RNA–Protein interactions for RNA: ENST00000482542.5

SFXN5-215, Transcript of sideroflexin 5, humanhuman

TSL 4

Gene SFXN5, Length 546 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-215ENST00000482542 KCTD2Q14681 263 aa16.82■□□□□ 0.28
SFXN5-215ENST00000482542 GJC2Q5T442 439 aaPredicted RBP16.82■□□□□ 0.28
SFXN5-215ENST00000482542 SAMD1Q6SPF0 538 aaPredicted RBP16.82■□□□□ 0.28
SFXN5-215ENST00000482542 RIOX2Q8IUF8 465 aa16.82■□□□□ 0.28
SFXN5-215ENST00000482542 CLEC10AQ8IUN9 316 aa16.82■□□□□ 0.28
SFXN5-215ENST00000482542 KBTBD3Q8NAB2 608 aa16.82■□□□□ 0.28
SFXN5-215ENST00000482542 SLC17A8Q8NDX2 589 aa16.82■□□□□ 0.28
SFXN5-215ENST00000482542 MAML3Q96JK9 1138 aa16.82■□□□□ 0.28
SFXN5-215ENST00000482542 MMP19Q99542 508 aa16.82■□□□□ 0.28
SFXN5-215ENST00000482542 PPP1R9AQ9ULJ8 1098 aa16.82■□□□□ 0.28
SFXN5-215ENST00000482542 VWA5AO00534 786 aa16.81■□□□□ 0.28
SFXN5-215ENST00000482542 RAD21O60216 631 aa16.81■□□□□ 0.28
SFXN5-215ENST00000482542 SMARCA5O60264 1052 aaPredicted RBP16.81■□□□□ 0.28
SFXN5-215ENST00000482542 GNAT2P19087 354 aa16.81■□□□□ 0.28
SFXN5-215ENST00000482542 DCTPP1Q9H773 170 aa16.81■□□□□ 0.28
SFXN5-215ENST00000482542 NAV1Q8NEY1 1877 aa16.8■□□□□ 0.28
SFXN5-215ENST00000482542 RNF113AO15541 343 aaKnown RBP16.8■□□□□ 0.28
SFXN5-215ENST00000482542 CHGBP05060 677 aa16.8■□□□□ 0.28
SFXN5-215ENST00000482542 RTP1P59025 263 aa16.8■□□□□ 0.28
SFXN5-215ENST00000482542 C20orf194Q5TEA3 1177 aa16.8■□□□□ 0.28
SFXN5-215ENST00000482542 SLC39A5Q6ZMH5 540 aa16.8■□□□□ 0.28
SFXN5-215ENST00000482542 APPBP2Q92624 585 aa16.8■□□□□ 0.28
SFXN5-215ENST00000482542 NYAP2Q9P242 653 aa16.8■□□□□ 0.28
SFXN5-215ENST00000482542 GSG1L2A8MUP6 293 aa16.79■□□□□ 0.28
SFXN5-215ENST00000482542 SMIM22K7EJ46 135 aa16.79■□□□□ 0.28
SFXN5-215ENST00000482542 RARBP10826 455 aa16.79■□□□□ 0.28
SFXN5-215ENST00000482542 PRAMEF19Q5SWL8 479 aa16.79■□□□□ 0.28
SFXN5-215ENST00000482542 FAM83BQ5T0W9 1011 aa16.79■□□□□ 0.28
SFXN5-215ENST00000482542 ZNF444Q8N0Y2 327 aaPredicted RBP16.79■□□□□ 0.28
SFXN5-215ENST00000482542 TINF2Q9BSI4 451 aa16.79■□□□□ 0.28
SFXN5-215ENST00000482542 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.79■□□□□ 0.28
SFXN5-215ENST00000482542 FBXO28Q9NVF7 368 aa16.79■□□□□ 0.28
SFXN5-215ENST00000482542 ATP11BQ9Y2G3 1177 aa16.79■□□□□ 0.28
SFXN5-215ENST00000482542 LAMA3Q16787 3333 aa16.79■□□□□ 0.28
SFXN5-215ENST00000482542 MINDY4BA8MYZ0 360 aa16.78■□□□□ 0.28
SFXN5-215ENST00000482542 MYCNP04198 464 aaPredicted RBP16.78■□□□□ 0.28
SFXN5-215ENST00000482542 RASA1P20936 1047 aa16.78■□□□□ 0.28
SFXN5-215ENST00000482542 LRRC41Q15345 812 aa16.78■□□□□ 0.28
SFXN5-215ENST00000482542 ZNF792Q3KQV3 632 aa16.78■□□□□ 0.28
SFXN5-215ENST00000482542 C1orf53Q5VUE5 145 aa16.78■□□□□ 0.28
SFXN5-215ENST00000482542 RNF180Q86T96 592 aa16.78■□□□□ 0.28
SFXN5-215ENST00000482542 MSL3Q8N5Y2 521 aaKnown RBP16.78■□□□□ 0.28
SFXN5-215ENST00000482542 PRPF38AQ8NAV1 312 aaKnown RBP16.78■□□□□ 0.28
SFXN5-215ENST00000482542 OSBP2Q969R2 916 aa16.78■□□□□ 0.28
SFXN5-215ENST00000482542 SLF1Q9BQI6 1058 aa16.78■□□□□ 0.28
SFXN5-215ENST00000482542 TEX13BQ9BXU2 312 aa16.78■□□□□ 0.28
SFXN5-215ENST00000482542 ZNF214Q9UL59 606 aaPredicted RBP16.78■□□□□ 0.28
SFXN5-215ENST00000482542 SYNPO2Q9UMS6 1093 aa16.78■□□□□ 0.28
SFXN5-215ENST00000482542 STXBP5LQ9Y2K9 1186 aa16.78■□□□□ 0.28
SFXN5-215ENST00000482542 ALPK3Q96L96 1907 aa16.78■□□□□ 0.28
SFXN5-215ENST00000482542 F5H6K3 240 aa16.77■□□□□ 0.28
SFXN5-215ENST00000482542 APPP05067 770 aa16.77■□□□□ 0.28
SFXN5-215ENST00000482542 ADCYAP1R1P41586 468 aa16.77■□□□□ 0.28
SFXN5-215ENST00000482542 TDO2P48775 406 aa16.77■□□□□ 0.28
SFXN5-215ENST00000482542 KLRC3Q07444 240 aa16.77■□□□□ 0.28
SFXN5-215ENST00000482542 SNX17Q15036 470 aa16.77■□□□□ 0.28
SFXN5-215ENST00000482542 ANO1Q5XXA6 986 aa16.77■□□□□ 0.28
SFXN5-215ENST00000482542 FAM109BQ6ICB4 259 aaPredicted RBP16.77■□□□□ 0.28
SFXN5-215ENST00000482542 NACAP1Q9BZK3 213 aa16.77■□□□□ 0.28
SFXN5-215ENST00000482542 XPNPEP3Q9NQH7 507 aa16.77■□□□□ 0.28
SFXN5-215ENST00000482542 MTMR10Q9NXD2 777 aa16.77■□□□□ 0.28
SFXN5-215ENST00000482542 CNPY2Q9Y2B0 182 aa16.77■□□□□ 0.28
SFXN5-215ENST00000482542 CTDP1Q9Y5B0 961 aaPredicted RBP16.77■□□□□ 0.28
SFXN5-215ENST00000482542 ZNF236Q9UL36 1845 aa16.77■□□□□ 0.27
SFXN5-215ENST00000482542 PATL2C9JE40 543 aaKnown RBP16.76■□□□□ 0.27
SFXN5-215ENST00000482542 ERC2O15083 957 aa16.76■□□□□ 0.27
SFXN5-215ENST00000482542 GPAA1O43292 621 aa16.76■□□□□ 0.27
SFXN5-215ENST00000482542 ZBED4O75132 1171 aa16.76■□□□□ 0.27
SFXN5-215ENST00000482542 PGK2P07205 417 aa16.76■□□□□ 0.27
SFXN5-215ENST00000482542 REPS2Q8NFH8 660 aa16.76■□□□□ 0.27
SFXN5-215ENST00000482542 MKL1Q969V6 931 aa16.76■□□□□ 0.27
SFXN5-215ENST00000482542 DDX11Q96FC9 970 aa16.76■□□□□ 0.27
SFXN5-215ENST00000482542 CLIP2Q9UDT6 1046 aa16.76■□□□□ 0.27
SFXN5-215ENST00000482542 ROBO3Q96MS0 1386 aa16.76■□□□□ 0.27
SFXN5-215ENST00000482542 TTC41PQ6P2S7 1318 aa16.75■□□□□ 0.27
SFXN5-215ENST00000482542 ATP2A1O14983 1001 aa16.75■□□□□ 0.27
SFXN5-215ENST00000482542 NDUFB10O96000 172 aa16.75■□□□□ 0.27
SFXN5-215ENST00000482542 SLC3A2P08195 630 aaKnown RBP16.75■□□□□ 0.27
SFXN5-215ENST00000482542 AKR1A1P14550 325 aa16.75■□□□□ 0.27
SFXN5-215ENST00000482542 FAM47AQ5JRC9 791 aa16.75■□□□□ 0.27
SFXN5-215ENST00000482542 SNRNP48Q6IEG0 339 aaKnown RBP16.75■□□□□ 0.27
SFXN5-215ENST00000482542 Q7L0L9 218 aa16.75■□□□□ 0.27
SFXN5-215ENST00000482542 PHF24Q9UPV7 400 aa16.75■□□□□ 0.27
SFXN5-215ENST00000482542 POTEB2H3BUK9 544 aa16.74■□□□□ 0.27
SFXN5-215ENST00000482542 PDE4BQ07343 736 aa16.74■□□□□ 0.27
SFXN5-215ENST00000482542 TRIM60Q495X7 471 aa16.74■□□□□ 0.27
SFXN5-215ENST00000482542 PPP4R3BQ5MIZ7 849 aa16.74■□□□□ 0.27
SFXN5-215ENST00000482542 STK11IPQ8N1F8 1099 aa16.74■□□□□ 0.27
SFXN5-215ENST00000482542 FERMT2Q96AC1 680 aa16.74■□□□□ 0.27
SFXN5-215ENST00000482542 TSEN34Q9BSV6 310 aaKnown RBP16.74■□□□□ 0.27
SFXN5-215ENST00000482542 PRDM5Q9NQX1 630 aaPredicted RBP16.74■□□□□ 0.27
SFXN5-215ENST00000482542 MTMR4Q9NYA4 1195 aa16.74■□□□□ 0.27
SFXN5-215ENST00000482542 FBXO40Q9UH90 709 aa16.74■□□□□ 0.27
SFXN5-215ENST00000482542 FEM1BQ9UK73 627 aa16.74■□□□□ 0.27
SFXN5-215ENST00000482542 FAM184BQ9ULE4 1060 aa16.74■□□□□ 0.27
SFXN5-215ENST00000482542 TACC3Q9Y6A5 838 aa16.74■□□□□ 0.27
SFXN5-215ENST00000482542 A0A0G2JMZ2 1700 aa16.73■□□□□ 0.27
SFXN5-215ENST00000482542 SYNGAP1Q96PV0 1343 aa16.73■□□□□ 0.27
SFXN5-215ENST00000482542 IGKV6D-41A0A0C4DH26 115 aa16.73■□□□□ 0.27
SFXN5-215ENST00000482542 TTLL1O95922 423 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms