2-207ENST00000483690 PPP2R5DQ14738 602 aa10.87□□□□□ -0.67
MCF2-207ENST00000483690 TMC3Q7Z5M5 1100 aa10.87□□□□□ -0.67
MCF2-207ENST00000483690 TRIM59Q8IWR1 403 aa10.87□□□□□ -0.67
MCF2-207ENST00000483690 SHISA5Q8N114 240 aa10.87□□□□□ -0.67
MCF2-207ENST00000483690 PIWIL2Q8TC59 973 aaKnown RBP10.87□□□□□ -0.67
MCF2-207ENST00000483690 MRGPRX3Q96LB0 322 aa10.87□□□□□ -0.67
MCF2-207ENST00000483690 TPSG1Q9NRR2 321 aa10.87□□□□□ -0.67
MCF2-207ENST00000483690 SF3B6Q9Y3B4 125 aaKnown RBP10.87□□□□□ -0.67
MCF2-207ENST00000483690 PRR33A8MZF0 331 aa10.86□□□□□ -0.67
MCF2-207ENST00000483690 NFIAQ12857 509 aa10.86□□□□□ -0.67
MCF2-207ENST00000483690 FOXB2Q5VYV0 432 aa10.86□□□□□ -0.67
MCF2-207ENST00000483690 ARHGAP27Q6ZUM4 889 aa10.86□□□□□ -0.67
MCF2-207ENST00000483690 DBNDD2Q9BQY9 259 aa10.86□□□□□ -0.67
MCF2-207ENST00000483690 CHST7Q9NS84 486 aa10.86□□□□□ -0.67
MCF2-207ENST00000483690 CAPN6Q9Y6Q1 641 aa10.86□□□□□ -0.67
MCF2-207ENST00000483690 TRBV23-1A0A0A0MS06 115 aa10.85□□□□□ -0.67
MCF2-207ENST00000483690 FAM155AB1AL88 458 aaPredicted RBP10.85□□□□□ -0.67
MCF2-207ENST00000483690 RBAK-RBAKDNI3L0D1 243 aa10.85□□□□□ -0.67
MCF2-207ENST00000483690 TBX1O43435 398 aa10.85□□□□□ -0.67
MCF2-207ENST00000483690 KCNH1O95259 989 aa10.85□□□□□ -0.67
MCF2-207ENST00000483690 PRAMEF1O95521 474 aa10.85□□□□□ -0.67
MCF2-207ENST00000483690 F13BP05160 661 aa10.85□□□□□ -0.67
MCF2-207ENST00000483690 FGFR1P11362 822 aa10.85□□□□□ -0.67
MCF2-207ENST00000483690 L1CAMP32004 1257 aa10.85□□□□□ -0.67
MCF2-207ENST00000483690 TNK2Q07912 1038 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms