RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 HERC5Q9UII4 1024 aaKnown RBP16.58■□□□□ 0.25
CLDN18-203ENST00000479660 FRMPD2Q68DX3 1309 aaPredicted RBP16.58■□□□□ 0.25
CLDN18-203ENST00000479660 A0A1W2PQ27 194 aa16.58■□□□□ 0.24
CLDN18-203ENST00000479660 A0A1W2PQ64 194 aa16.58■□□□□ 0.24
CLDN18-203ENST00000479660 A0A1W2PQD8 194 aa16.58■□□□□ 0.24
CLDN18-203ENST00000479660 FZD9O00144 591 aa16.58■□□□□ 0.24
CLDN18-203ENST00000479660 PPP6R2O75170 966 aa16.58■□□□□ 0.24
CLDN18-203ENST00000479660 GDF11O95390 407 aa16.58■□□□□ 0.24
CLDN18-203ENST00000479660 CAMK4Q16566 473 aa16.58■□□□□ 0.24
CLDN18-203ENST00000479660 CCDC73Q6ZRK6 1079 aa16.58■□□□□ 0.24
CLDN18-203ENST00000479660 JMYQ8N9B5 988 aa16.58■□□□□ 0.24
CLDN18-203ENST00000479660 FSIP1Q8NA03 581 aa16.58■□□□□ 0.24
CLDN18-203ENST00000479660 UBA5Q9GZZ9 404 aa16.58■□□□□ 0.24
CLDN18-203ENST00000479660 GOLPH3LQ9H4A5 285 aa16.58■□□□□ 0.24
CLDN18-203ENST00000479660 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.58■□□□□ 0.24
CLDN18-203ENST00000479660 VAT1LQ9HCJ6 419 aa16.58■□□□□ 0.24
CLDN18-203ENST00000479660 GREB1LQ9C091 1923 aaPredicted RBP16.58■□□□□ 0.24
CLDN18-203ENST00000479660 CNTNAP1P78357 1384 aa16.58■□□□□ 0.24
CLDN18-203ENST00000479660 EEF2P13639 858 aaKnown RBP16.57■□□□□ 0.24
CLDN18-203ENST00000479660 CALML3P27482 149 aa16.57■□□□□ 0.24
CLDN18-203ENST00000479660 SEPT2Q15019 361 aa16.57■□□□□ 0.24
CLDN18-203ENST00000479660 RBM26Q5T8P6 1007 aaKnown RBP16.57■□□□□ 0.24
CLDN18-203ENST00000479660 HEATR3Q7Z4Q2 680 aa16.57■□□□□ 0.24
CLDN18-203ENST00000479660 MRPS27Q92552 414 aaKnown RBP16.57■□□□□ 0.24
CLDN18-203ENST00000479660 MKL1Q969V6 931 aa16.57■□□□□ 0.24
CLDN18-203ENST00000479660 RRP36Q96EU6 259 aaKnown RBP16.57■□□□□ 0.24
CLDN18-203ENST00000479660 TSPY26PQ9H489 355 aa16.57■□□□□ 0.24
CLDN18-203ENST00000479660 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.57■□□□□ 0.24
CLDN18-203ENST00000479660 NYAP2Q9P242 653 aa16.57■□□□□ 0.24
CLDN18-203ENST00000479660 ATP2B1P20020 1258 aa16.57■□□□□ 0.24
CLDN18-203ENST00000479660 EARS2Q5JPH6 523 aaKnown RBP16.57■□□□□ 0.24
CLDN18-203ENST00000479660 WWC2Q6AWC2 1192 aa16.57■□□□□ 0.24
CLDN18-203ENST00000479660 FAM83AQ86UY5 434 aa16.57■□□□□ 0.24
CLDN18-203ENST00000479660 HOMER1Q86YM7 354 aa16.57■□□□□ 0.24
CLDN18-203ENST00000479660 TMEM39BQ9GZU3 492 aa16.57■□□□□ 0.24
CLDN18-203ENST00000479660 TNMDQ9H2S6 317 aa16.57■□□□□ 0.24
CLDN18-203ENST00000479660 RIOX1Q9H6W3 641 aa16.57■□□□□ 0.24
CLDN18-203ENST00000479660 BARHL2Q9NY43 387 aa16.57■□□□□ 0.24
CLDN18-203ENST00000479660 SEC63Q9UGP8 760 aaKnown RBP16.57■□□□□ 0.24
CLDN18-203ENST00000479660 GJA3Q9Y6H8 435 aa16.57■□□□□ 0.24
CLDN18-203ENST00000479660 ZNF280AP59817 542 aaPredicted RBP16.56■□□□□ 0.24
CLDN18-203ENST00000479660 ICA1Q05084 483 aa16.56■□□□□ 0.24
CLDN18-203ENST00000479660 SNW1Q13573 536 aaKnown RBP16.56■□□□□ 0.24
CLDN18-203ENST00000479660 AXDND1Q5T1B0 1012 aaPredicted RBP16.56■□□□□ 0.24
CLDN18-203ENST00000479660 TYW1BQ6NUM6 668 aa16.56■□□□□ 0.24
CLDN18-203ENST00000479660 CCDC148Q8NFR7 591 aa16.56■□□□□ 0.24
CLDN18-203ENST00000479660 TNFRSF25Q93038 417 aa16.56■□□□□ 0.24
CLDN18-203ENST00000479660 RBSNQ9H1K0 784 aa16.56■□□□□ 0.24
CLDN18-203ENST00000479660 CLSTN2Q9H4D0 955 aa16.56■□□□□ 0.24
CLDN18-203ENST00000479660 GPCPD1Q9NPB8 672 aa16.56■□□□□ 0.24
CLDN18-203ENST00000479660 PCDHB6Q9Y5E3 794 aa16.56■□□□□ 0.24
CLDN18-203ENST00000479660 ARFGEF1Q9Y6D6 1849 aa16.56■□□□□ 0.24
CLDN18-203ENST00000479660 A0A1B0GVL5 298 aa16.55■□□□□ 0.24
CLDN18-203ENST00000479660 FAM205CA6NFA0 338 aa16.55■□□□□ 0.24
CLDN18-203ENST00000479660 GH2P01242 217 aa16.55■□□□□ 0.24
CLDN18-203ENST00000479660 GMPSP49915 693 aaPredicted RBP16.55■□□□□ 0.24
CLDN18-203ENST00000479660 FAM160A1Q05DH4 1040 aa16.55■□□□□ 0.24
CLDN18-203ENST00000479660 ZNF543Q08ER8 600 aa16.55■□□□□ 0.24
CLDN18-203ENST00000479660 MAP3K11Q16584 847 aa16.55■□□□□ 0.24
CLDN18-203ENST00000479660 BLIDQ8IZY5 108 aa16.55■□□□□ 0.24
CLDN18-203ENST00000479660 ENGASEQ8NFI3 743 aa16.55■□□□□ 0.24
CLDN18-203ENST00000479660 DPF2Q92785 391 aa16.55■□□□□ 0.24
CLDN18-203ENST00000479660 PIGSQ96S52 555 aa16.55■□□□□ 0.24
CLDN18-203ENST00000479660 PCDHA4Q9UN74 947 aa16.55■□□□□ 0.24
CLDN18-203ENST00000479660 MYH4Q9Y623 1939 aa16.55■□□□□ 0.24
CLDN18-203ENST00000479660 STXBP3O00186 592 aa16.55■□□□□ 0.24
CLDN18-203ENST00000479660 RAD21O60216 631 aa16.55■□□□□ 0.24
CLDN18-203ENST00000479660 RRP1BQ14684 758 aaKnown RBP16.55■□□□□ 0.24
CLDN18-203ENST00000479660 GPATCH4Q5T3I0 446 aaKnown RBP16.55■□□□□ 0.24
CLDN18-203ENST00000479660 SIAH1Q8IUQ4 282 aa16.55■□□□□ 0.24
CLDN18-203ENST00000479660 MICALL2Q8IY33 904 aa16.55■□□□□ 0.24
CLDN18-203ENST00000479660 NOL7Q9UMY1 257 aaKnown RBP16.55■□□□□ 0.24
CLDN18-203ENST00000479660 CEP131Q9UPN4 1083 aa16.55■□□□□ 0.24
CLDN18-203ENST00000479660 EGFRP00533 1210 aa16.54■□□□□ 0.24
CLDN18-203ENST00000479660 CMA1P23946 247 aa16.54■□□□□ 0.24
CLDN18-203ENST00000479660 JAG1P78504 1218 aa16.54■□□□□ 0.24
CLDN18-203ENST00000479660 CCDC96Q2M329 555 aa16.54■□□□□ 0.24
CLDN18-203ENST00000479660 GALNT17Q6IS24 598 aa16.54■□□□□ 0.24
CLDN18-203ENST00000479660 ARHGAP27Q6ZUM4 889 aa16.54■□□□□ 0.24
CLDN18-203ENST00000479660 FAM177A1Q8N128 213 aaPredicted RBP16.54■□□□□ 0.24
CLDN18-203ENST00000479660 FHDC1Q9C0D6 1143 aaPredicted RBP16.54■□□□□ 0.24
CLDN18-203ENST00000479660 CNOT7Q9UIV1 285 aaKnown RBP16.54■□□□□ 0.24
CLDN18-203ENST00000479660 TRIM75PA6NK02 468 aa16.53■□□□□ 0.24
CLDN18-203ENST00000479660 ADAMTS3O15072 1205 aa16.53■□□□□ 0.24
CLDN18-203ENST00000479660 KINO60870 393 aaKnown RBP16.53■□□□□ 0.24
CLDN18-203ENST00000479660 TNNI2P48788 182 aa16.53■□□□□ 0.24
CLDN18-203ENST00000479660 NDUFA8P51970 172 aa16.53■□□□□ 0.24
CLDN18-203ENST00000479660 NOM1Q5C9Z4 860 aaKnown RBP16.53■□□□□ 0.24
CLDN18-203ENST00000479660 PIK3AP1Q6ZUJ8 805 aa16.53■□□□□ 0.24
CLDN18-203ENST00000479660 KCTD1Q719H9 257 aa16.53■□□□□ 0.24
CLDN18-203ENST00000479660 SAMD7Q7Z3H4 446 aa16.53■□□□□ 0.24
CLDN18-203ENST00000479660 CDAN1Q8IWY9 1227 aa16.53■□□□□ 0.24
CLDN18-203ENST00000479660 CCDC12Q8WUD4 166 aaPredicted RBP16.53■□□□□ 0.24
CLDN18-203ENST00000479660 PANK2Q9BZ23 570 aa16.53■□□□□ 0.24
CLDN18-203ENST00000479660 TBC1D12O60347 775 aa16.53■□□□□ 0.24
CLDN18-203ENST00000479660 SLC1A4P43007 532 aa16.53■□□□□ 0.24
CLDN18-203ENST00000479660 NAPAP54920 295 aa16.53■□□□□ 0.24
CLDN18-203ENST00000479660 SLFN13Q68D06 897 aa16.53■□□□□ 0.24
CLDN18-203ENST00000479660 TTBK2Q6IQ55 1244 aa16.53■□□□□ 0.24
CLDN18-203ENST00000479660 MIGA2Q7L4E1 593 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms