RNA–Protein interactions for RNA: ENST00000479815.5

HMGN2-208, Transcript of high mobility group nucleosomal binding domain 2, human

TSL 5

Gene HMGN2, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN2-208	ENST00000479815	VEGFA	P15692	232 aa	Predicted RBP	10.11	□□□□□ -0.79
HMGN2-208	ENST00000479815	SMARCA1	P28370	1054 aa		10.11	□□□□□ -0.79
HMGN2-208	ENST00000479815	CDC27	P30260	824 aa		10.11	□□□□□ -0.79
HMGN2-208	ENST00000479815	KIF5B	P33176	963 aa		10.11	□□□□□ -0.79
HMGN2-208	ENST00000479815	JAG1	P78504	1218 aa		10.11	□□□□□ -0.79
HMGN2-208	ENST00000479815	ICA1	Q05084	483 aa		10.11	□□□□□ -0.79
HMGN2-208	ENST00000479815	STK3	Q13188	491 aa		10.11	□□□□□ -0.79
HMGN2-208	ENST00000479815	CPLX2	Q6PUV4	134 aa	Known RBP	10.11	□□□□□ -0.79
HMGN2-208	ENST00000479815	TMTC3	Q6ZXV5	915 aa		10.11	□□□□□ -0.79
HMGN2-208	ENST00000479815	KRT26	Q7Z3Y9	468 aa		10.11	□□□□□ -0.79
HMGN2-208	ENST00000479815	SIAH1	Q8IUQ4	282 aa		10.11	□□□□□ -0.79
HMGN2-208	ENST00000479815	GMCL1P1	Q8NEA9	526 aa		10.11	□□□□□ -0.79
HMGN2-208	ENST00000479815	NCOA5	Q9HCD5	579 aa	Known RBP	10.11	□□□□□ -0.79
HMGN2-208	ENST00000479815	CABP5	Q9NP86	173 aa		10.11	□□□□□ -0.79
HMGN2-208	ENST00000479815	CHMP5	Q9NZZ3	219 aa		10.11	□□□□□ -0.79
HMGN2-208	ENST00000479815	STX8	Q9UNK0	236 aa		10.11	□□□□□ -0.79
HMGN2-208	ENST00000479815	SMC3	Q9UQE7	1217 aa		10.11	□□□□□ -0.79
HMGN2-208	ENST00000479815	ATAD5	Q96QE3	1844 aa		10.11	□□□□□ -0.79
HMGN2-208	ENST00000479815	PTPDC1	A2A3K4	754 aa		10.1	□□□□□ -0.79
HMGN2-208	ENST00000479815	PALM3	A6NDB9	673 aa	Predicted RBP	10.1	□□□□□ -0.79
HMGN2-208	ENST00000479815	GDF11	O95390	407 aa		10.1	□□□□□ -0.79
HMGN2-208	ENST00000479815	PDC	P20941	246 aa		10.1	□□□□□ -0.79
HMGN2-208	ENST00000479815	ADD1	P35611	737 aa	Known RBP	10.1	□□□□□ -0.79
HMGN2-208	ENST00000479815	GNAQ	P50148	359 aa		10.1	□□□□□ -0.79
HMGN2-208	ENST00000479815	CCT2	P78371	535 aa	Known RBP	10.1	□□□□□ -0.79
HMGN2-208	ENST00000479815	SEPT2	Q15019	361 aa		10.1	□□□□□ -0.79
HMGN2-208	ENST00000479815	MAP3K11	Q16584	847 aa		10.1	□□□□□ -0.79
HMGN2-208	ENST00000479815	SHROOM1	Q2M3G4	852 aa	Predicted RBP	10.1	□□□□□ -0.79
HMGN2-208	ENST00000479815	NBPF11	Q86T75	865 aa		10.1	□□□□□ -0.79
HMGN2-208	ENST00000479815	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
HMGN2-208	ENST00000479815	CTCFL	Q8NI51	663 aa	Predicted RBP	10.1	□□□□□ -0.79
HMGN2-208	ENST00000479815	KLRG1	Q96E93	195 aa		10.1	□□□□□ -0.79
HMGN2-208	ENST00000479815	LZTS2	Q9BRK4	669 aa		10.1	□□□□□ -0.79
HMGN2-208	ENST00000479815	MYL10	Q9BUA6	226 aa		10.1	□□□□□ -0.79
HMGN2-208	ENST00000479815	KIF3A	Q9Y496	699 aa		10.1	□□□□□ -0.79
HMGN2-208	ENST00000479815	BAZ2B	Q9UIF8	2168 aa	Known RBP	10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	OTOF	Q9HC10	1997 aa		10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	UNCX	A6NJT0	531 aa		10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	ADM5	C9JUS6	153 aa		10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	MPHOSPH10	O00566	681 aa	Known RBP	10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	CPLX1	O14810	134 aa		10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	JAK2	O60674	1132 aa		10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	PDHB	P11177	359 aa		10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	EEF2	P13639	858 aa	Known RBP	10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	FDPS	P14324	419 aa	Known RBP	10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	GJB2	P29033	226 aa		10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	NUCB2	P80303	420 aa		10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	ASPRV1	Q53RT3	343 aa		10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	CDC37L1	Q7L3B6	337 aa		10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	MIGA2	Q7L4E1	593 aa		10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	LDHD	Q86WU2	507 aa		10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	CLEC10A	Q8IUN9	316 aa		10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	SCYL3	Q8IZE3	742 aa		10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	FAM177A1	Q8N128	213 aa	Predicted RBP	10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	DCAF4	Q8WV16	495 aa		10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	CDCA5	Q96FF9	252 aa		10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	GMCL1	Q96IK5	515 aa		10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	WDR18	Q9BV38	432 aa		10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	SPZ1	Q9BXG8	430 aa		10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	RNF26	Q9BY78	433 aa	Predicted RBP	10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	SH2D4A	Q9H788	454 aa		10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	RBM27	Q9P2N5	1060 aa	Known RBP	10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	MAD2L2	Q9UI95	211 aa		10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	SCAF8	Q9UPN6	1271 aa	Known RBP	10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	TMX2	Q9Y320	296 aa		10.09	□□□□□ -0.79
HMGN2-208	ENST00000479815	CNTNAP5	Q8WYK1	1306 aa		10.08	□□□□□ -0.8
HMGN2-208	ENST00000479815	PHIP	Q8WWQ0	1821 aa		10.08	□□□□□ -0.8
HMGN2-208	ENST00000479815	FMNL1	O95466	1100 aa	Predicted RBP	10.08	□□□□□ -0.8
HMGN2-208	ENST00000479815	BRD1	O95696	1058 aa		10.08	□□□□□ -0.8
HMGN2-208	ENST00000479815	RXRA	P19793	462 aa		10.08	□□□□□ -0.8
HMGN2-208	ENST00000479815	ZNF543	Q08ER8	600 aa		10.08	□□□□□ -0.8
HMGN2-208	ENST00000479815	RAB3GAP1	Q15042	981 aa		10.08	□□□□□ -0.8
HMGN2-208	ENST00000479815	GPATCH4	Q5T3I0	446 aa	Known RBP	10.08	□□□□□ -0.8
HMGN2-208	ENST00000479815	USP48	Q86UV5	1035 aa		10.08	□□□□□ -0.8
HMGN2-208	ENST00000479815	RAB11FIP4	Q86YS3	637 aa		10.08	□□□□□ -0.8
HMGN2-208	ENST00000479815	NUP133	Q8WUM0	1156 aa		10.08	□□□□□ -0.8
HMGN2-208	ENST00000479815	ARHGEF10L	Q9HCE6	1279 aa		10.08	□□□□□ -0.8
HMGN2-208	ENST00000479815	ORC3	Q9UBD5	711 aa	Predicted RBP	10.08	□□□□□ -0.8
HMGN2-208	ENST00000479815	CLIP2	Q9UDT6	1046 aa		10.08	□□□□□ -0.8
HMGN2-208	ENST00000479815	NAP1L2	Q9ULW6	460 aa	Predicted RBP	10.08	□□□□□ -0.8
HMGN2-208	ENST00000479815		A0A1W2PRG0	241 aa		10.07	□□□□□ -0.8
HMGN2-208	ENST00000479815	PRPF3	O43395	683 aa	Known RBP	10.07	□□□□□ -0.8
HMGN2-208	ENST00000479815	PLA2G6	O60733	806 aa		10.07	□□□□□ -0.8
HMGN2-208	ENST00000479815	USP2	O75604	605 aa	Predicted RBP	10.07	□□□□□ -0.8
HMGN2-208	ENST00000479815	PLEKHA8P1	O95397	391 aa		10.07	□□□□□ -0.8
HMGN2-208	ENST00000479815	NDUFB10	O96000	172 aa		10.07	□□□□□ -0.8
HMGN2-208	ENST00000479815	PARP1	P09874	1014 aa	Known RBP	10.07	□□□□□ -0.8
HMGN2-208	ENST00000479815	SYT1	P21579	422 aa		10.07	□□□□□ -0.8
HMGN2-208	ENST00000479815	INPP5B	P32019	993 aa		10.07	□□□□□ -0.8
HMGN2-208	ENST00000479815	SLC35G1	Q2M3R5	365 aa		10.07	□□□□□ -0.8
HMGN2-208	ENST00000479815	EAPP	Q56P03	285 aa	Predicted RBP	10.07	□□□□□ -0.8
HMGN2-208	ENST00000479815	BTNL9	Q6UXG8	535 aa		10.07	□□□□□ -0.8
HMGN2-208	ENST00000479815	CLEC17A	Q6ZS10	378 aa		10.07	□□□□□ -0.8
HMGN2-208	ENST00000479815	TRIM22	Q8IYM9	498 aa		10.07	□□□□□ -0.8
HMGN2-208	ENST00000479815	LRRC47	Q8N1G4	583 aa	Known RBP	10.07	□□□□□ -0.8
HMGN2-208	ENST00000479815	SRBD1	Q8N5C6	995 aa	Known RBP	10.07	□□□□□ -0.8
HMGN2-208	ENST00000479815	SPRYD3	Q8NCJ5	442 aa		10.07	□□□□□ -0.8
HMGN2-208	ENST00000479815	WASF1	Q92558	559 aa		10.07	□□□□□ -0.8
HMGN2-208	ENST00000479815	WRNIP1	Q96S55	665 aa		10.07	□□□□□ -0.8
HMGN2-208	ENST00000479815	KIAA1683	Q9H0B3	1180 aa		10.07	□□□□□ -0.8

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