RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 PFASO15067 1338 aa27.28■■□□□ 1.96
C9orf3-216ENST00000478603 PATL2C9JE40 543 aaKnown RBP27.28■■□□□ 1.96
C9orf3-216ENST00000478603 STRNO43815 780 aa27.28■■□□□ 1.96
C9orf3-216ENST00000478603 PRDM1O75626 825 aa27.28■■□□□ 1.96
C9orf3-216ENST00000478603 TMEM132BQ14DG7 1078 aa27.28■■□□□ 1.96
C9orf3-216ENST00000478603 FAM83BQ5T0W9 1011 aa27.28■■□□□ 1.96
C9orf3-216ENST00000478603 ANKRD45Q5TZF3 282 aa27.28■■□□□ 1.96
C9orf3-216ENST00000478603 IFNL3Q8IZI9 196 aa27.28■■□□□ 1.96
C9orf3-216ENST00000478603 SALL3Q9BXA9 1300 aa27.27■■□□□ 1.96
C9orf3-216ENST00000478603 COBLO75128 1261 aa27.27■■□□□ 1.96
C9orf3-216ENST00000478603 PRO3102Q9H379 93 aa27.27■■□□□ 1.96
C9orf3-216ENST00000478603 CNGA1P29973 690 aa27.26■■□□□ 1.95
C9orf3-216ENST00000478603 ZMYM1Q5SVZ6 1142 aa27.26■■□□□ 1.95
C9orf3-216ENST00000478603 TRPV1Q8NER1 839 aa27.26■■□□□ 1.95
C9orf3-216ENST00000478603 NUP88Q99567 741 aaPredicted RBP27.26■■□□□ 1.95
C9orf3-216ENST00000478603 MROH8Q9H579 483 aa27.26■■□□□ 1.95
C9orf3-216ENST00000478603 PCDH10Q9P2E7 1040 aa27.26■■□□□ 1.95
C9orf3-216ENST00000478603 ADAMTS5Q9UNA0 930 aa27.26■■□□□ 1.95
C9orf3-216ENST00000478603 IGHA2P01877 340 aa27.25■■□□□ 1.95
C9orf3-216ENST00000478603 NYAP2Q9P242 653 aa27.25■■□□□ 1.95
C9orf3-216ENST00000478603 ZBTB47Q9UFB7 747 aaPredicted RBP27.25■■□□□ 1.95
C9orf3-216ENST00000478603 PPP1R9AQ9ULJ8 1098 aa27.25■■□□□ 1.95
C9orf3-216ENST00000478603 ZMYND8Q9ULU4 1186 aaPredicted RBP27.25■■□□□ 1.95
C9orf3-216ENST00000478603 RANBP2P49792 3224 aaKnown RBP27.25■■□□□ 1.95
C9orf3-216ENST00000478603 ZNF444Q8N0Y2 327 aaPredicted RBP27.24■■□□□ 1.95
C9orf3-216ENST00000478603 STAP2Q9UGK3 403 aa27.24■■□□□ 1.95
C9orf3-216ENST00000478603 DDX20Q9UHI6 824 aaKnown RBP27.24■■□□□ 1.95
C9orf3-216ENST00000478603 IGKV6D-41A0A0C4DH26 115 aa27.23■■□□□ 1.95
C9orf3-216ENST00000478603 VWA5AO00534 786 aa27.23■■□□□ 1.95
C9orf3-216ENST00000478603 COL6A1P12109 1028 aa27.23■■□□□ 1.95
C9orf3-216ENST00000478603 CYBAP13498 195 aa27.23■■□□□ 1.95
C9orf3-216ENST00000478603 OLFML2BQ68BL8 750 aa27.23■■□□□ 1.95
C9orf3-216ENST00000478603 CCDC129Q6ZRS4 1044 aa27.23■■□□□ 1.95
C9orf3-216ENST00000478603 NACAP1Q9BZK3 213 aa27.23■■□□□ 1.95
C9orf3-216ENST00000478603 CLIP2Q9UDT6 1046 aa27.23■■□□□ 1.95
C9orf3-216ENST00000478603 F5H6K3 240 aa27.22■■□□□ 1.95
C9orf3-216ENST00000478603 NDUFB10O96000 172 aa27.22■■□□□ 1.95
C9orf3-216ENST00000478603 KLRC3Q07444 240 aa27.22■■□□□ 1.95
C9orf3-216ENST00000478603 ABRAQ8N0Z2 381 aa27.22■■□□□ 1.95
C9orf3-216ENST00000478603 NAPBQ9H115 298 aa27.22■■□□□ 1.95
C9orf3-216ENST00000478603 PLXNA1Q9UIW2 1896 aa27.21■■□□□ 1.95
C9orf3-216ENST00000478603 SLC25A27O95847 323 aa27.21■■□□□ 1.95
C9orf3-216ENST00000478603 FCER1AP12319 257 aa27.21■■□□□ 1.95
C9orf3-216ENST00000478603 SYN1P17600 705 aa27.21■■□□□ 1.95
C9orf3-216ENST00000478603 HDAC1Q13547 482 aaPredicted RBP27.21■■□□□ 1.95
C9orf3-216ENST00000478603 RIOX2Q8IUF8 465 aa27.21■■□□□ 1.95
C9orf3-216ENST00000478603 REPS2Q8NFH8 660 aa27.21■■□□□ 1.95
C9orf3-216ENST00000478603 CEP95Q96GE4 821 aa27.21■■□□□ 1.95
C9orf3-216ENST00000478603 ZNF287Q9HBT7 754 aa27.21■■□□□ 1.95
C9orf3-216ENST00000478603 ZNF214Q9UL59 606 aaPredicted RBP27.21■■□□□ 1.95
C9orf3-216ENST00000478603 STAT3P40763 770 aa27.2■■□□□ 1.94
C9orf3-216ENST00000478603 PRAMEF19Q5SWL8 479 aa27.2■■□□□ 1.94
C9orf3-216ENST00000478603 MMP19Q99542 508 aa27.2■■□□□ 1.94
C9orf3-216ENST00000478603 SLF1Q9BQI6 1058 aa27.2■■□□□ 1.94
C9orf3-216ENST00000478603 SLC5A4Q9NY91 659 aa27.2■■□□□ 1.94
C9orf3-216ENST00000478603 FOXP2O15409 715 aa27.19■■□□□ 1.94
C9orf3-216ENST00000478603 MSCO60682 206 aa27.19■■□□□ 1.94
C9orf3-216ENST00000478603 PPARAQ07869 468 aa27.19■■□□□ 1.94
C9orf3-216ENST00000478603 LRRC26Q2I0M4 334 aa27.19■■□□□ 1.94
C9orf3-216ENST00000478603 FAM47AQ5JRC9 791 aa27.19■■□□□ 1.94
C9orf3-216ENST00000478603 ANO1Q5XXA6 986 aa27.19■■□□□ 1.94
C9orf3-216ENST00000478603 MAML3Q96JK9 1138 aa27.19■■□□□ 1.94
C9orf3-216ENST00000478603 MTMR4Q9NYA4 1195 aa27.19■■□□□ 1.94
C9orf3-216ENST00000478603 SMCHD1A6NHR9 2005 aa27.18■■□□□ 1.94
C9orf3-216ENST00000478603 PGK2P07205 417 aa27.18■■□□□ 1.94
C9orf3-216ENST00000478603 PDE1AP54750 535 aa27.18■■□□□ 1.94
C9orf3-216ENST00000478603 LRRC47Q8N1G4 583 aaKnown RBP27.18■■□□□ 1.94
C9orf3-216ENST00000478603 TSPY3P0CV98 308 aa27.17■■□□□ 1.94
C9orf3-216ENST00000478603 TSPY8P0CW00 308 aa27.17■■□□□ 1.94
C9orf3-216ENST00000478603 PDE4BQ07343 736 aa27.17■■□□□ 1.94
C9orf3-216ENST00000478603 NEDD1Q8NHV4 660 aa27.17■■□□□ 1.94
C9orf3-216ENST00000478603 MKL1Q969V6 931 aa27.17■■□□□ 1.94
C9orf3-216ENST00000478603 EVI5LQ96CN4 794 aa27.17■■□□□ 1.94
C9orf3-216ENST00000478603 SENP6Q9GZR1 1112 aaPredicted RBP27.17■■□□□ 1.94
C9orf3-216ENST00000478603 TTLL1O95922 423 aa27.16■■□□□ 1.94
C9orf3-216ENST00000478603 TFAP4Q01664 338 aa27.16■■□□□ 1.94
C9orf3-216ENST00000478603 PLIN4Q96Q06 1357 aa27.16■■□□□ 1.94
C9orf3-216ENST00000478603 SLC3A2P08195 630 aaKnown RBP27.15■■□□□ 1.94
C9orf3-216ENST00000478603 CTDSPL2Q05D32 466 aa27.15■■□□□ 1.94
C9orf3-216ENST00000478603 KCTD2Q14681 263 aa27.15■■□□□ 1.94
C9orf3-216ENST00000478603 GJC2Q5T442 439 aaPredicted RBP27.15■■□□□ 1.94
C9orf3-216ENST00000478603 VPS53Q5VIR6 699 aa27.15■■□□□ 1.94
C9orf3-216ENST00000478603 GDF15Q99988 308 aa27.15■■□□□ 1.94
C9orf3-216ENST00000478603 INCENPQ9NQS7 918 aa27.15■■□□□ 1.94
C9orf3-216ENST00000478603 SEPT4O43236 478 aa27.14■■□□□ 1.94
C9orf3-216ENST00000478603 SNRNP48Q6IEG0 339 aaKnown RBP27.14■■□□□ 1.94
C9orf3-216ENST00000478603 PRPF38AQ8NAV1 312 aaKnown RBP27.14■■□□□ 1.94
C9orf3-216ENST00000478603 KIFC2Q96AC6 838 aa27.14■■□□□ 1.94
C9orf3-216ENST00000478603 LNPKQ9C0E8 428 aa27.14■■□□□ 1.94
C9orf3-216ENST00000478603 RIPK3Q9Y572 518 aa27.14■■□□□ 1.94
C9orf3-216ENST00000478603 DNM1LO00429 736 aa27.13■■□□□ 1.93
C9orf3-216ENST00000478603 COPB2P35606 906 aa27.13■■□□□ 1.93
C9orf3-216ENST00000478603 SLC4A3P48751 1232 aa27.13■■□□□ 1.93
C9orf3-216ENST00000478603 ZNF792Q3KQV3 632 aa27.13■■□□□ 1.93
C9orf3-216ENST00000478603 CPXCR1Q8N123 301 aa27.13■■□□□ 1.93
C9orf3-216ENST00000478603 TEX13BQ9BXU2 312 aa27.13■■□□□ 1.93
C9orf3-216ENST00000478603 SZT2Q5T011 3432 aa27.13■■□□□ 1.93
C9orf3-216ENST00000478603 A0A1W2PPC1 479 aa27.12■■□□□ 1.93
C9orf3-216ENST00000478603 MAGEA10P43363 369 aaPredicted RBP27.12■■□□□ 1.93
C9orf3-216ENST00000478603 ATN1P54259 1190 aaPredicted RBP27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms