RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 TAF1DQ9H5J8 278 aaPredicted RBP18.74■□□□□ 0.59
RFTN1-209ENST00000483671 GJB4Q9NTQ9 266 aa18.74■□□□□ 0.59
RFTN1-209ENST00000483671 hCG_1984214I3L0E3 225 aa18.73■□□□□ 0.59
RFTN1-209ENST00000483671 NDUFB10O96000 172 aa18.73■□□□□ 0.59
RFTN1-209ENST00000483671 KRT85P78386 507 aa18.73■□□□□ 0.59
RFTN1-209ENST00000483671 DNM1Q05193 864 aaKnown RBP18.73■□□□□ 0.59
RFTN1-209ENST00000483671 SAFBQ15424 915 aaKnown RBP eCLIP18.73■□□□□ 0.59
RFTN1-209ENST00000483671 SULF1Q8IWU6 871 aa18.73■□□□□ 0.59
RFTN1-209ENST00000483671 ZNF713Q8N859 430 aaPredicted RBP18.73■□□□□ 0.59
RFTN1-209ENST00000483671 SHISA4Q96DD7 197 aa18.73■□□□□ 0.59
RFTN1-209ENST00000483671 MTMR8Q96EF0 704 aa18.73■□□□□ 0.59
RFTN1-209ENST00000483671 FOXP1Q9H334 677 aaPredicted RBP18.73■□□□□ 0.59
RFTN1-209ENST00000483671 POTECB2RU33 542 aa18.72■□□□□ 0.59
RFTN1-209ENST00000483671 SLC1A4P43007 532 aa18.72■□□□□ 0.59
RFTN1-209ENST00000483671 CSPP1Q1MSJ5 1256 aa18.72■□□□□ 0.59
RFTN1-209ENST00000483671 NOL9Q5SY16 702 aaKnown RBP18.72■□□□□ 0.59
RFTN1-209ENST00000483671 USP48Q86UV5 1035 aa18.72■□□□□ 0.59
RFTN1-209ENST00000483671 PNMA8AQ86V59 439 aaPredicted RBP18.72■□□□□ 0.59
RFTN1-209ENST00000483671 SCYL3Q8IZE3 742 aa18.72■□□□□ 0.59
RFTN1-209ENST00000483671 RRP36Q96EU6 259 aaKnown RBP18.72■□□□□ 0.59
RFTN1-209ENST00000483671 CHAMP1Q96JM3 812 aa18.72■□□□□ 0.59
RFTN1-209ENST00000483671 GOPCQ9HD26 462 aa18.72■□□□□ 0.59
RFTN1-209ENST00000483671 LMBRD1Q9NUN5 540 aa18.72■□□□□ 0.59
RFTN1-209ENST00000483671 MTMR7Q9Y216 660 aa18.72■□□□□ 0.59
RFTN1-209ENST00000483671 ATAD5Q96QE3 1844 aa18.72■□□□□ 0.59
RFTN1-209ENST00000483671 FRMPD2Q68DX3 1309 aaPredicted RBP18.71■□□□□ 0.59
RFTN1-209ENST00000483671 DOCK1Q14185 1865 aa18.71■□□□□ 0.59
RFTN1-209ENST00000483671 CCDC96Q2M329 555 aa18.71■□□□□ 0.59
RFTN1-209ENST00000483671 BTNL9Q6UXG8 535 aa18.71■□□□□ 0.59
RFTN1-209ENST00000483671 ACER1Q8TDN7 264 aa18.71■□□□□ 0.59
RFTN1-209ENST00000483671 KLRG1Q96E93 195 aa18.71■□□□□ 0.59
RFTN1-209ENST00000483671 SCAND2PQ9GZW5 306 aaPredicted RBP18.71■□□□□ 0.59
RFTN1-209ENST00000483671 VCPKMTQ9H867 229 aa18.71■□□□□ 0.59
RFTN1-209ENST00000483671 BARHL2Q9NY43 387 aa18.71■□□□□ 0.59
RFTN1-209ENST00000483671 VPS54Q9P1Q0 977 aa18.71■□□□□ 0.59
RFTN1-209ENST00000483671 CNPY2Q9Y2B0 182 aa18.71■□□□□ 0.59
RFTN1-209ENST00000483671 ELP1O95163 1332 aa18.7■□□□□ 0.58
RFTN1-209ENST00000483671 hCG_1642624A0A1W2PR95 340 aa18.7■□□□□ 0.58
RFTN1-209ENST00000483671 KIF28PB7ZC32 967 aa18.7■□□□□ 0.58
RFTN1-209ENST00000483671 CALML3P27482 149 aa18.7■□□□□ 0.58
RFTN1-209ENST00000483671 ECE1P42892 770 aa18.7■□□□□ 0.58
RFTN1-209ENST00000483671 NPY5RQ15761 445 aa18.7■□□□□ 0.58
RFTN1-209ENST00000483671 GALNT17Q6IS24 598 aa18.7■□□□□ 0.58
RFTN1-209ENST00000483671 DIS3L2Q8IYB7 885 aaKnown RBP18.7■□□□□ 0.58
RFTN1-209ENST00000483671 CCDC148Q8NFR7 591 aa18.7■□□□□ 0.58
RFTN1-209ENST00000483671 ZNF396Q96N95 335 aaPredicted RBP18.7■□□□□ 0.58
RFTN1-209ENST00000483671 WDR18Q9BV38 432 aa18.7■□□□□ 0.58
RFTN1-209ENST00000483671 SEC63Q9UGP8 760 aaKnown RBP18.7■□□□□ 0.58
RFTN1-209ENST00000483671 CFAP45Q9UL16 551 aa18.7■□□□□ 0.58
RFTN1-209ENST00000483671 MYH15Q9Y2K3 1946 aa18.69■□□□□ 0.58
RFTN1-209ENST00000483671 POLR2AP24928 1970 aaKnown RBP18.69■□□□□ 0.58
RFTN1-209ENST00000483671 BAZ2BQ9UIF8 2168 aaKnown RBP18.69■□□□□ 0.58
RFTN1-209ENST00000483671 STXBP3O00186 592 aa18.69■□□□□ 0.58
RFTN1-209ENST00000483671 PLA2G6O60733 806 aa18.69■□□□□ 0.58
RFTN1-209ENST00000483671 BMP3P12645 472 aa18.69■□□□□ 0.58
RFTN1-209ENST00000483671 INPP5BP32019 993 aa18.69■□□□□ 0.58
RFTN1-209ENST00000483671 NBR1Q14596 966 aa18.69■□□□□ 0.58
RFTN1-209ENST00000483671 SKOR2Q2VWA4 1001 aaPredicted RBP18.69■□□□□ 0.58
RFTN1-209ENST00000483671 MYSM1Q5VVJ2 828 aa18.69■□□□□ 0.58
RFTN1-209ENST00000483671 FAM173BQ6P4H8 233 aa18.69■□□□□ 0.58
RFTN1-209ENST00000483671 KRT26Q7Z3Y9 468 aa18.69■□□□□ 0.58
RFTN1-209ENST00000483671 NOSTRINQ8IVI9 506 aa18.69■□□□□ 0.58
RFTN1-209ENST00000483671 DAGLBQ8NCG7 672 aa18.69■□□□□ 0.58
RFTN1-209ENST00000483671 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.69■□□□□ 0.58
RFTN1-209ENST00000483671 WRNIP1Q96S55 665 aa18.69■□□□□ 0.58
RFTN1-209ENST00000483671 UBA5Q9GZZ9 404 aa18.69■□□□□ 0.58
RFTN1-209ENST00000483671 KIAA1683Q9H0B3 1180 aa18.69■□□□□ 0.58
RFTN1-209ENST00000483671 JMJD4Q9H9V9 463 aa18.69■□□□□ 0.58
RFTN1-209ENST00000483671 GPCPD1Q9NPB8 672 aa18.69■□□□□ 0.58
RFTN1-209ENST00000483671 KCNJ14Q9UNX9 436 aa18.69■□□□□ 0.58
RFTN1-209ENST00000483671 PNMA6FA0A0J9YX94 578 aa18.68■□□□□ 0.58
RFTN1-209ENST00000483671 ESYT2A0FGR8 921 aa18.68■□□□□ 0.58
RFTN1-209ENST00000483671 VEGFAP15692 232 aaPredicted RBP18.68■□□□□ 0.58
RFTN1-209ENST00000483671 FOXD4L6Q3SYB3 417 aaPredicted RBP18.68■□□□□ 0.58
RFTN1-209ENST00000483671 PRAMEF18Q5VWM3 479 aa18.68■□□□□ 0.58
RFTN1-209ENST00000483671 WWC2Q6AWC2 1192 aa18.68■□□□□ 0.58
RFTN1-209ENST00000483671 TTBK2Q6IQ55 1244 aa18.68■□□□□ 0.58
RFTN1-209ENST00000483671 FOXD4L3Q6VB84 417 aaPredicted RBP18.68■□□□□ 0.58
RFTN1-209ENST00000483671 KCTD1Q719H9 257 aa18.68■□□□□ 0.58
RFTN1-209ENST00000483671 ADGRF4Q8IZF3 695 aa18.68■□□□□ 0.58
RFTN1-209ENST00000483671 CCDC12Q8WUD4 166 aaPredicted RBP18.68■□□□□ 0.58
RFTN1-209ENST00000483671 LPAR1Q92633 364 aa18.68■□□□□ 0.58
RFTN1-209ENST00000483671 PIGSQ96S52 555 aa18.68■□□□□ 0.58
RFTN1-209ENST00000483671 CPVLQ9H3G5 476 aa18.68■□□□□ 0.58
RFTN1-209ENST00000483671 BRMS1Q9HCU9 246 aa18.68■□□□□ 0.58
RFTN1-209ENST00000483671 PAPPA2Q9BXP8 1791 aa18.68■□□□□ 0.58
RFTN1-209ENST00000483671 TCHHQ07283 1943 aa18.67■□□□□ 0.58
RFTN1-209ENST00000483671 BTBD18B2RXH4 712 aa18.67■□□□□ 0.58
RFTN1-209ENST00000483671 ADM5C9JUS6 153 aa18.67■□□□□ 0.58
RFTN1-209ENST00000483671 PRPF40AO75400 957 aaKnown RBP18.67■□□□□ 0.58
RFTN1-209ENST00000483671 KRT2P35908 639 aa18.67■□□□□ 0.58
RFTN1-209ENST00000483671 PPP1R18Q6NYC8 613 aa18.67■□□□□ 0.58
RFTN1-209ENST00000483671 TNFRSF25Q93038 417 aa18.67■□□□□ 0.58
RFTN1-209ENST00000483671 AS3MTQ9HBK9 375 aa18.67■□□□□ 0.58
RFTN1-209ENST00000483671 POLR3EQ9NVU0 708 aa18.67■□□□□ 0.58
RFTN1-209ENST00000483671 RTEL1Q9NZ71 1219 aa18.67■□□□□ 0.58
RFTN1-209ENST00000483671 ZBTB5O15062 677 aa18.66■□□□□ 0.58
RFTN1-209ENST00000483671 FIBPO43427 364 aa18.66■□□□□ 0.58
RFTN1-209ENST00000483671 USP2O75604 605 aaPredicted RBP18.66■□□□□ 0.58
RFTN1-209ENST00000483671 PTPRAP18433 802 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms