RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 RAD21O60216 631 aa14.49□□□□□ -0.09
SHROOM3-205ENST00000481002 PDHBP11177 359 aa14.49□□□□□ -0.09
SHROOM3-205ENST00000481002 BMP3P12645 472 aa14.49□□□□□ -0.09
SHROOM3-205ENST00000481002 TROAPQ12815 778 aa14.49□□□□□ -0.09
SHROOM3-205ENST00000481002 FAM83BQ5T0W9 1011 aa14.49□□□□□ -0.09
SHROOM3-205ENST00000481002 ASCC2Q9H1I8 757 aaPredicted RBP14.49□□□□□ -0.09
SHROOM3-205ENST00000481002 PDRG1Q9NUG6 133 aa14.49□□□□□ -0.09
SHROOM3-205ENST00000481002 CCDC69A6NI79 296 aa14.48□□□□□ -0.09
SHROOM3-205ENST00000481002 CA12O43570 354 aa14.48□□□□□ -0.09
SHROOM3-205ENST00000481002 PLA2G6O60733 806 aa14.48□□□□□ -0.09
SHROOM3-205ENST00000481002 OSBPP22059 807 aa14.48□□□□□ -0.09
SHROOM3-205ENST00000481002 SLC1A4P43007 532 aa14.48□□□□□ -0.09
SHROOM3-205ENST00000481002 EVCP57679 992 aa14.48□□□□□ -0.09
SHROOM3-205ENST00000481002 CATIPQ7Z7H3 387 aa14.48□□□□□ -0.09
SHROOM3-205ENST00000481002 ZNF654Q8IZM8 581 aa14.48□□□□□ -0.09
SHROOM3-205ENST00000481002 MAP3K14Q99558 947 aa14.48□□□□□ -0.09
SHROOM3-205ENST00000481002 NUP88Q99567 741 aaPredicted RBP14.48□□□□□ -0.09
SHROOM3-205ENST00000481002 CFHR5Q9BXR6 569 aa14.48□□□□□ -0.09
SHROOM3-205ENST00000481002 WBP1LQ9NX94 342 aa14.48□□□□□ -0.09
SHROOM3-205ENST00000481002 RNF186Q9NXI6 227 aa14.48□□□□□ -0.09
SHROOM3-205ENST00000481002 PNMA3Q9UL41 463 aa14.48□□□□□ -0.09
SHROOM3-205ENST00000481002 NEK4P51957 841 aa14.47□□□□□ -0.09
SHROOM3-205ENST00000481002 IRX3P78415 501 aaPredicted RBP14.47□□□□□ -0.09
SHROOM3-205ENST00000481002 FGD1P98174 961 aa14.47□□□□□ -0.09
SHROOM3-205ENST00000481002 ZNF543Q08ER8 600 aa14.47□□□□□ -0.09
SHROOM3-205ENST00000481002 TOB2Q14106 344 aaPredicted RBP14.47□□□□□ -0.09
SHROOM3-205ENST00000481002 COG2Q14746 738 aa14.47□□□□□ -0.09
SHROOM3-205ENST00000481002 TAF1CQ15572 869 aaPredicted RBP14.47□□□□□ -0.09
SHROOM3-205ENST00000481002 APOA5Q6Q788 366 aa14.47□□□□□ -0.09
SHROOM3-205ENST00000481002 NFXL1Q6ZNB6 911 aa14.47□□□□□ -0.09
SHROOM3-205ENST00000481002 RASGRP2Q7LDG7 609 aa14.47□□□□□ -0.09
SHROOM3-205ENST00000481002 IL27Q8NEV9 243 aa14.47□□□□□ -0.09
SHROOM3-205ENST00000481002 BRF1Q92994 677 aa14.47□□□□□ -0.09
SHROOM3-205ENST00000481002 P2RX7Q99572 595 aaKnown RBP14.47□□□□□ -0.09
SHROOM3-205ENST00000481002 HOXC10Q9NYD6 342 aa14.47□□□□□ -0.09
SHROOM3-205ENST00000481002 FEM1BQ9UK73 627 aa14.47□□□□□ -0.09
SHROOM3-205ENST00000481002 BRPF3Q9ULD4 1205 aa14.47□□□□□ -0.09
SHROOM3-205ENST00000481002 MTMR7Q9Y216 660 aa14.47□□□□□ -0.09
SHROOM3-205ENST00000481002 COL11A1P12107 1806 aaPredicted RBP14.47□□□□□ -0.09
SHROOM3-205ENST00000481002 MYPNQ86TC9 1320 aa14.46□□□□□ -0.09
SHROOM3-205ENST00000481002 BAZ2BQ9UIF8 2168 aaKnown RBP14.46□□□□□ -0.09
SHROOM3-205ENST00000481002 DDAH1O94760 285 aa14.46□□□□□ -0.09
SHROOM3-205ENST00000481002 DSG3P32926 999 aa14.46□□□□□ -0.09
SHROOM3-205ENST00000481002 RABEP1Q15276 862 aa14.46□□□□□ -0.09
SHROOM3-205ENST00000481002 ASPRV1Q53RT3 343 aa14.46□□□□□ -0.09
SHROOM3-205ENST00000481002 GPATCH4Q5T3I0 446 aaKnown RBP14.46□□□□□ -0.09
SHROOM3-205ENST00000481002 BTNL9Q6UXG8 535 aa14.46□□□□□ -0.09
SHROOM3-205ENST00000481002 LBX2Q6XYB7 198 aa14.46□□□□□ -0.09
SHROOM3-205ENST00000481002 KCTD1Q719H9 257 aa14.46□□□□□ -0.09
SHROOM3-205ENST00000481002 CHURC1Q8WUH1 139 aa14.46□□□□□ -0.09
SHROOM3-205ENST00000481002 PARK7Q99497 189 aaKnown RBP14.46□□□□□ -0.09
SHROOM3-205ENST00000481002 TANGO6Q9C0B7 1094 aa14.46□□□□□ -0.09
SHROOM3-205ENST00000481002 ZFYVE28Q9HCC9 887 aa14.46□□□□□ -0.09
SHROOM3-205ENST00000481002 SAGE1Q9NXZ1 904 aa14.46□□□□□ -0.09
SHROOM3-205ENST00000481002 ADAMTS5Q9UNA0 930 aa14.46□□□□□ -0.09
SHROOM3-205ENST00000481002 SLC12A7Q9Y666 1083 aa14.46□□□□□ -0.09
SHROOM3-205ENST00000481002 ADGRA2Q96PE1 1338 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 KLF18A0A0U1RQI7 1052 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 PALM3A6NDB9 673 aaPredicted RBP14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 TMEM232C9JQI7 657 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 TRPA1O75762 1119 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 FLOT1O75955 427 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 PARP1P09874 1014 aaKnown RBP14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 CALM1P0DP23 149 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 CALM2P0DP24 149 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 CALM3P0DP25 149 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 CYP2C8P10632 490 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 STAT2P52630 851 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 RCAN1P53805 252 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 HERVK_113P62684 666 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 APOBRQ0VD83 1088 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 CRHR2Q13324 411 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 GRM4Q14833 912 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 ANKRD1Q15327 319 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 CCDC96Q2M329 555 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 TTBK2Q6IQ55 1244 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 SYNE3Q6ZMZ3 975 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 FAM160B2Q86V87 743 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 PRPF38AQ8NAV1 312 aaKnown RBP14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 CHMP4CQ96CF2 233 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 GPCPD1Q9NPB8 672 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 FBXO28Q9NVF7 368 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 MAD2L2Q9UI95 211 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 PPP1R9AQ9ULJ8 1098 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 MYH6P13533 1939 aa14.45□□□□□ -0.1
SHROOM3-205ENST00000481002 FRMPD2Q68DX3 1309 aaPredicted RBP14.44□□□□□ -0.1
SHROOM3-205ENST00000481002 A0A0G2JMZ2 1700 aa14.44□□□□□ -0.1
SHROOM3-205ENST00000481002 SPDYE16A6NNV3 312 aaPredicted RBP14.44□□□□□ -0.1
SHROOM3-205ENST00000481002 TLR2O60603 784 aa14.44□□□□□ -0.1
SHROOM3-205ENST00000481002 GCLCP48506 637 aaPredicted RBP14.44□□□□□ -0.1
SHROOM3-205ENST00000481002 AK2P54819 239 aa14.44□□□□□ -0.1
SHROOM3-205ENST00000481002 POTEEQ6S8J3 1075 aa14.44□□□□□ -0.1
SHROOM3-205ENST00000481002 STAG2Q8N3U4 1231 aa14.44□□□□□ -0.1
SHROOM3-205ENST00000481002 FANCBQ8NB91 859 aa14.44□□□□□ -0.1
SHROOM3-205ENST00000481002 GTF3C2Q8WUA4 911 aaPredicted RBP14.44□□□□□ -0.1
SHROOM3-205ENST00000481002 NUP133Q8WUM0 1156 aa14.44□□□□□ -0.1
SHROOM3-205ENST00000481002 ZNF274Q96GC6 653 aaPredicted RBP14.44□□□□□ -0.1
SHROOM3-205ENST00000481002 SLF1Q9BQI6 1058 aa14.44□□□□□ -0.1
SHROOM3-205ENST00000481002 MYL10Q9BUA6 226 aa14.44□□□□□ -0.1
SHROOM3-205ENST00000481002 BEGAINQ9BUH8 593 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms