RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 TRIM6Q9C030 488 aaPredicted RBP6.75□□□□□ -1.33
CPS1-207ENST00000479988 SMTNL1A8MU46 457 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 NR1I2O75469 434 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 KIF4AO95239 1232 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 CPA1P15085 419 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 RFX5P48382 616 aaPredicted RBP6.75□□□□□ -1.33
CPS1-207ENST00000479988 HMGCS2P54868 508 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 DYNLL1P63167 89 aaKnown RBP6.75□□□□□ -1.33
CPS1-207ENST00000479988 FSTL1Q12841 308 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 ZNF280CQ8ND82 737 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 GINM1Q9NU53 330 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 TLR7Q9NYK1 1049 aaKnown RBP6.75□□□□□ -1.33
CPS1-207ENST00000479988 TRPC6Q9Y210 931 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 LRP6O75581 1613 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 HSPD1P10809 573 aaKnown RBP6.75□□□□□ -1.33
CPS1-207ENST00000479988 GCLCP48506 637 aaPredicted RBP6.75□□□□□ -1.33
CPS1-207ENST00000479988 FOXO4P98177 505 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 CTDSPL2Q05D32 466 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 PKP1Q13835 747 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 ADCK5Q3MIX3 580 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 ABI1Q8IZP0 508 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 TCEANC2Q96MN5 208 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 AMNQ9BXJ7 453 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 TAF1DQ9H5J8 278 aaPredicted RBP6.75□□□□□ -1.33
CPS1-207ENST00000479988 TMEM63CQ9P1W3 806 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 TFIP11Q9UBB9 837 aaKnown RBP6.75□□□□□ -1.33
CPS1-207ENST00000479988 DACH1Q9UI36 760 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 TPCN1Q9ULQ1 816 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 UBN2Q6ZU65 1347 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 LTN1O94822 1766 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 NEMFO60524 1076 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 ADCY7P51828 1080 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 AMPD3Q01432 767 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 IFNLR1Q8IU57 520 aaPredicted RBP6.74□□□□□ -1.33
CPS1-207ENST00000479988 SYCP3Q8IZU3 236 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 PNMA1Q8ND90 353 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 CDCA5Q96FF9 252 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 KAZALD1Q96I82 304 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 CDHR1Q96JP9 859 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 CAPNS2Q96L46 248 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 TRIM47Q96LD4 638 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 USP54Q70EL1 1684 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 ZBBXA8MT70 800 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 E7EWF7 191 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 TMOD1P28289 359 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 RBM10P98175 930 aaKnown RBP6.74□□□□□ -1.33
CPS1-207ENST00000479988 ZFYVE27Q5T4F4 411 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 ELMSAN1Q6PJG2 1045 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 DAGLAQ9Y4D2 1042 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 CTCFP49711 727 aaPredicted RBP6.74□□□□□ -1.33
CPS1-207ENST00000479988 ASPRV1Q53RT3 343 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 USP37Q86T82 979 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 RBSNQ9H1K0 784 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 ZKSCAN5Q9Y2L8 839 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 CYP21A2P08686 494 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 STX1AQ16623 288 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 TNS4Q8IZW8 715 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 GPT2Q8TD30 523 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 SLF1Q9BQI6 1058 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 ALG1Q9BT22 464 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 LRRC2Q9BYS8 371 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 FTOQ9C0B1 505 aaKnown RBP eCLIP6.74□□□□□ -1.33
CPS1-207ENST00000479988 POLLQ9UGP5 575 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 ZNF215Q9UL58 517 aaPredicted RBP6.74□□□□□ -1.33
CPS1-207ENST00000479988 LRFN2Q9ULH4 789 aa6.74□□□□□ -1.33
CPS1-207ENST00000479988 WDR19Q8NEZ3 1342 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 CTNND1O60716 968 aaKnown RBP6.73□□□□□ -1.33
CPS1-207ENST00000479988 FKTNO75072 461 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 IDEP14735 1019 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 CYP2B6P20813 491 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 GPRC5AQ8NFJ5 357 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 SH3RF3Q8TEJ3 882 aaPredicted RBP6.73□□□□□ -1.33
CPS1-207ENST00000479988 EDC3Q96F86 508 aaKnown RBP6.73□□□□□ -1.33
CPS1-207ENST00000479988 PYM1Q9BRP8 204 aaKnown RBP6.73□□□□□ -1.33
CPS1-207ENST00000479988 ZDHHC9Q9Y397 364 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 LRRC37A3O60309 1634 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 CSF1RP07333 972 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 APOBRQ0VD83 1088 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 ODR4Q5SWX8 454 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 KRT79Q5XKE5 535 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 ZNF512BQ96KM6 892 aaPredicted RBP6.73□□□□□ -1.33
CPS1-207ENST00000479988 MMP19Q99542 508 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 DACT1Q9NYF0 836 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 CCP110O43303 1012 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 ZNF165P49910 485 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 GUCY1B3Q02153 619 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 ZNF589Q86UQ0 364 aaPredicted RBP6.73□□□□□ -1.33
CPS1-207ENST00000479988 GAS2L3Q86XJ1 694 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 FSIP1Q8NA03 581 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 TDRD7Q8NHU6 1098 aaKnown RBP6.73□□□□□ -1.33
CPS1-207ENST00000479988 LPAR1Q92633 364 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 FERMT2Q96AC1 680 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 HTATIP2Q9BUP3 242 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 RNF216Q9NWF9 866 aaPredicted RBP6.73□□□□□ -1.33
CPS1-207ENST00000479988 RPAP1Q9BWH6 1393 aaPredicted RBP6.73□□□□□ -1.33
CPS1-207ENST00000479988 SPDYE2BA6NHP3 402 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 KIF28PB7ZC32 967 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 ADM5C9JUS6 153 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 CBFA2T2O43439 604 aa6.73□□□□□ -1.33
CPS1-207ENST00000479988 SPDYE6P0CI01 402 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms