RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 PPARAQ07869 468 aa13.6□□□□□ -0.23
CCM2-213ENST00000480658 PLS1Q14651 629 aa13.6□□□□□ -0.23
CCM2-213ENST00000480658 KCTD2Q14681 263 aa13.6□□□□□ -0.23
CCM2-213ENST00000480658 NCAPG2Q86XI2 1143 aa13.6□□□□□ -0.23
CCM2-213ENST00000480658 SMC5Q8IY18 1101 aa13.6□□□□□ -0.23
CCM2-213ENST00000480658 PRPF38AQ8NAV1 312 aaKnown RBP13.6□□□□□ -0.23
CCM2-213ENST00000480658 MKL1Q969V6 931 aa13.6□□□□□ -0.23
CCM2-213ENST00000480658 TEX13BQ9BXU2 312 aa13.6□□□□□ -0.23
CCM2-213ENST00000480658 EPB41L4AQ9HCS5 686 aaPredicted RBP13.6□□□□□ -0.23
CCM2-213ENST00000480658 ADAMTS5Q9UNA0 930 aa13.6□□□□□ -0.23
CCM2-213ENST00000480658 DIS3Q9Y2L1 958 aaKnown RBP13.6□□□□□ -0.23
CCM2-213ENST00000480658 VWA5AO00534 786 aa13.59□□□□□ -0.23
CCM2-213ENST00000480658 ADORA2AP29274 412 aa13.59□□□□□ -0.23
CCM2-213ENST00000480658 OAZ1P54368 228 aa13.59□□□□□ -0.23
CCM2-213ENST00000480658 CACNB2Q08289 660 aaPredicted RBP13.59□□□□□ -0.23
CCM2-213ENST00000480658 MCMDC2Q4G0Z9 681 aa13.59□□□□□ -0.23
CCM2-213ENST00000480658 RIOX2Q8IUF8 465 aa13.59□□□□□ -0.23
CCM2-213ENST00000480658 SIAH1Q8IUQ4 282 aa13.59□□□□□ -0.23
CCM2-213ENST00000480658 MSL3Q8N5Y2 521 aaKnown RBP13.59□□□□□ -0.23
CCM2-213ENST00000480658 C11orf49Q9H6J7 331 aa13.59□□□□□ -0.23
CCM2-213ENST00000480658 MTMR4Q9NYA4 1195 aa13.59□□□□□ -0.23
CCM2-213ENST00000480658 PCDH10Q9P2E7 1040 aa13.59□□□□□ -0.23
CCM2-213ENST00000480658 FBXO40Q9UH90 709 aa13.59□□□□□ -0.23
CCM2-213ENST00000480658 FEM1BQ9UK73 627 aa13.59□□□□□ -0.23
CCM2-213ENST00000480658 TSPY2A6NKD2 308 aa13.58□□□□□ -0.24
CCM2-213ENST00000480658 TRIM6-TRIM34B2RNG4 842 aa13.58□□□□□ -0.24
CCM2-213ENST00000480658 F5H6K3 240 aa13.58□□□□□ -0.24
CCM2-213ENST00000480658 ATP2A1O14983 1001 aa13.58□□□□□ -0.24
CCM2-213ENST00000480658 ZBED4O75132 1171 aa13.58□□□□□ -0.24
CCM2-213ENST00000480658 CHGBP05060 677 aa13.58□□□□□ -0.24
CCM2-213ENST00000480658 STAT3P40763 770 aa13.58□□□□□ -0.24
CCM2-213ENST00000480658 EVX2Q03828 476 aa13.58□□□□□ -0.24
CCM2-213ENST00000480658 KLRC3Q07444 240 aa13.58□□□□□ -0.24
CCM2-213ENST00000480658 FAM83BQ5T0W9 1011 aa13.58□□□□□ -0.24
CCM2-213ENST00000480658 CHD1LQ86WJ1 897 aa13.58□□□□□ -0.24
CCM2-213ENST00000480658 NEDD1Q8NHV4 660 aa13.58□□□□□ -0.24
CCM2-213ENST00000480658 ATG4CQ96DT6 458 aa13.58□□□□□ -0.24
CCM2-213ENST00000480658 CEP95Q96GE4 821 aa13.58□□□□□ -0.24
CCM2-213ENST00000480658 PAWRQ96IZ0 340 aaKnown RBP13.58□□□□□ -0.24
CCM2-213ENST00000480658 OSBPL3Q9H4L5 887 aa13.58□□□□□ -0.24
CCM2-213ENST00000480658 ANAPC4Q9UJX5 808 aa13.58□□□□□ -0.24
CCM2-213ENST00000480658 PNMA2Q9UL42 364 aa13.58□□□□□ -0.24
CCM2-213ENST00000480658 MKI67P46013 3256 aaKnown RBP13.58□□□□□ -0.24
CCM2-213ENST00000480658 IGKV6D-41A0A0C4DH26 115 aa13.57□□□□□ -0.24
CCM2-213ENST00000480658 STAT2P52630 851 aa13.57□□□□□ -0.24
CCM2-213ENST00000480658 TMEM132BQ14DG7 1078 aa13.57□□□□□ -0.24
CCM2-213ENST00000480658 ALX1Q15699 326 aa13.57□□□□□ -0.24
CCM2-213ENST00000480658 HABP4Q5JVS0 413 aaKnown RBP13.57□□□□□ -0.24
CCM2-213ENST00000480658 POTEEQ6S8J3 1075 aa13.57□□□□□ -0.24
CCM2-213ENST00000480658 FAM160B2Q86V87 743 aa13.57□□□□□ -0.24
CCM2-213ENST00000480658 OTUD7AQ8TE49 926 aaPredicted RBP13.57□□□□□ -0.24
CCM2-213ENST00000480658 GMCL1Q96IK5 515 aa13.57□□□□□ -0.24
CCM2-213ENST00000480658 MMP19Q99542 508 aa13.57□□□□□ -0.24
CCM2-213ENST00000480658 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.57□□□□□ -0.24
CCM2-213ENST00000480658 RNF41Q9H4P4 317 aaPredicted RBP13.57□□□□□ -0.24
CCM2-213ENST00000480658 CLIP2Q9UDT6 1046 aa13.57□□□□□ -0.24
CCM2-213ENST00000480658 DDX20Q9UHI6 824 aaKnown RBP13.57□□□□□ -0.24
CCM2-213ENST00000480658 PARP14Q460N5 1801 aa13.56□□□□□ -0.24
CCM2-213ENST00000480658 H0YGN5 161 aa13.56□□□□□ -0.24
CCM2-213ENST00000480658 DNM1LO00429 736 aa13.56□□□□□ -0.24
CCM2-213ENST00000480658 PLA2G6O60733 806 aa13.56□□□□□ -0.24
CCM2-213ENST00000480658 NDUFB10O96000 172 aa13.56□□□□□ -0.24
CCM2-213ENST00000480658 NUCB1Q02818 461 aa13.56□□□□□ -0.24
CCM2-213ENST00000480658 RCSD1Q6JBY9 416 aa13.56□□□□□ -0.24
CCM2-213ENST00000480658 CLEC10AQ8IUN9 316 aa13.56□□□□□ -0.24
CCM2-213ENST00000480658 ARRDC4Q8NCT1 418 aa13.56□□□□□ -0.24
CCM2-213ENST00000480658 CHURC1Q8WUH1 139 aa13.56□□□□□ -0.24
CCM2-213ENST00000480658 LNPKQ9C0E8 428 aa13.56□□□□□ -0.24
CCM2-213ENST00000480658 ZNF214Q9UL59 606 aaPredicted RBP13.56□□□□□ -0.24
CCM2-213ENST00000480658 RLFQ13129 1914 aa13.55□□□□□ -0.24
CCM2-213ENST00000480658 SEPT4O43236 478 aa13.55□□□□□ -0.24
CCM2-213ENST00000480658 ORC4O43929 436 aa13.55□□□□□ -0.24
CCM2-213ENST00000480658 PRDM1O75626 825 aa13.55□□□□□ -0.24
CCM2-213ENST00000480658 BMP3P12645 472 aa13.55□□□□□ -0.24
CCM2-213ENST00000480658 CNGA1P29973 690 aa13.55□□□□□ -0.24
CCM2-213ENST00000480658 TFAP4Q01664 338 aa13.55□□□□□ -0.24
CCM2-213ENST00000480658 TRIM32Q13049 653 aa13.55□□□□□ -0.24
CCM2-213ENST00000480658 CCL14Q16627 93 aa13.55□□□□□ -0.24
CCM2-213ENST00000480658 KIAA1755Q5JYT7 1200 aa13.55□□□□□ -0.24
CCM2-213ENST00000480658 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.55□□□□□ -0.24
CCM2-213ENST00000480658 CHST13Q8NET6 341 aa13.55□□□□□ -0.24
CCM2-213ENST00000480658 MAML3Q96JK9 1138 aa13.55□□□□□ -0.24
CCM2-213ENST00000480658 SEC62Q99442 399 aaKnown RBP13.55□□□□□ -0.24
CCM2-213ENST00000480658 STX8Q9UNK0 236 aa13.55□□□□□ -0.24
CCM2-213ENST00000480658 CCDC171Q6TFL3 1326 aa13.55□□□□□ -0.24
CCM2-213ENST00000480658 PEX10O60683 326 aa13.54□□□□□ -0.24
CCM2-213ENST00000480658 CYBAP13498 195 aa13.54□□□□□ -0.24
CCM2-213ENST00000480658 CCND3P30281 292 aaPredicted RBP13.54□□□□□ -0.24
CCM2-213ENST00000480658 SLC1A4P43007 532 aa13.54□□□□□ -0.24
CCM2-213ENST00000480658 TKFCQ3LXA3 575 aa13.54□□□□□ -0.24
CCM2-213ENST00000480658 CCDC178Q5BJE1 867 aa13.54□□□□□ -0.24
CCM2-213ENST00000480658 LHX8Q68G74 356 aa13.54□□□□□ -0.24
CCM2-213ENST00000480658 SNRNP48Q6IEG0 339 aaKnown RBP13.54□□□□□ -0.24
CCM2-213ENST00000480658 SAMD1Q6SPF0 538 aaPredicted RBP13.54□□□□□ -0.24
CCM2-213ENST00000480658 ZNF467Q7Z7K2 595 aaPredicted RBP13.54□□□□□ -0.24
CCM2-213ENST00000480658 RILPL2Q969X0 211 aa13.54□□□□□ -0.24
CCM2-213ENST00000480658 SLC38A10Q9HBR0 1119 aa13.54□□□□□ -0.24
CCM2-213ENST00000480658 DIAPH3Q9NSV4 1193 aa13.54□□□□□ -0.24
CCM2-213ENST00000480658 CNPY2Q9Y2B0 182 aa13.54□□□□□ -0.24
CCM2-213ENST00000480658 SYNGAP1Q96PV0 1343 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms