RNA–Protein interactions for RNA: ENST00000482928.5

TSPAN1-208, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 844 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-208ENST00000482928 CDC27P30260 824 aa14.46□□□□□ -0.09
TSPAN1-208ENST00000482928 ICA1Q05084 483 aa14.46□□□□□ -0.09
TSPAN1-208ENST00000482928 GNL2Q13823 731 aaKnown RBP14.46□□□□□ -0.09
TSPAN1-208ENST00000482928 RCSD1Q6JBY9 416 aa14.46□□□□□ -0.09
TSPAN1-208ENST00000482928 TATDN1Q6P1N9 297 aa14.46□□□□□ -0.09
TSPAN1-208ENST00000482928 METTL16Q86W50 562 aaKnown RBP14.46□□□□□ -0.09
TSPAN1-208ENST00000482928 TRPM4Q8TD43 1214 aa14.46□□□□□ -0.09
TSPAN1-208ENST00000482928 DCPSQ96C86 337 aaKnown RBP14.46□□□□□ -0.09
TSPAN1-208ENST00000482928 LRCH3Q96II8 777 aa14.46□□□□□ -0.09
TSPAN1-208ENST00000482928 MAP3K14Q99558 947 aa14.46□□□□□ -0.09
TSPAN1-208ENST00000482928 LZTS2Q9BRK4 669 aa14.46□□□□□ -0.09
TSPAN1-208ENST00000482928 DEFB129Q9H1M3 183 aa14.46□□□□□ -0.09
TSPAN1-208ENST00000482928 DNAJC18Q9H819 358 aa14.46□□□□□ -0.09
TSPAN1-208ENST00000482928 GGA3Q9NZ52 723 aa14.46□□□□□ -0.09
TSPAN1-208ENST00000482928 PPP2R3BQ9Y5P8 575 aa14.46□□□□□ -0.09
TSPAN1-208ENST00000482928 SPTBN5Q9NRC6 3674 aaKnown RBP14.45□□□□□ -0.1
TSPAN1-208ENST00000482928 SOX1O00570 391 aaPredicted RBP14.45□□□□□ -0.1
TSPAN1-208ENST00000482928 PTMSP20962 102 aa14.45□□□□□ -0.1
TSPAN1-208ENST00000482928 TROAPQ12815 778 aa14.45□□□□□ -0.1
TSPAN1-208ENST00000482928 PKP1Q13835 747 aa14.45□□□□□ -0.1
TSPAN1-208ENST00000482928 GRM4Q14833 912 aa14.45□□□□□ -0.1
TSPAN1-208ENST00000482928 USP50Q70EL3 339 aaPredicted RBP14.45□□□□□ -0.1
TSPAN1-208ENST00000482928 LRRC47Q8N1G4 583 aaKnown RBP14.45□□□□□ -0.1
TSPAN1-208ENST00000482928 CCDC82Q8N4S0 544 aa14.45□□□□□ -0.1
TSPAN1-208ENST00000482928 PHKBQ93100 1093 aa14.45□□□□□ -0.1
TSPAN1-208ENST00000482928 ALG1Q9BT22 464 aa14.45□□□□□ -0.1
TSPAN1-208ENST00000482928 ARHGEF10LQ9HCE6 1279 aa14.45□□□□□ -0.1
TSPAN1-208ENST00000482928 SIPA1L1O43166 1804 aa14.45□□□□□ -0.1
TSPAN1-208ENST00000482928 IGKV6D-41A0A0C4DH26 115 aa14.44□□□□□ -0.1
TSPAN1-208ENST00000482928 DDX11L8A8MPP1 907 aa14.44□□□□□ -0.1
TSPAN1-208ENST00000482928 DEXIO95424 95 aa14.44□□□□□ -0.1
TSPAN1-208ENST00000482928 F13A1P00488 732 aa14.44□□□□□ -0.1
TSPAN1-208ENST00000482928 GH2P01242 217 aa14.44□□□□□ -0.1
TSPAN1-208ENST00000482928 CCDC96Q2M329 555 aa14.44□□□□□ -0.1
TSPAN1-208ENST00000482928 MCTP1Q6DN14 999 aa14.44□□□□□ -0.1
TSPAN1-208ENST00000482928 RGMBQ6NW40 437 aa14.44□□□□□ -0.1
TSPAN1-208ENST00000482928 TMTC3Q6ZXV5 915 aa14.44□□□□□ -0.1
TSPAN1-208ENST00000482928 MIGA2Q7L4E1 593 aa14.44□□□□□ -0.1
TSPAN1-208ENST00000482928 SULF1Q8IWU6 871 aa14.44□□□□□ -0.1
TSPAN1-208ENST00000482928 RNF26Q9BY78 433 aaPredicted RBP14.44□□□□□ -0.1
TSPAN1-208ENST00000482928 GLIS2Q9BZE0 524 aaPredicted RBP14.44□□□□□ -0.1
TSPAN1-208ENST00000482928 SH2D4AQ9H788 454 aa14.44□□□□□ -0.1
TSPAN1-208ENST00000482928 ASTN2O75129 1339 aaPredicted RBP14.43□□□□□ -0.1
TSPAN1-208ENST00000482928 NBR1Q14596 966 aa14.43□□□□□ -0.1
TSPAN1-208ENST00000482928 SEPT2Q15019 361 aa14.43□□□□□ -0.1
TSPAN1-208ENST00000482928 SAFBQ15424 915 aaKnown RBP eCLIP14.43□□□□□ -0.1
TSPAN1-208ENST00000482928 SUPT20HL1Q3ZLR7 823 aa14.43□□□□□ -0.1
TSPAN1-208ENST00000482928 FAM217BQ9NTX9 383 aaPredicted RBP14.43□□□□□ -0.1
TSPAN1-208ENST00000482928 NYAP2Q9P242 653 aa14.43□□□□□ -0.1
TSPAN1-208ENST00000482928 SCAF8Q9UPN6 1271 aaKnown RBP14.43□□□□□ -0.1
TSPAN1-208ENST00000482928 MTMR6Q9Y217 621 aa14.43□□□□□ -0.1
TSPAN1-208ENST00000482928 PLEKHA8P1O95397 391 aa14.42□□□□□ -0.1
TSPAN1-208ENST00000482928 EEF2P13639 858 aaKnown RBP14.42□□□□□ -0.1
TSPAN1-208ENST00000482928 NCLP19338 710 aaKnown RBP14.42□□□□□ -0.1
TSPAN1-208ENST00000482928 NFKBIBQ15653 356 aa14.42□□□□□ -0.1
TSPAN1-208ENST00000482928 NTRK3Q16288 839 aa14.42□□□□□ -0.1
TSPAN1-208ENST00000482928 ASPRV1Q53RT3 343 aa14.42□□□□□ -0.1
TSPAN1-208ENST00000482928 CDC37L1Q7L3B6 337 aa14.42□□□□□ -0.1
TSPAN1-208ENST00000482928 USP48Q86UV5 1035 aa14.42□□□□□ -0.1
TSPAN1-208ENST00000482928 CLEC10AQ8IUN9 316 aa14.42□□□□□ -0.1
TSPAN1-208ENST00000482928 CMTR1Q8N1G2 835 aaKnown RBP14.42□□□□□ -0.1
TSPAN1-208ENST00000482928 CCDC102AQ96A19 550 aa14.42□□□□□ -0.1
TSPAN1-208ENST00000482928 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.42□□□□□ -0.1
TSPAN1-208ENST00000482928 ZNF341Q9BYN7 854 aa14.42□□□□□ -0.1
TSPAN1-208ENST00000482928 ZSCAN16Q9H4T2 348 aaPredicted RBP14.42□□□□□ -0.1
TSPAN1-208ENST00000482928 ZBTB21Q9ULJ3 1066 aa14.42□□□□□ -0.1
TSPAN1-208ENST00000482928 PRPF3O43395 683 aaKnown RBP14.41□□□□□ -0.1
TSPAN1-208ENST00000482928 ASNSP08243 561 aa14.41□□□□□ -0.1
TSPAN1-208ENST00000482928 SLURP2P0DP57 97 aa14.41□□□□□ -0.1
TSPAN1-208ENST00000482928 FDPSP14324 419 aaKnown RBP14.41□□□□□ -0.1
TSPAN1-208ENST00000482928 GUCY1B3Q02153 619 aa14.41□□□□□ -0.1
TSPAN1-208ENST00000482928 CSPP1Q1MSJ5 1256 aa14.41□□□□□ -0.1
TSPAN1-208ENST00000482928 FERMT3Q86UX7 667 aa14.41□□□□□ -0.1
TSPAN1-208ENST00000482928 DEFB123Q8N688 67 aa14.41□□□□□ -0.1
TSPAN1-208ENST00000482928 BRMS1Q9HCU9 246 aa14.41□□□□□ -0.1
TSPAN1-208ENST00000482928 GOPCQ9HD26 462 aa14.41□□□□□ -0.1
TSPAN1-208ENST00000482928 GINM1Q9NU53 330 aa14.41□□□□□ -0.1
TSPAN1-208ENST00000482928 SEC63Q9UGP8 760 aaKnown RBP14.41□□□□□ -0.1
TSPAN1-208ENST00000482928 ZDHHC9Q9Y397 364 aa14.41□□□□□ -0.1
TSPAN1-208ENST00000482928 V9GY48 417 aaPredicted RBP14.41□□□□□ -0.1
TSPAN1-208ENST00000482928 USP17L5A8MUK1 530 aa14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 KLRF2D3W0D1 207 aa14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 BAG4O95429 457 aaKnown RBP14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 GOLGA8HP0CJ92 632 aa14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 MCM4P33991 863 aa14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 NF2P35240 595 aa14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 CAP2P40123 477 aa14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 NOVP48745 357 aa14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 HIRAP54198 1017 aaPredicted RBP14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 FOXD4L6Q3SYB3 417 aaPredicted RBP14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 GPATCH4Q5T3I0 446 aaKnown RBP14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 NBPF12Q5TAG4 269 aaPredicted RBP14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 SLFN13Q68D06 897 aa14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 FOXD4L3Q6VB84 417 aaPredicted RBP14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 CDAN1Q8IWY9 1227 aa14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 RGS22Q8NE09 1264 aa14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 DCAF4Q8WV16 495 aa14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 PIBF1Q8WXW3 757 aa14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 RRP36Q96EU6 259 aaKnown RBP14.4□□□□□ -0.1
TSPAN1-208ENST00000482928 TEPSINQ96N21 525 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms