RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 MSL1Q68DK7 614 aa9.79□□□□□ -0.84
GAPVD1-217ENST00000479511 C14orf80Q86SX3 495 aa9.79□□□□□ -0.84
GAPVD1-217ENST00000479511 AHI1Q8N157 1196 aa9.79□□□□□ -0.84
GAPVD1-217ENST00000479511 RNF214Q8ND24 703 aa9.79□□□□□ -0.84
GAPVD1-217ENST00000479511 BTN2A2Q8WVV5 523 aa9.79□□□□□ -0.84
GAPVD1-217ENST00000479511 MTMR8Q96EF0 704 aa9.79□□□□□ -0.84
GAPVD1-217ENST00000479511 FANCD2OSQ96PS1 177 aa9.79□□□□□ -0.84
GAPVD1-217ENST00000479511 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.79□□□□□ -0.84
GAPVD1-217ENST00000479511 SYNGAP1Q96PV0 1343 aa9.79□□□□□ -0.84
GAPVD1-217ENST00000479511 KPNA6O60684 536 aa9.78□□□□□ -0.84
GAPVD1-217ENST00000479511 LILRB5O75023 590 aa9.78□□□□□ -0.84
GAPVD1-217ENST00000479511 ITKQ08881 620 aa9.78□□□□□ -0.84
GAPVD1-217ENST00000479511 DHCR24Q15392 516 aa9.78□□□□□ -0.84
GAPVD1-217ENST00000479511 SF1Q15637 639 aaKnown RBP9.78□□□□□ -0.84
GAPVD1-217ENST00000479511 HP1BP3Q5SSJ5 553 aaPredicted RBP9.78□□□□□ -0.84
GAPVD1-217ENST00000479511 SMC5Q8IY18 1101 aa9.78□□□□□ -0.84
GAPVD1-217ENST00000479511 ADCY4Q8NFM4 1077 aa9.78□□□□□ -0.84
GAPVD1-217ENST00000479511 CYB5D2Q8WUJ1 264 aa9.78□□□□□ -0.84
GAPVD1-217ENST00000479511 ZIM2Q9NZV7 527 aa9.78□□□□□ -0.84
GAPVD1-217ENST00000479511 EMC9Q9Y3B6 208 aa9.78□□□□□ -0.84
GAPVD1-217ENST00000479511 THOC2Q8NI27 1593 aaKnown RBP9.77□□□□□ -0.85
GAPVD1-217ENST00000479511 M0R082 166 aa9.77□□□□□ -0.85
GAPVD1-217ENST00000479511 OPA1O60313 960 aa9.77□□□□□ -0.85
GAPVD1-217ENST00000479511 EPXP11678 715 aa9.77□□□□□ -0.85
GAPVD1-217ENST00000479511 CD247P20963 164 aa9.77□□□□□ -0.85
GAPVD1-217ENST00000479511 GABREP78334 506 aa9.77□□□□□ -0.85
GAPVD1-217ENST00000479511 NTRK3Q16288 839 aa9.77□□□□□ -0.85
GAPVD1-217ENST00000479511 ANKRD39Q53RE8 183 aa9.77□□□□□ -0.85
GAPVD1-217ENST00000479511 SLCO4C1Q6ZQN7 724 aa9.77□□□□□ -0.85
GAPVD1-217ENST00000479511 ILDR2Q71H61 639 aa9.77□□□□□ -0.85
GAPVD1-217ENST00000479511 TRIM59Q8IWR1 403 aa9.77□□□□□ -0.85
GAPVD1-217ENST00000479511 GPR161Q8N6U8 529 aaKnown RBP9.77□□□□□ -0.85
GAPVD1-217ENST00000479511 ZNF417Q8TAU3 575 aa9.77□□□□□ -0.85
GAPVD1-217ENST00000479511 UBASH3BQ8TF42 649 aa9.77□□□□□ -0.85
GAPVD1-217ENST00000479511 PPP1R13LQ8WUF5 828 aa9.77□□□□□ -0.85
GAPVD1-217ENST00000479511 ZNF587Q96SQ5 575 aaPredicted RBP9.77□□□□□ -0.85
GAPVD1-217ENST00000479511 GBP3Q9H0R5 595 aa9.77□□□□□ -0.85
GAPVD1-217ENST00000479511 MBIPQ9NS73 344 aa9.77□□□□□ -0.85
GAPVD1-217ENST00000479511 AKT3Q9Y243 479 aa9.77□□□□□ -0.85
GAPVD1-217ENST00000479511 NPTXRO95502 500 aa9.76□□□□□ -0.85
GAPVD1-217ENST00000479511 CST3P01034 146 aaPredicted RBP9.76□□□□□ -0.85
GAPVD1-217ENST00000479511 ASLP04424 464 aa9.76□□□□□ -0.85
GAPVD1-217ENST00000479511 CD68P34810 354 aaPredicted RBP9.76□□□□□ -0.85
GAPVD1-217ENST00000479511 UBE4AQ14139 1066 aa9.76□□□□□ -0.85
GAPVD1-217ENST00000479511 TTLL4Q14679 1199 aa9.76□□□□□ -0.85
GAPVD1-217ENST00000479511 EXOSC6Q5RKV6 272 aaKnown RBP9.76□□□□□ -0.85
GAPVD1-217ENST00000479511 NBPF12Q5TAG4 269 aaPredicted RBP9.76□□□□□ -0.85
GAPVD1-217ENST00000479511 RNF219Q5W0B1 726 aaPredicted RBP9.76□□□□□ -0.85
GAPVD1-217ENST00000479511 CCSAPQ6IQ19 270 aaPredicted RBP9.76□□□□□ -0.85
GAPVD1-217ENST00000479511 C1orf229Q6ZS94 237 aaPredicted RBP9.76□□□□□ -0.85
GAPVD1-217ENST00000479511 CHPFQ8IZ52 775 aa9.76□□□□□ -0.85
GAPVD1-217ENST00000479511 XAGE3Q8WTP9 111 aa9.76□□□□□ -0.85
GAPVD1-217ENST00000479511 COG1Q8WTW3 980 aa9.76□□□□□ -0.85
GAPVD1-217ENST00000479511 BRF1Q92994 677 aa9.76□□□□□ -0.85
GAPVD1-217ENST00000479511 RPS6KC1Q96S38 1066 aa9.76□□□□□ -0.85
GAPVD1-217ENST00000479511 SPOCK3Q9BQ16 436 aa9.76□□□□□ -0.85
GAPVD1-217ENST00000479511 YIPF4Q9BSR8 244 aa9.76□□□□□ -0.85
GAPVD1-217ENST00000479511 RTFDC1Q9BY42 306 aaPredicted RBP9.76□□□□□ -0.85
GAPVD1-217ENST00000479511 MKRN2Q9H000 416 aaKnown RBP9.76□□□□□ -0.85
GAPVD1-217ENST00000479511 WHRNQ9P202 907 aa9.76□□□□□ -0.85
GAPVD1-217ENST00000479511 BAZ1AQ9NRL2 1556 aaPredicted RBP9.75□□□□□ -0.85
GAPVD1-217ENST00000479511 COL17A1Q9UMD9 1497 aaPredicted RBP9.75□□□□□ -0.85
GAPVD1-217ENST00000479511 NOP56O00567 594 aaKnown RBP9.75□□□□□ -0.85
GAPVD1-217ENST00000479511 DEAF1O75398 565 aaPredicted RBP9.75□□□□□ -0.85
GAPVD1-217ENST00000479511 PPM1BO75688 479 aa9.75□□□□□ -0.85
GAPVD1-217ENST00000479511 JMJD7P0C870 316 aa9.75□□□□□ -0.85
GAPVD1-217ENST00000479511 CAP2P40123 477 aa9.75□□□□□ -0.85
GAPVD1-217ENST00000479511 ID4P47928 161 aa9.75□□□□□ -0.85
GAPVD1-217ENST00000479511 BIRC2Q13490 618 aa9.75□□□□□ -0.85
GAPVD1-217ENST00000479511 GP6Q9HCN6 339 aa9.75□□□□□ -0.85
GAPVD1-217ENST00000479511 NSFL1CQ9UNZ2 370 aaKnown RBP9.75□□□□□ -0.85
GAPVD1-217ENST00000479511 IGF1RP08069 1367 aa9.75□□□□□ -0.85
GAPVD1-217ENST00000479511 DLL1O00548 723 aa9.74□□□□□ -0.85
GAPVD1-217ENST00000479511 NEMP1O14524 444 aa9.74□□□□□ -0.85
GAPVD1-217ENST00000479511 ATF3P18847 181 aa9.74□□□□□ -0.85
GAPVD1-217ENST00000479511 CDC37L1Q7L3B6 337 aa9.74□□□□□ -0.85
GAPVD1-217ENST00000479511 DMRTC2Q8IXT2 367 aaPredicted RBP9.74□□□□□ -0.85
GAPVD1-217ENST00000479511 C7orf61Q8IZ16 206 aa9.74□□□□□ -0.85
GAPVD1-217ENST00000479511 MYO1HQ8N1T3 1032 aa9.74□□□□□ -0.85
GAPVD1-217ENST00000479511 ARHGEF39Q8N4T4 335 aa9.74□□□□□ -0.85
GAPVD1-217ENST00000479511 GOLGA6L1Q8N7Z2 621 aa9.74□□□□□ -0.85
GAPVD1-217ENST00000479511 ISL2Q96A47 359 aa9.74□□□□□ -0.85
GAPVD1-217ENST00000479511 HOOK2Q96ED9 719 aa9.74□□□□□ -0.85
GAPVD1-217ENST00000479511 RCC1LQ96I51 464 aaKnown RBP9.74□□□□□ -0.85
GAPVD1-217ENST00000479511 TMPRSS13Q9BYE2 586 aa9.74□□□□□ -0.85
GAPVD1-217ENST00000479511 TCRBV16S1A1N1A0A5B0 115 aa9.73□□□□□ -0.85
GAPVD1-217ENST00000479511 RBAK-RBAKDNI3L0D1 243 aa9.73□□□□□ -0.85
GAPVD1-217ENST00000479511 EFCAB14O75071 495 aa9.73□□□□□ -0.85
GAPVD1-217ENST00000479511 KCNH1O95259 989 aa9.73□□□□□ -0.85
GAPVD1-217ENST00000479511 IGFALSP35858 605 aa9.73□□□□□ -0.85
GAPVD1-217ENST00000479511 AUHQ13825 339 aaKnown RBP9.73□□□□□ -0.85
GAPVD1-217ENST00000479511 SKOR2Q2VWA4 1001 aaPredicted RBP9.73□□□□□ -0.85
GAPVD1-217ENST00000479511 CDCA2Q69YH5 1023 aaPredicted RBP9.73□□□□□ -0.85
GAPVD1-217ENST00000479511 SPATS2Q86XZ4 545 aaKnown RBP9.73□□□□□ -0.85
GAPVD1-217ENST00000479511 TTC8Q8TAM2 541 aa9.73□□□□□ -0.85
GAPVD1-217ENST00000479511 VWCEQ96DN2 955 aa9.73□□□□□ -0.85
GAPVD1-217ENST00000479511 SLC39A13Q96H72 371 aa9.73□□□□□ -0.85
GAPVD1-217ENST00000479511 CDH19Q9H159 772 aa9.73□□□□□ -0.85
GAPVD1-217ENST00000479511 CGGBP1Q9UFW8 167 aaPredicted RBP9.73□□□□□ -0.85
GAPVD1-217ENST00000479511 TRHDEQ9UKU6 1024 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms