RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 ITGA6P23229 1130 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 CWF19L2Q2TBE0 894 aaKnown RBP9.14□□□□□ -0.95
TVP23B-203ENST00000482741 LRRFIP1Q32MZ4 808 aaKnown RBP9.14□□□□□ -0.95
TVP23B-203ENST00000482741 PROX2Q3B8N5 592 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 STRIP1Q5VSL9 837 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 C3orf67Q6ZVT6 689 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 C1orf131Q8NDD1 294 aaKnown RBP9.14□□□□□ -0.95
TVP23B-203ENST00000482741 LRRC27Q9C0I9 530 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 KBTBD4Q9NVX7 518 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 ZNF112Q9UJU3 913 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 SALL2Q9Y467 1007 aaPredicted RBP9.14□□□□□ -0.95
TVP23B-203ENST00000482741 GPR75-ASB3A0A0A6YYF3 556 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 DKK1O94907 266 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 IL31Q6EBC2 164 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 ZNF280DQ6N043 979 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 PARD3BQ8TEW8 1205 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 MAP4K1Q92918 833 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.14□□□□□ -0.95
TVP23B-203ENST00000482741 LSG1Q9H089 658 aaKnown RBP9.14□□□□□ -0.95
TVP23B-203ENST00000482741 ATP8A1Q9Y2Q0 1164 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.14□□□□□ -0.95
TVP23B-203ENST00000482741 SGSM2O43147 1006 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 ORC4O43929 436 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 IGHA2P01877 340 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 ADD2P35612 726 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 FBXW10Q5XX13 1052 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 CNBD1Q8NA66 436 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 SCG3Q8WXD2 468 aaKnown RBP9.14□□□□□ -0.95
TVP23B-203ENST00000482741 TBC1D32Q96NH3 1257 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 NAP1L4Q99733 375 aaKnown RBP9.14□□□□□ -0.95
TVP23B-203ENST00000482741 EPAS1Q99814 870 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 RIOK1Q9BRS2 568 aaKnown RBP9.14□□□□□ -0.95
TVP23B-203ENST00000482741 PAGR1Q9BTK6 254 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 GREM2Q9H772 168 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 METTL5Q9NRN9 209 aaKnown RBP9.14□□□□□ -0.95
TVP23B-203ENST00000482741 FKBPLQ9UIM3 349 aa9.14□□□□□ -0.95
TVP23B-203ENST00000482741 HSPA4P34932 840 aa9.13□□□□□ -0.95
TVP23B-203ENST00000482741 ZSCAN25Q6NSZ9 544 aa9.13□□□□□ -0.95
TVP23B-203ENST00000482741 EAF2Q96CJ1 260 aaPredicted RBP9.13□□□□□ -0.95
TVP23B-203ENST00000482741 HHIPL1Q96JK4 782 aa9.13□□□□□ -0.95
TVP23B-203ENST00000482741 RBCK1Q9BYM8 510 aa9.13□□□□□ -0.95
TVP23B-203ENST00000482741 ZCCHC17Q9NP64 241 aaKnown RBP9.13□□□□□ -0.95
TVP23B-203ENST00000482741 DOLKQ9UPQ8 538 aa9.13□□□□□ -0.95
TVP23B-203ENST00000482741 MYH7BA7E2Y1 1941 aa9.13□□□□□ -0.95
TVP23B-203ENST00000482741 COL4A4P53420 1690 aaPredicted RBP9.13□□□□□ -0.95
TVP23B-203ENST00000482741 RFC4P35249 363 aa9.13□□□□□ -0.95
TVP23B-203ENST00000482741 NECTIN1Q15223 517 aa9.13□□□□□ -0.95
TVP23B-203ENST00000482741 AMOTL1Q8IY63 956 aa9.13□□□□□ -0.95
TVP23B-203ENST00000482741 MTMR8Q96EF0 704 aa9.13□□□□□ -0.95
TVP23B-203ENST00000482741 ZDHHC15Q96MV8 337 aa9.13□□□□□ -0.95
TVP23B-203ENST00000482741 NOL10Q9BSC4 688 aaKnown RBP9.13□□□□□ -0.95
TVP23B-203ENST00000482741 PPEF1O14829 653 aaPredicted RBP9.13□□□□□ -0.95
TVP23B-203ENST00000482741 DNAJB2P25686 324 aa9.13□□□□□ -0.95
TVP23B-203ENST00000482741 GNA15P30679 374 aa9.13□□□□□ -0.95
TVP23B-203ENST00000482741 IFIT5Q13325 482 aaKnown RBP9.13□□□□□ -0.95
TVP23B-203ENST00000482741 SF3B2Q13435 895 aaKnown RBP9.13□□□□□ -0.95
TVP23B-203ENST00000482741 SQSTM1Q13501 440 aa9.13□□□□□ -0.95
TVP23B-203ENST00000482741 SERINC3Q13530 473 aa9.13□□□□□ -0.95
TVP23B-203ENST00000482741 FAM89AQ96GI7 184 aa9.13□□□□□ -0.95
TVP23B-203ENST00000482741 NLRP3Q96P20 1036 aa9.13□□□□□ -0.95
TVP23B-203ENST00000482741 BMP2KQ9NSY1 1161 aaPredicted RBP9.13□□□□□ -0.95
TVP23B-203ENST00000482741 SEPT9Q9UHD8 586 aaPredicted RBP9.13□□□□□ -0.95
TVP23B-203ENST00000482741 RALGAPA2Q2PPJ7 1873 aa9.12□□□□□ -0.95
TVP23B-203ENST00000482741 FRMPD4Q14CM0 1322 aa9.12□□□□□ -0.95
TVP23B-203ENST00000482741 NEK3P51956 506 aa9.12□□□□□ -0.95
TVP23B-203ENST00000482741 RPS8P62241 208 aaKnown RBP9.12□□□□□ -0.95
TVP23B-203ENST00000482741 GABPAQ06546 454 aa9.12□□□□□ -0.95
TVP23B-203ENST00000482741 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.12□□□□□ -0.95
TVP23B-203ENST00000482741 TTC14Q96N46 770 aa9.12□□□□□ -0.95
TVP23B-203ENST00000482741 PPT2Q9UMR5 302 aa9.12□□□□□ -0.95
TVP23B-203ENST00000482741 NIP7Q9Y221 180 aaKnown RBP eCLIP9.12□□□□□ -0.95
TVP23B-203ENST00000482741 PLIN1O60240 522 aa9.12□□□□□ -0.95
TVP23B-203ENST00000482741 FZD6O60353 706 aa9.12□□□□□ -0.95
TVP23B-203ENST00000482741 CDC27P30260 824 aa9.12□□□□□ -0.95
TVP23B-203ENST00000482741 GCGRP47871 477 aa9.12□□□□□ -0.95
TVP23B-203ENST00000482741 DSC3Q14574 896 aa9.12□□□□□ -0.95
TVP23B-203ENST00000482741 FAM83AQ86UY5 434 aa9.12□□□□□ -0.95
TVP23B-203ENST00000482741 ITPRIPQ8IWB1 547 aa9.12□□□□□ -0.95
TVP23B-203ENST00000482741 TBC1D16Q8TBP0 767 aa9.12□□□□□ -0.95
TVP23B-203ENST00000482741 FAM84BQ96KN1 310 aaPredicted RBP9.12□□□□□ -0.95
TVP23B-203ENST00000482741 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.12□□□□□ -0.95
TVP23B-203ENST00000482741 CCDC171Q6TFL3 1326 aa9.11□□□□□ -0.95
TVP23B-203ENST00000482741 SLC26A4O43511 780 aa9.11□□□□□ -0.95
TVP23B-203ENST00000482741 CHMLP26374 656 aa9.11□□□□□ -0.95
TVP23B-203ENST00000482741 FAM160A1Q05DH4 1040 aa9.11□□□□□ -0.95
TVP23B-203ENST00000482741 CUL4AQ13619 759 aa9.11□□□□□ -0.95
TVP23B-203ENST00000482741 CC2D1AQ6P1N0 951 aaPredicted RBP9.11□□□□□ -0.95
TVP23B-203ENST00000482741 EYA3Q99504 573 aa9.11□□□□□ -0.95
TVP23B-203ENST00000482741 MCCP23508 829 aa9.11□□□□□ -0.95
TVP23B-203ENST00000482741 RBM10P98175 930 aaKnown RBP9.11□□□□□ -0.95
TVP23B-203ENST00000482741 CHRNDQ07001 517 aa9.11□□□□□ -0.95
TVP23B-203ENST00000482741 PPP2R5BQ15173 497 aa9.11□□□□□ -0.95
TVP23B-203ENST00000482741 KANK3Q6NY19 840 aa9.11□□□□□ -0.95
TVP23B-203ENST00000482741 DDX42Q86XP3 938 aaKnown RBP eCLIP9.11□□□□□ -0.95
TVP23B-203ENST00000482741 ZNF384Q8TF68 577 aa9.11□□□□□ -0.95
TVP23B-203ENST00000482741 STK36Q9NRP7 1315 aa9.11□□□□□ -0.95
TVP23B-203ENST00000482741 TSPAN6O43657 245 aa9.11□□□□□ -0.95
TVP23B-203ENST00000482741 MYCLP1P12525 358 aaPredicted RBP9.11□□□□□ -0.95
TVP23B-203ENST00000482741 PPP4R3BQ5MIZ7 849 aa9.11□□□□□ -0.95
TVP23B-203ENST00000482741 LMBR1LQ6UX01 489 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms