RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 TRIML1Q8N9V2 468 aa23.7■■□□□ 1.38
SDF4-206ENST00000478938 EHBP1Q8NDI1 1231 aa23.7■■□□□ 1.38
SDF4-206ENST00000478938 LACRTQ9GZZ8 138 aa23.7■■□□□ 1.38
SDF4-206ENST00000478938 ANP32DO95626 131 aa23.7■■□□□ 1.38
SDF4-206ENST00000478938 CASP1P29466 404 aa23.7■■□□□ 1.38
SDF4-206ENST00000478938 SLC5A9Q2M3M2 681 aa23.7■■□□□ 1.38
SDF4-206ENST00000478938 TBC1D25Q3MII6 688 aa23.7■■□□□ 1.38
SDF4-206ENST00000478938 KRT40Q6A162 431 aa23.7■■□□□ 1.38
SDF4-206ENST00000478938 ALG1Q9BT22 464 aa23.7■■□□□ 1.38
SDF4-206ENST00000478938 DUSP10Q9Y6W6 482 aa23.7■■□□□ 1.38
SDF4-206ENST00000478938 FAM153BP0C7A2 387 aa23.69■■□□□ 1.38
SDF4-206ENST00000478938 CUL4BQ13620 913 aa23.69■■□□□ 1.38
SDF4-206ENST00000478938 KRT31Q15323 416 aa23.69■■□□□ 1.38
SDF4-206ENST00000478938 FAM153CQ494X1 144 aa23.69■■□□□ 1.38
SDF4-206ENST00000478938 CREG2Q8IUH2 290 aa23.69■■□□□ 1.38
SDF4-206ENST00000478938 IQCKQ8N0W5 287 aa23.69■■□□□ 1.38
SDF4-206ENST00000478938 CCDC47Q96A33 483 aaKnown RBP23.69■■□□□ 1.38
SDF4-206ENST00000478938 HVCN1Q96D96 273 aa23.69■■□□□ 1.38
SDF4-206ENST00000478938 EYA1Q99502 592 aa23.69■■□□□ 1.38
SDF4-206ENST00000478938 FAM153AQ9UHL3 310 aa23.69■■□□□ 1.38
SDF4-206ENST00000478938 ITGB3BPQ13352 177 aaPredicted RBP23.69■■□□□ 1.38
SDF4-206ENST00000478938 BYSLQ13895 437 aaKnown RBP23.69■■□□□ 1.38
SDF4-206ENST00000478938 EMC10Q5UCC4 262 aa23.69■■□□□ 1.38
SDF4-206ENST00000478938 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.69■■□□□ 1.38
SDF4-206ENST00000478938 TAB2Q9NYJ8 693 aa23.69■■□□□ 1.38
SDF4-206ENST00000478938 EHD2Q9NZN4 543 aa23.69■■□□□ 1.38
SDF4-206ENST00000478938 STIM2Q9P246 746 aa23.69■■□□□ 1.38
SDF4-206ENST00000478938 SPATA31D1Q6ZQQ2 1576 aa23.69■■□□□ 1.38
SDF4-206ENST00000478938 MACROD2A1Z1Q3 448 aa23.68■■□□□ 1.38
SDF4-206ENST00000478938 TTC36A6NLP5 189 aa23.68■■□□□ 1.38
SDF4-206ENST00000478938 HAUS3Q68CZ6 603 aa23.68■■□□□ 1.38
SDF4-206ENST00000478938 ACSBG1Q96GR2 724 aa23.68■■□□□ 1.38
SDF4-206ENST00000478938 SEC16BQ96JE7 1060 aa23.68■■□□□ 1.38
SDF4-206ENST00000478938 ATP6V1G3Q96LB4 118 aa23.68■■□□□ 1.38
SDF4-206ENST00000478938 PPP1R7Q15435 360 aa23.68■■□□□ 1.38
SDF4-206ENST00000478938 ELOA2Q8IYF1 753 aaPredicted RBP23.68■■□□□ 1.38
SDF4-206ENST00000478938 SPATA4Q8NEY3 305 aa23.67■■□□□ 1.38
SDF4-206ENST00000478938 PIK3R5Q8WYR1 880 aa23.67■■□□□ 1.38
SDF4-206ENST00000478938 PALLDQ8WX93 1383 aa23.67■■□□□ 1.38
SDF4-206ENST00000478938 GMNCA6NCL1 334 aa23.67■■□□□ 1.38
SDF4-206ENST00000478938 HSPD1P10809 573 aaKnown RBP23.67■■□□□ 1.38
SDF4-206ENST00000478938 HAND2P61296 217 aa23.67■■□□□ 1.38
SDF4-206ENST00000478938 DSCC1Q9BVC3 393 aa23.67■■□□□ 1.38
SDF4-206ENST00000478938 SH3TC1Q8TE82 1336 aa23.67■■□□□ 1.38
SDF4-206ENST00000478938 ACTN4O43707 911 aaKnown RBP23.66■■□□□ 1.38
SDF4-206ENST00000478938 PYGLP06737 847 aa23.66■■□□□ 1.38
SDF4-206ENST00000478938 PRPHP41219 470 aa23.66■■□□□ 1.38
SDF4-206ENST00000478938 PSMB7Q99436 277 aa23.66■■□□□ 1.38
SDF4-206ENST00000478938 DNAJC8O75937 253 aaPredicted RBP23.66■■□□□ 1.38
SDF4-206ENST00000478938 UPP2O95045 317 aa23.66■■□□□ 1.38
SDF4-206ENST00000478938 LACTB2Q53H82 288 aaPredicted RBP23.66■■□□□ 1.38
SDF4-206ENST00000478938 USP49Q70CQ1 688 aa23.66■■□□□ 1.38
SDF4-206ENST00000478938 TCP11Q8WWU5 503 aa23.66■■□□□ 1.38
SDF4-206ENST00000478938 CCDC61Q9Y6R9 512 aa23.66■■□□□ 1.38
SDF4-206ENST00000478938 KDRP35968 1356 aa23.65■■□□□ 1.38
SDF4-206ENST00000478938 PRC1O43663 620 aa23.65■■□□□ 1.38
SDF4-206ENST00000478938 DPYDQ12882 1025 aa23.65■■□□□ 1.38
SDF4-206ENST00000478938 CORO1CQ9ULV4 474 aaPredicted RBP23.65■■□□□ 1.38
SDF4-206ENST00000478938 NFU1Q9UMS0 254 aa23.65■■□□□ 1.38
SDF4-206ENST00000478938 ESYT3A0FGR9 886 aa23.65■■□□□ 1.38
SDF4-206ENST00000478938 EIF4E1BA6NMX2 242 aaKnown RBP23.65■■□□□ 1.38
SDF4-206ENST00000478938 KRT86O43790 486 aa23.65■■□□□ 1.38
SDF4-206ENST00000478938 AFMP43652 599 aa23.65■■□□□ 1.38
SDF4-206ENST00000478938 GUCY2FP51841 1108 aa23.65■■□□□ 1.38
SDF4-206ENST00000478938 PDCD2Q16342 344 aaPredicted RBP23.65■■□□□ 1.38
SDF4-206ENST00000478938 CTNND2Q9UQB3 1225 aa23.65■■□□□ 1.38
SDF4-206ENST00000478938 TTC26A0AVF1 554 aa23.64■■□□□ 1.38
SDF4-206ENST00000478938 LINGO3P0C6S8 592 aa23.64■■□□□ 1.38
SDF4-206ENST00000478938 PPP4R3AQ6IN85 833 aa23.64■■□□□ 1.38
SDF4-206ENST00000478938 CACNA2D3Q8IZS8 1091 aa23.64■■□□□ 1.38
SDF4-206ENST00000478938 TRIM58Q8NG06 486 aa23.64■■□□□ 1.38
SDF4-206ENST00000478938 SMCR8Q8TEV9 937 aaPredicted RBP23.64■■□□□ 1.38
SDF4-206ENST00000478938 DBNDD2Q9BQY9 259 aa23.64■■□□□ 1.38
SDF4-206ENST00000478938 ANO9A1A5B4 782 aa23.64■■□□□ 1.37
SDF4-206ENST00000478938 ERICH2A1L162 156 aa23.64■■□□□ 1.37
SDF4-206ENST00000478938 CLTAP09496 248 aa23.64■■□□□ 1.37
SDF4-206ENST00000478938 CARSP49589 748 aaKnown RBP23.64■■□□□ 1.37
SDF4-206ENST00000478938 SPATA20Q8TB22 786 aa23.64■■□□□ 1.37
SDF4-206ENST00000478938 RUBCNQ92622 972 aa23.64■■□□□ 1.37
SDF4-206ENST00000478938 SNX12Q9UMY4 172 aa23.64■■□□□ 1.37
SDF4-206ENST00000478938 RFX7Q2KHR2 1363 aa23.64■■□□□ 1.37
SDF4-206ENST00000478938 ZSCAN5CA6NGD5 496 aaPredicted RBP23.63■■□□□ 1.37
SDF4-206ENST00000478938 KIF4AO95239 1232 aa23.63■■□□□ 1.37
SDF4-206ENST00000478938 RXRAP19793 462 aa23.63■■□□□ 1.37
SDF4-206ENST00000478938 CXCR5P32302 372 aa23.63■■□□□ 1.37
SDF4-206ENST00000478938 GLE1Q53GS7 698 aaKnown RBP23.63■■□□□ 1.37
SDF4-206ENST00000478938 PNMA8AQ86V59 439 aaPredicted RBP23.63■■□□□ 1.37
SDF4-206ENST00000478938 DRAXINQ8NBI3 349 aaPredicted RBP23.63■■□□□ 1.37
SDF4-206ENST00000478938 CCT6BQ92526 530 aa23.63■■□□□ 1.37
SDF4-206ENST00000478938 PHKBQ93100 1093 aa23.63■■□□□ 1.37
SDF4-206ENST00000478938 GRM8O00222 908 aa23.63■■□□□ 1.37
SDF4-206ENST00000478938 KCNQ3O43525 872 aa23.63■■□□□ 1.37
SDF4-206ENST00000478938 MYBL1P10243 752 aa23.63■■□□□ 1.37
SDF4-206ENST00000478938 TMOD1P28289 359 aa23.63■■□□□ 1.37
SDF4-206ENST00000478938 COPB1P53618 953 aaKnown RBP23.63■■□□□ 1.37
SDF4-206ENST00000478938 FBXO2Q9UK22 296 aaPredicted RBP23.63■■□□□ 1.37
SDF4-206ENST00000478938 SRRM3A6NNA2 597 aaPredicted RBP23.62■■□□□ 1.37
SDF4-206ENST00000478938 TRAPPC3O43617 180 aa23.62■■□□□ 1.37
SDF4-206ENST00000478938 TFCP2Q12800 502 aa23.62■■□□□ 1.37
SDF4-206ENST00000478938 TNNI3KQ59H18 835 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms