RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 RAPGEF3O95398 923 aa11.5□□□□□ -0.57
PRPF4B-206ENST00000481109 CD97P48960 835 aa11.5□□□□□ -0.57
PRPF4B-206ENST00000481109 MAP7D1Q3KQU3 841 aa11.5□□□□□ -0.57
PRPF4B-206ENST00000481109 PPP4R3AQ6IN85 833 aa11.5□□□□□ -0.57
PRPF4B-206ENST00000481109 VSTM4Q8IW00 320 aa11.5□□□□□ -0.57
PRPF4B-206ENST00000481109 FNBP4Q8N3X1 1017 aaPredicted RBP11.5□□□□□ -0.57
PRPF4B-206ENST00000481109 AZIN2Q96A70 460 aa11.5□□□□□ -0.57
PRPF4B-206ENST00000481109 PGBD1Q96JS3 809 aa11.5□□□□□ -0.57
PRPF4B-206ENST00000481109 FAM184BQ9ULE4 1060 aa11.5□□□□□ -0.57
PRPF4B-206ENST00000481109 TTLL3Q9Y4R7 772 aa11.5□□□□□ -0.57
PRPF4B-206ENST00000481109 LRRC42Q9Y546 428 aa11.5□□□□□ -0.57
PRPF4B-206ENST00000481109 STK24Q9Y6E0 443 aa11.5□□□□□ -0.57
PRPF4B-206ENST00000481109 TBC1D12O60347 775 aa11.5□□□□□ -0.57
PRPF4B-206ENST00000481109 CCT6AP40227 531 aaKnown RBP11.5□□□□□ -0.57
PRPF4B-206ENST00000481109 MLH1P40692 756 aa11.5□□□□□ -0.57
PRPF4B-206ENST00000481109 POLE2P56282 527 aa11.5□□□□□ -0.57
PRPF4B-206ENST00000481109 NEUROD2Q15784 382 aa11.5□□□□□ -0.57
PRPF4B-206ENST00000481109 CCT6BQ92526 530 aa11.5□□□□□ -0.57
PRPF4B-206ENST00000481109 SNX27Q96L92 541 aa11.5□□□□□ -0.57
PRPF4B-206ENST00000481109 OSBPL10Q9BXB5 764 aa11.5□□□□□ -0.57
PRPF4B-206ENST00000481109 KCNMB3Q9NPA1 279 aa11.5□□□□□ -0.57
PRPF4B-206ENST00000481109 RRP7AQ9Y3A4 280 aaKnown RBP11.5□□□□□ -0.57
PRPF4B-206ENST00000481109 CPSF1Q10570 1443 aaKnown RBP11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 NPATQ14207 1427 aa11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 VPS37CA5D8V6 355 aaPredicted RBP11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 IKBKBO14920 756 aa11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 PDGFRBP09619 1106 aa11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 TCF7P36402 384 aaPredicted RBP11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 PLOD1Q02809 727 aaPredicted RBP11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 TAF11Q15544 211 aa11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 CEP128Q6ZU80 1094 aa11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 ZNF365Q70YC5 407 aa11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 ZNF554Q86TJ5 538 aa11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 NOA1Q8NC60 698 aaKnown RBP11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 AENQ8WTP8 325 aaKnown RBP11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 DDX12PQ92771 950 aa11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 DDX27Q96GQ7 796 aaKnown RBP11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 EFR3BQ9Y2G0 817 aa11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 GOLGA6L10A0A0M3HER8 536 aa11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 E7ENQ6 273 aa11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 SP100P23497 879 aaPredicted RBP11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 FANCCQ00597 558 aa11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 GSTM4Q03013 218 aa11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 PTK7Q13308 1070 aa11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 PPP1R7Q15435 360 aa11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 NAA16Q6N069 864 aaPredicted RBP11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 CCNI2Q6ZMN8 369 aaPredicted RBP11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 RUFY3Q7L099 469 aa11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 KRI1Q8N9T8 703 aaKnown RBP11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 IRGQQ8WZA9 623 aa11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 RBM33Q96EV2 1170 aaKnown RBP11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 DUSP9Q99956 384 aaKnown RBP11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 FAM167BQ9BTA0 163 aa11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 HESX1Q9UBX0 185 aa11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 TUBGCP6Q96RT7 1819 aa11.49□□□□□ -0.57
PRPF4B-206ENST00000481109 TMEM110-MUSTN1A8MSY1 372 aa11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 LSM1O15116 133 aaKnown RBP11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 MAP3K13O43283 966 aa11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 RAD21O60216 631 aa11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 MYCLP1P12525 358 aaPredicted RBP11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 MDH1P40925 334 aaKnown RBP11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 CLCN2P51788 898 aa11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 AK2P54819 239 aa11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 INAQ16352 499 aa11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 SPRED3Q2MJR0 410 aa11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 GLE1Q53GS7 698 aaKnown RBP11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 TTMPQ5BVD1 217 aa11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 MAMSTRQ6ZN01 415 aa11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 CCDC125Q86Z20 511 aa11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 CCDC63Q8NA47 563 aa11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 LINS1Q8NG48 757 aa11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 SREK1Q8WXA9 508 aaKnown RBP11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 NR1H4Q96RI1 486 aaPredicted RBP11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 SYT15Q9BQS2 421 aa11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 TAOK3Q9H2K8 898 aa11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 ABCC4O15439 1325 aa11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 HTR3EA5X5Y0 456 aa11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 KDM1AO60341 852 aa11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 AKAP17AQ02040 695 aaKnown RBP11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 TBX2Q13207 712 aaPredicted RBP11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 CFAP157Q5JU67 520 aa11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 CFAP70Q5T0N1 1121 aa11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 GIGYF2Q6Y7W6 1299 aaKnown RBP11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 USP33Q8TEY7 942 aa11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 EVI5LQ96CN4 794 aa11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 NAPGQ99747 312 aaPredicted RBP11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 R3HDM2Q9Y2K5 976 aaKnown RBP11.48□□□□□ -0.57
PRPF4B-206ENST00000481109 ZCCHC11Q5TAX3 1644 aaKnown RBP11.47□□□□□ -0.57
PRPF4B-206ENST00000481109 ATP2A2P16615 1042 aaKnown RBP11.47□□□□□ -0.57
PRPF4B-206ENST00000481109 KRT9P35527 623 aa11.47□□□□□ -0.57
PRPF4B-206ENST00000481109 KLC1Q07866 573 aa11.47□□□□□ -0.57
PRPF4B-206ENST00000481109 BYSLQ13895 437 aaKnown RBP11.47□□□□□ -0.57
PRPF4B-206ENST00000481109 BCL2A1Q16548 175 aa11.47□□□□□ -0.57
PRPF4B-206ENST00000481109 TBC1D9BQ66K14 1250 aa11.47□□□□□ -0.57
PRPF4B-206ENST00000481109 OR52E8Q6IFG1 317 aa11.47□□□□□ -0.57
PRPF4B-206ENST00000481109 TMEM53Q6P2H8 277 aa11.47□□□□□ -0.57
PRPF4B-206ENST00000481109 TOGARAM2Q6ZUX3 1019 aa11.47□□□□□ -0.57
PRPF4B-206ENST00000481109 DEPTORQ8TB45 409 aa11.47□□□□□ -0.57
PRPF4B-206ENST00000481109 ABHD8Q96I13 439 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms