RNA–Protein interactions for RNA: ENST00000479169.5

HDLBP-237, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 1,017 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-237ENST00000479169 TTYH1Q9H313 450 aaPredicted RBP13.32□□□□□ -0.28
HDLBP-237ENST00000479169 SEMA6BQ9H3T3 888 aa13.32□□□□□ -0.28
HDLBP-237ENST00000479169 MROH8Q9H579 483 aa13.32□□□□□ -0.28
HDLBP-237ENST00000479169 VCPKMTQ9H867 229 aa13.32□□□□□ -0.28
HDLBP-237ENST00000479169 FBXO28Q9NVF7 368 aa13.32□□□□□ -0.28
HDLBP-237ENST00000479169 PGK2P07205 417 aa13.31□□□□□ -0.28
HDLBP-237ENST00000479169 FCER1AP12319 257 aa13.31□□□□□ -0.28
HDLBP-237ENST00000479169 TAL1P17542 331 aaPredicted RBP13.31□□□□□ -0.28
HDLBP-237ENST00000479169 TMEM132BQ14DG7 1078 aa13.31□□□□□ -0.28
HDLBP-237ENST00000479169 ABRAQ8N0Z2 381 aa13.31□□□□□ -0.28
HDLBP-237ENST00000479169 PANK1Q8TE04 598 aa13.31□□□□□ -0.28
HDLBP-237ENST00000479169 LENG1Q96BZ8 264 aaPredicted RBP13.31□□□□□ -0.28
HDLBP-237ENST00000479169 ARHGEF10LQ9HCE6 1279 aa13.31□□□□□ -0.28
HDLBP-237ENST00000479169 SLC5A4Q9NY91 659 aa13.31□□□□□ -0.28
HDLBP-237ENST00000479169 SWAP70Q9UH65 585 aa13.31□□□□□ -0.28
HDLBP-237ENST00000479169 TMX2Q9Y320 296 aa13.31□□□□□ -0.28
HDLBP-237ENST00000479169 WDR46O15213 610 aaKnown RBP13.3□□□□□ -0.28
HDLBP-237ENST00000479169 MBD4O95243 580 aa13.3□□□□□ -0.28
HDLBP-237ENST00000479169 PGK1P00558 417 aa13.3□□□□□ -0.28
HDLBP-237ENST00000479169 CHGBP05060 677 aa13.3□□□□□ -0.28
HDLBP-237ENST00000479169 EPHB4P54760 987 aa13.3□□□□□ -0.28
HDLBP-237ENST00000479169 SMAD3P84022 425 aaKnown RBP13.3□□□□□ -0.28
HDLBP-237ENST00000479169 MMP19Q99542 508 aa13.3□□□□□ -0.28
HDLBP-237ENST00000479169 XPNPEP3Q9NQH7 507 aa13.3□□□□□ -0.28
HDLBP-237ENST00000479169 PHF24Q9UPV7 400 aa13.3□□□□□ -0.28
HDLBP-237ENST00000479169 GREB1LQ9C091 1923 aaPredicted RBP13.29□□□□□ -0.28
HDLBP-237ENST00000479169 MYH4Q9Y623 1939 aa13.29□□□□□ -0.28
HDLBP-237ENST00000479169 RARBP10826 455 aa13.29□□□□□ -0.28
HDLBP-237ENST00000479169 CDK8P49336 464 aa13.29□□□□□ -0.28
HDLBP-237ENST00000479169 C1orf53Q5VUE5 145 aa13.29□□□□□ -0.28
HDLBP-237ENST00000479169 SH2D4AQ9H788 454 aa13.29□□□□□ -0.28
HDLBP-237ENST00000479169 MUC3AQ02505 3323 aa13.28□□□□□ -0.28
HDLBP-237ENST00000479169 A0A1W2PQ45 241 aaPredicted RBP13.28□□□□□ -0.28
HDLBP-237ENST00000479169 A0A1W2PQY0 241 aa13.28□□□□□ -0.28
HDLBP-237ENST00000479169 PQBP1O60828 265 aaKnown RBP13.28□□□□□ -0.28
HDLBP-237ENST00000479169 SLC25A27O95847 323 aa13.28□□□□□ -0.28
HDLBP-237ENST00000479169 CLTBP09497 229 aa13.28□□□□□ -0.28
HDLBP-237ENST00000479169 IFIT2P09913 472 aaKnown RBP13.28□□□□□ -0.28
HDLBP-237ENST00000479169 EEF2P13639 858 aaKnown RBP13.28□□□□□ -0.28
HDLBP-237ENST00000479169 ADD2P35612 726 aa13.28□□□□□ -0.28
HDLBP-237ENST00000479169 ZNF792Q3KQV3 632 aa13.28□□□□□ -0.28
HDLBP-237ENST00000479169 HSP90AB4PQ58FF6 505 aa13.28□□□□□ -0.28
HDLBP-237ENST00000479169 C12orf60Q5U649 245 aa13.28□□□□□ -0.28
HDLBP-237ENST00000479169 RIOX2Q8IUF8 465 aa13.28□□□□□ -0.28
HDLBP-237ENST00000479169 CLASRPQ8N2M8 674 aaKnown RBP13.28□□□□□ -0.28
HDLBP-237ENST00000479169 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.28□□□□□ -0.28
HDLBP-237ENST00000479169 KIF1BPQ96EK5 621 aa13.28□□□□□ -0.28
HDLBP-237ENST00000479169 RNPC3Q96LT9 517 aaKnown RBP13.28□□□□□ -0.28
HDLBP-237ENST00000479169 TINF2Q9BSI4 451 aa13.28□□□□□ -0.28
HDLBP-237ENST00000479169 BOLA2Q9H3K6 86 aa13.28□□□□□ -0.28
HDLBP-237ENST00000479169 ADAMTS5Q9UNA0 930 aa13.28□□□□□ -0.28
HDLBP-237ENST00000479169 USP17L12C9JPN9 530 aa13.27□□□□□ -0.29
HDLBP-237ENST00000479169 USP17L21D6R901 530 aa13.27□□□□□ -0.29
HDLBP-237ENST00000479169 RAD21O60216 631 aa13.27□□□□□ -0.29
HDLBP-237ENST00000479169 ZNF865P0CJ78 1059 aaPredicted RBP13.27□□□□□ -0.29
HDLBP-237ENST00000479169 FOSL2P15408 326 aa13.27□□□□□ -0.29
HDLBP-237ENST00000479169 HNRNPUQ00839 825 aaKnown RBP eCLIP13.27□□□□□ -0.29
HDLBP-237ENST00000479169 FAM83BQ5T0W9 1011 aa13.27□□□□□ -0.29
HDLBP-237ENST00000479169 C16orf86Q6ZW13 317 aa13.27□□□□□ -0.29
HDLBP-237ENST00000479169 RNF180Q86T96 592 aa13.27□□□□□ -0.29
HDLBP-237ENST00000479169 CCDC17Q96LX7 622 aa13.27□□□□□ -0.29
HDLBP-237ENST00000479169 ATP8A2Q9NTI2 1148 aa13.27□□□□□ -0.29
HDLBP-237ENST00000479169 PAG1Q9NWQ8 432 aa13.27□□□□□ -0.29
HDLBP-237ENST00000479169 ZNF214Q9UL59 606 aaPredicted RBP13.27□□□□□ -0.29
HDLBP-237ENST00000479169 TACC3Q9Y6A5 838 aa13.27□□□□□ -0.29
HDLBP-237ENST00000479169 VWA5AO00534 786 aa13.26□□□□□ -0.29
HDLBP-237ENST00000479169 KIAA0355O15063 1070 aa13.26□□□□□ -0.29
HDLBP-237ENST00000479169 RAG1P15918 1043 aa13.26□□□□□ -0.29
HDLBP-237ENST00000479169 STAT3P40763 770 aa13.26□□□□□ -0.29
HDLBP-237ENST00000479169 KCTD2Q14681 263 aa13.26□□□□□ -0.29
HDLBP-237ENST00000479169 SIRT2Q8IXJ6 389 aa13.26□□□□□ -0.29
HDLBP-237ENST00000479169 REPS2Q8NFH8 660 aa13.26□□□□□ -0.29
HDLBP-237ENST00000479169 ROBO3Q96MS0 1386 aa13.26□□□□□ -0.29
HDLBP-237ENST00000479169 NUP88Q99567 741 aaPredicted RBP13.26□□□□□ -0.29
HDLBP-237ENST00000479169 NRBP1Q9UHY1 535 aa13.26□□□□□ -0.29
HDLBP-237ENST00000479169 PPP1R9AQ9ULJ8 1098 aa13.26□□□□□ -0.29
HDLBP-237ENST00000479169 SYNRGQ9UMZ2 1314 aa13.25□□□□□ -0.29
HDLBP-237ENST00000479169 ADAMTS4O75173 837 aa13.25□□□□□ -0.29
HDLBP-237ENST00000479169 AKR1A1P14550 325 aa13.25□□□□□ -0.29
HDLBP-237ENST00000479169 IRX5P78411 483 aaPredicted RBP13.25□□□□□ -0.29
HDLBP-237ENST00000479169 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.25□□□□□ -0.29
HDLBP-237ENST00000479169 KANSL2Q9H9L4 492 aa13.25□□□□□ -0.29
HDLBP-237ENST00000479169 GOPCQ9HD26 462 aa13.25□□□□□ -0.29
HDLBP-237ENST00000479169 TMEM39AQ9NV64 488 aa13.25□□□□□ -0.29
HDLBP-237ENST00000479169 DIS3Q9Y2L1 958 aaKnown RBP13.25□□□□□ -0.29
HDLBP-237ENST00000479169 CHD9Q3L8U1 2897 aa13.24□□□□□ -0.29
HDLBP-237ENST00000479169 ZBED9Q6R2W3 1325 aa13.24□□□□□ -0.29
HDLBP-237ENST00000479169 MYADML2A6NDP7 307 aa13.24□□□□□ -0.29
HDLBP-237ENST00000479169 FPGSQ05932 587 aa13.24□□□□□ -0.29
HDLBP-237ENST00000479169 FAAP100Q0VG06 881 aa13.24□□□□□ -0.29
HDLBP-237ENST00000479169 GRIN2CQ14957 1233 aa13.24□□□□□ -0.29
HDLBP-237ENST00000479169 CTR9Q6PD62 1173 aa13.24□□□□□ -0.29
HDLBP-237ENST00000479169 AMOTL1Q8IY63 956 aa13.24□□□□□ -0.29
HDLBP-237ENST00000479169 STK11IPQ8N1F8 1099 aa13.24□□□□□ -0.29
HDLBP-237ENST00000479169 USP38Q8NB14 1042 aa13.24□□□□□ -0.29
HDLBP-237ENST00000479169 HAUS7Q99871 368 aa13.24□□□□□ -0.29
HDLBP-237ENST00000479169 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.24□□□□□ -0.292e-6■□□□□ 8.2
HDLBP-237ENST00000479169 RIPK3Q9Y572 518 aa13.24□□□□□ -0.29
HDLBP-237ENST00000479169 SLC4A4Q9Y6R1 1079 aa13.24□□□□□ -0.29
HDLBP-237ENST00000479169 GBF1Q92538 1859 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms