RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 METTL16Q86W50 562 aaKnown RBP9.25□□□□□ -0.93
HMGCL-205ENST00000479458 CHD1LQ86WJ1 897 aa9.25□□□□□ -0.93
HMGCL-205ENST00000479458 SDR42E1Q8WUS8 393 aa9.25□□□□□ -0.93
HMGCL-205ENST00000479458 TIFAQ96CG3 184 aa9.25□□□□□ -0.93
HMGCL-205ENST00000479458 RNPC3Q96LT9 517 aaKnown RBP9.25□□□□□ -0.93
HMGCL-205ENST00000479458 KCNH6Q9H252 994 aa9.25□□□□□ -0.93
HMGCL-205ENST00000479458 DNAJC18Q9H819 358 aa9.25□□□□□ -0.93
HMGCL-205ENST00000479458 ARMT1Q9H993 441 aa9.25□□□□□ -0.93
HMGCL-205ENST00000479458 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.25□□□□□ -0.93
HMGCL-205ENST00000479458 PDLIM7Q9NR12 457 aa9.25□□□□□ -0.93
HMGCL-205ENST00000479458 SAP30BPQ9UHR5 308 aaKnown RBP9.25□□□□□ -0.93
HMGCL-205ENST00000479458 HERC5Q9UII4 1024 aaKnown RBP9.25□□□□□ -0.93
HMGCL-205ENST00000479458 HLA-DOAP06340 250 aa9.24□□□□□ -0.93
HMGCL-205ENST00000479458 MAPK4P31152 587 aa9.24□□□□□ -0.93
HMGCL-205ENST00000479458 RGS2P41220 211 aa9.24□□□□□ -0.93
HMGCL-205ENST00000479458 MRE11P49959 708 aa9.24□□□□□ -0.93
HMGCL-205ENST00000479458 RRP1BQ14684 758 aaKnown RBP9.24□□□□□ -0.93
HMGCL-205ENST00000479458 SH3D19Q5HYK7 790 aa9.24□□□□□ -0.93
HMGCL-205ENST00000479458 MORN1Q5T089 497 aa9.24□□□□□ -0.93
HMGCL-205ENST00000479458 TREML2Q5T2D2 321 aa9.24□□□□□ -0.93
HMGCL-205ENST00000479458 FOXP4Q8IVH2 680 aaPredicted RBP9.24□□□□□ -0.93
HMGCL-205ENST00000479458 APPBP2Q92624 585 aa9.24□□□□□ -0.93
HMGCL-205ENST00000479458 APBA2Q99767 749 aa9.24□□□□□ -0.93
HMGCL-205ENST00000479458 PUS7LQ9H0K6 701 aaKnown RBP9.24□□□□□ -0.93
HMGCL-205ENST00000479458 EPHX3Q9H6B9 360 aa9.24□□□□□ -0.93
HMGCL-205ENST00000479458 DCP1AQ9NPI6 582 aaPredicted RBP9.24□□□□□ -0.93
HMGCL-205ENST00000479458 DDX20Q9UHI6 824 aaKnown RBP9.24□□□□□ -0.93
HMGCL-205ENST00000479458 TACC3Q9Y6A5 838 aa9.24□□□□□ -0.93
HMGCL-205ENST00000479458 ATAD5Q96QE3 1844 aa9.24□□□□□ -0.93
HMGCL-205ENST00000479458 CHD7Q9P2D1 2997 aa9.24□□□□□ -0.93
HMGCL-205ENST00000479458 PLXNA1Q9UIW2 1896 aa9.23□□□□□ -0.93
HMGCL-205ENST00000479458 CHD9Q3L8U1 2897 aa9.23□□□□□ -0.93
HMGCL-205ENST00000479458 REV3LO60673 3130 aa9.23□□□□□ -0.93
HMGCL-205ENST00000479458 BAZ2AQ9UIF9 1905 aaKnown RBP9.23□□□□□ -0.93
HMGCL-205ENST00000479458 RNF113AO15541 343 aaKnown RBP9.23□□□□□ -0.93
HMGCL-205ENST00000479458 PRKAB2O43741 272 aa9.23□□□□□ -0.93
HMGCL-205ENST00000479458 IGHA2P01877 340 aa9.23□□□□□ -0.93
HMGCL-205ENST00000479458 ZFYP08048 801 aaPredicted RBP9.23□□□□□ -0.93
HMGCL-205ENST00000479458 HOXA7P31268 230 aaPredicted RBP9.23□□□□□ -0.93
HMGCL-205ENST00000479458 CAP2P40123 477 aa9.23□□□□□ -0.93
HMGCL-205ENST00000479458 FOXK2Q01167 660 aa9.23□□□□□ -0.93
HMGCL-205ENST00000479458 LRRFIP1Q32MZ4 808 aaKnown RBP9.23□□□□□ -0.93
HMGCL-205ENST00000479458 TTC6Q86TZ1 520 aa9.23□□□□□ -0.93
HMGCL-205ENST00000479458 PLEKHM2Q8IWE5 1019 aa9.23□□□□□ -0.93
HMGCL-205ENST00000479458 CRACR2BQ8N4Y2 399 aaPredicted RBP9.23□□□□□ -0.93
HMGCL-205ENST00000479458 ARRDC4Q8NCT1 418 aa9.23□□□□□ -0.93
HMGCL-205ENST00000479458 OSBP2Q969R2 916 aa9.23□□□□□ -0.93
HMGCL-205ENST00000479458 DCBLD2Q96PD2 775 aa9.23□□□□□ -0.93
HMGCL-205ENST00000479458 FSD1Q9BTV5 496 aa9.23□□□□□ -0.93
HMGCL-205ENST00000479458 ASCC2Q9H1I8 757 aaPredicted RBP9.23□□□□□ -0.93
HMGCL-205ENST00000479458 EHD4Q9H223 541 aa9.23□□□□□ -0.93
HMGCL-205ENST00000479458 C11orf16Q9NQ32 467 aa9.23□□□□□ -0.93
HMGCL-205ENST00000479458 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.23□□□□□ -0.93
HMGCL-205ENST00000479458 TRIM43BA6NCK2 446 aa9.22□□□□□ -0.93
HMGCL-205ENST00000479458 TRIM75PA6NK02 468 aa9.22□□□□□ -0.93
HMGCL-205ENST00000479458 KIAA0355O15063 1070 aa9.22□□□□□ -0.93
HMGCL-205ENST00000479458 GPAA1O43292 621 aa9.22□□□□□ -0.93
HMGCL-205ENST00000479458 POLR3DP05423 398 aaPredicted RBP9.22□□□□□ -0.93
HMGCL-205ENST00000479458 HOXC6P09630 235 aa9.22□□□□□ -0.93
HMGCL-205ENST00000479458 PLCD1P51178 756 aa9.22□□□□□ -0.93
HMGCL-205ENST00000479458 GABPAQ06546 454 aa9.22□□□□□ -0.93
HMGCL-205ENST00000479458 CCDC84Q86UT8 332 aaPredicted RBP9.22□□□□□ -0.93
HMGCL-205ENST00000479458 EFCAB3Q8N7B9 438 aa9.22□□□□□ -0.93
HMGCL-205ENST00000479458 GPRC5AQ8NFJ5 357 aa9.22□□□□□ -0.93
HMGCL-205ENST00000479458 GTF3C2Q8WUA4 911 aaPredicted RBP9.22□□□□□ -0.93
HMGCL-205ENST00000479458 TRIM43Q96BQ3 446 aaPredicted RBP9.22□□□□□ -0.93
HMGCL-205ENST00000479458 EVI5LQ96CN4 794 aa9.22□□□□□ -0.93
HMGCL-205ENST00000479458 STRBPQ96SI9 672 aaKnown RBP9.22□□□□□ -0.93
HMGCL-205ENST00000479458 OSBPL3Q9H4L5 887 aa9.22□□□□□ -0.93
HMGCL-205ENST00000479458 ATP8A2Q9NTI2 1148 aa9.22□□□□□ -0.93
HMGCL-205ENST00000479458 MCM9Q9NXL9 1143 aa9.22□□□□□ -0.93
HMGCL-205ENST00000479458 SERPINB13Q9UIV8 391 aa9.22□□□□□ -0.93
HMGCL-205ENST00000479458 ATP11BQ9Y2G3 1177 aa9.22□□□□□ -0.93
HMGCL-205ENST00000479458 PRR33A8MZF0 331 aa9.21□□□□□ -0.94
HMGCL-205ENST00000479458 PI4K2BG5E9Z4 385 aa9.21□□□□□ -0.94
HMGCL-205ENST00000479458 M0R2C6 588 aa9.21□□□□□ -0.94
HMGCL-205ENST00000479458 ASNSP08243 561 aa9.21□□□□□ -0.94
HMGCL-205ENST00000479458 CYP2D6P10635 497 aa9.21□□□□□ -0.94
HMGCL-205ENST00000479458 PDE4AP27815 886 aa9.21□□□□□ -0.94
HMGCL-205ENST00000479458 JAG1P78504 1218 aa9.21□□□□□ -0.94
HMGCL-205ENST00000479458 ADGRE1Q14246 886 aa9.21□□□□□ -0.94
HMGCL-205ENST00000479458 SHROOM1Q2M3G4 852 aaPredicted RBP9.21□□□□□ -0.94
HMGCL-205ENST00000479458 ZMYM1Q5SVZ6 1142 aa9.21□□□□□ -0.94
HMGCL-205ENST00000479458 RASIP1Q5U651 963 aa9.21□□□□□ -0.94
HMGCL-205ENST00000479458 MFSD14CQ5VZR4 134 aa9.21□□□□□ -0.94
HMGCL-205ENST00000479458 TATDN1Q6P1N9 297 aa9.21□□□□□ -0.94
HMGCL-205ENST00000479458 ZNF280CQ8ND82 737 aa9.21□□□□□ -0.94
HMGCL-205ENST00000479458 NECAB3Q96P71 396 aaPredicted RBP9.21□□□□□ -0.94
HMGCL-205ENST00000479458 SEC62Q99442 399 aaKnown RBP9.21□□□□□ -0.94
HMGCL-205ENST00000479458 TRIM34Q9BYJ4 488 aa9.21□□□□□ -0.94
HMGCL-205ENST00000479458 GINM1Q9NU53 330 aa9.21□□□□□ -0.94
HMGCL-205ENST00000479458 ZBTB21Q9ULJ3 1066 aa9.21□□□□□ -0.94
HMGCL-205ENST00000479458 SLC4A4Q9Y6R1 1079 aa9.21□□□□□ -0.94
HMGCL-205ENST00000479458 ZDBF2Q9HCK1 2354 aa9.2□□□□□ -0.94
HMGCL-205ENST00000479458 CYP2D7A0A087X1C5 515 aa9.2□□□□□ -0.94
HMGCL-205ENST00000479458 GSG1L2A8MUP6 293 aa9.2□□□□□ -0.94
HMGCL-205ENST00000479458 USP17L12C9JPN9 530 aa9.2□□□□□ -0.94
HMGCL-205ENST00000479458 USP17L21D6R901 530 aa9.2□□□□□ -0.94
HMGCL-205ENST00000479458 SMIM22K7EJ46 135 aa9.2□□□□□ -0.94
HMGCL-205ENST00000479458 GDF11O95390 407 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms