RNA–Protein interactions for RNA: ENST00000481605.5

TTC3-217, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 1,540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-217ENST00000481605 PRDM1O75626 825 aa28.02■■■□□ 2.08
TTC3-217ENST00000481605 TMEM132BQ14DG7 1078 aa28.02■■■□□ 2.08
TTC3-217ENST00000481605 ZNF444Q8N0Y2 327 aaPredicted RBP28.02■■■□□ 2.08
TTC3-217ENST00000481605 NYAP2Q9P242 653 aa28.02■■■□□ 2.08
TTC3-217ENST00000481605 ADAMTS5Q9UNA0 930 aa28.02■■■□□ 2.08
TTC3-217ENST00000481605 PARP14Q460N5 1801 aa28.01■■■□□ 2.08
TTC3-217ENST00000481605 CYP2C19P33261 490 aa28.01■■■□□ 2.07
TTC3-217ENST00000481605 FXR1P51114 621 aaKnown RBP eCLIP28.01■■■□□ 2.07
TTC3-217ENST00000481605 NAPBQ9H115 298 aa28■■■□□ 2.07
TTC3-217ENST00000481605 RBM27Q9P2N5 1060 aaKnown RBP28■■■□□ 2.07
TTC3-217ENST00000481605 PPP1R9AQ9ULJ8 1098 aa28■■■□□ 2.07
TTC3-217ENST00000481605 ZNF236Q9UL36 1845 aa28■■■□□ 2.07
TTC3-217ENST00000481605 COBLO75128 1261 aa27.99■■■□□ 2.07
TTC3-217ENST00000481605 ABRAQ8N0Z2 381 aa27.99■■■□□ 2.07
TTC3-217ENST00000481605 CLIP2Q9UDT6 1046 aa27.99■■■□□ 2.07
TTC3-217ENST00000481605 STAP2Q9UGK3 403 aa27.99■■■□□ 2.07
TTC3-217ENST00000481605 RANBP2P49792 3224 aaKnown RBP27.99■■■□□ 2.07
TTC3-217ENST00000481605 IGKV6D-41A0A0C4DH26 115 aa27.98■■■□□ 2.07
TTC3-217ENST00000481605 F5H6K3 240 aa27.98■■■□□ 2.07
TTC3-217ENST00000481605 VWA5AO00534 786 aa27.98■■■□□ 2.07
TTC3-217ENST00000481605 SLC25A27O95847 323 aa27.98■■■□□ 2.07
TTC3-217ENST00000481605 IGHA2P01877 340 aa27.98■■■□□ 2.07
TTC3-217ENST00000481605 CNGA1P29973 690 aa27.98■■■□□ 2.07
TTC3-217ENST00000481605 KLRC3Q07444 240 aa27.98■■■□□ 2.07
TTC3-217ENST00000481605 OLFML2BQ68BL8 750 aa27.98■■■□□ 2.07
TTC3-217ENST00000481605 NUP88Q99567 741 aaPredicted RBP27.98■■■□□ 2.07
TTC3-217ENST00000481605 ALPK3Q96L96 1907 aa27.98■■■□□ 2.07
TTC3-217ENST00000481605 PDE1AP54750 535 aa27.97■■■□□ 2.07
TTC3-217ENST00000481605 C7orf61Q8IZ16 206 aa27.97■■■□□ 2.07
TTC3-217ENST00000481605 EVI5LQ96CN4 794 aa27.97■■■□□ 2.07
TTC3-217ENST00000481605 SLC5A4Q9NY91 659 aa27.97■■■□□ 2.07
TTC3-217ENST00000481605 DDX20Q9UHI6 824 aaKnown RBP27.97■■■□□ 2.07
TTC3-217ENST00000481605 PFASO15067 1338 aa27.97■■■□□ 2.07
TTC3-217ENST00000481605 NDUFB10O96000 172 aa27.97■■■□□ 2.07
TTC3-217ENST00000481605 FCER1AP12319 257 aa27.97■■■□□ 2.07
TTC3-217ENST00000481605 PDE4BQ07343 736 aa27.97■■■□□ 2.07
TTC3-217ENST00000481605 CCDC129Q6ZRS4 1044 aa27.97■■■□□ 2.07
TTC3-217ENST00000481605 RIOX2Q8IUF8 465 aa27.97■■■□□ 2.07
TTC3-217ENST00000481605 CEP95Q96GE4 821 aa27.97■■■□□ 2.07
TTC3-217ENST00000481605 COL11A1P12107 1806 aaPredicted RBP27.96■■■□□ 2.07
TTC3-217ENST00000481605 SLC3A2P08195 630 aaKnown RBP27.96■■■□□ 2.07
TTC3-217ENST00000481605 PPARAQ07869 468 aa27.96■■■□□ 2.07
TTC3-217ENST00000481605 TRPV1Q8NER1 839 aa27.96■■■□□ 2.07
TTC3-217ENST00000481605 PRO3102Q9H379 93 aa27.96■■■□□ 2.07
TTC3-217ENST00000481605 MTMR4Q9NYA4 1195 aa27.96■■■□□ 2.07
TTC3-217ENST00000481605 MSCO60682 206 aa27.95■■■□□ 2.06
TTC3-217ENST00000481605 COL6A1P12109 1028 aa27.95■■■□□ 2.06
TTC3-217ENST00000481605 CYBAP13498 195 aa27.95■■■□□ 2.06
TTC3-217ENST00000481605 STAT3P40763 770 aa27.95■■■□□ 2.06
TTC3-217ENST00000481605 AAMPQ13685 434 aa27.95■■■□□ 2.06
TTC3-217ENST00000481605 REPS2Q8NFH8 660 aa27.95■■■□□ 2.06
TTC3-217ENST00000481605 SLF1Q9BQI6 1058 aa27.95■■■□□ 2.06
TTC3-217ENST00000481605 ZNF214Q9UL59 606 aaPredicted RBP27.95■■■□□ 2.06
TTC3-217ENST00000481605 TSPY3P0CV98 308 aa27.94■■■□□ 2.06
TTC3-217ENST00000481605 TSPY8P0CW00 308 aa27.94■■■□□ 2.06
TTC3-217ENST00000481605 MKL1Q969V6 931 aa27.94■■■□□ 2.06
TTC3-217ENST00000481605 FOXP2O15409 715 aa27.93■■■□□ 2.06
TTC3-217ENST00000481605 TTLL1O95922 423 aa27.93■■■□□ 2.06
TTC3-217ENST00000481605 FAM47AQ5JRC9 791 aa27.93■■■□□ 2.06
TTC3-217ENST00000481605 MMP19Q99542 508 aa27.93■■■□□ 2.06
TTC3-217ENST00000481605 PCDH10Q9P2E7 1040 aa27.93■■■□□ 2.06
TTC3-217ENST00000481605 FRMPD3Q5JV73 1810 aa27.93■■■□□ 2.06
TTC3-217ENST00000481605 PLIN4Q96Q06 1357 aa27.92■■■□□ 2.06
TTC3-217ENST00000481605 NEDD1Q8NHV4 660 aa27.92■■■□□ 2.06
TTC3-217ENST00000481605 MAML3Q96JK9 1138 aa27.92■■■□□ 2.06
TTC3-217ENST00000481605 LNPKQ9C0E8 428 aa27.92■■■□□ 2.06
TTC3-217ENST00000481605 TFAP4Q01664 338 aa27.92■■■□□ 2.06
TTC3-217ENST00000481605 LRRC47Q8N1G4 583 aaKnown RBP27.92■■■□□ 2.06
TTC3-217ENST00000481605 PRPF38AQ8NAV1 312 aaKnown RBP27.92■■■□□ 2.06
TTC3-217ENST00000481605 ZMYND8Q9ULU4 1186 aaPredicted RBP27.92■■■□□ 2.06
TTC3-217ENST00000481605 SYNPO2Q9UMS6 1093 aa27.92■■■□□ 2.06
TTC3-217ENST00000481605 MYH4Q9Y623 1939 aa27.91■■■□□ 2.06
TTC3-217ENST00000481605 COPB2P35606 906 aa27.91■■■□□ 2.06
TTC3-217ENST00000481605 KCTD2Q14681 263 aa27.91■■■□□ 2.06
TTC3-217ENST00000481605 VPS53Q5VIR6 699 aa27.91■■■□□ 2.06
TTC3-217ENST00000481605 RWDD1Q9H446 243 aaPredicted RBP27.91■■■□□ 2.06
TTC3-217ENST00000481605 TRIOBPQ9H2D6 2365 aa27.9■■■□□ 2.06
TTC3-217ENST00000481605 PGK2P07205 417 aa27.9■■■□□ 2.06
TTC3-217ENST00000481605 HELLSQ9NRZ9 838 aa27.9■■■□□ 2.06
TTC3-217ENST00000481605 CTDSPL2Q05D32 466 aa27.89■■■□□ 2.06
TTC3-217ENST00000481605 PRAMEF19Q5SWL8 479 aa27.89■■■□□ 2.06
TTC3-217ENST00000481605 B4GALNT3Q6L9W6 998 aa27.89■■■□□ 2.06
TTC3-217ENST00000481605 SMC5Q8IY18 1101 aa27.89■■■□□ 2.06
TTC3-217ENST00000481605 GMCL1P1Q8NEA9 526 aa27.89■■■□□ 2.06
TTC3-217ENST00000481605 TEX13BQ9BXU2 312 aa27.89■■■□□ 2.06
TTC3-217ENST00000481605 SEPT4O43236 478 aa27.88■■■□□ 2.05
TTC3-217ENST00000481605 SYN1P17600 705 aa27.88■■■□□ 2.05
TTC3-217ENST00000481605 LRRC26Q2I0M4 334 aa27.88■■■□□ 2.05
TTC3-217ENST00000481605 ANO1Q5XXA6 986 aa27.88■■■□□ 2.05
TTC3-217ENST00000481605 SNRNP48Q6IEG0 339 aaKnown RBP27.88■■■□□ 2.05
TTC3-217ENST00000481605 KIFC2Q96AC6 838 aa27.88■■■□□ 2.05
TTC3-217ENST00000481605 FAM227BQ96M60 508 aa27.88■■■□□ 2.05
TTC3-217ENST00000481605 SENP6Q9GZR1 1112 aaPredicted RBP27.88■■■□□ 2.05
TTC3-217ENST00000481605 DNAH12Q6ZR08 3092 aa27.88■■■□□ 2.05
TTC3-217ENST00000481605 INCENPQ9NQS7 918 aa27.87■■■□□ 2.05
TTC3-217ENST00000481605 FEM1BQ9UK73 627 aa27.87■■■□□ 2.05
TTC3-217ENST00000481605 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.87■■■□□ 2.055e-6■□□□□ 9.7
TTC3-217ENST00000481605 ZNFX1Q9P2E3 1918 aaKnown RBP27.87■■■□□ 2.05
TTC3-217ENST00000481605 DNM1LO00429 736 aa27.87■■■□□ 2.05
TTC3-217ENST00000481605 ZBED4O75132 1171 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms