RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 CASKIN1Q8WXD9 1431 aa5.97□□□□□ -1.45
GPNMB-210ENST00000478451 ABCA5Q8WWZ7 1642 aa5.96□□□□□ -1.45
GPNMB-210ENST00000478451 VAMP1P23763 118 aa5.96□□□□□ -1.46
GPNMB-210ENST00000478451 BUD31P41223 144 aaPredicted RBP5.96□□□□□ -1.46
GPNMB-210ENST00000478451 ARSHQ5FYA8 562 aa5.96□□□□□ -1.46
GPNMB-210ENST00000478451 OVOS1Q6IE37 1185 aa5.96□□□□□ -1.46
GPNMB-210ENST00000478451 USP48Q86UV5 1035 aa5.96□□□□□ -1.46
GPNMB-210ENST00000478451 KREMEN1Q96MU8 473 aa5.96□□□□□ -1.46
GPNMB-210ENST00000478451 KIF2CQ99661 725 aa5.96□□□□□ -1.46
GPNMB-210ENST00000478451 NT5C1AQ9BXI3 368 aa5.96□□□□□ -1.46
GPNMB-210ENST00000478451 GMIPQ9P107 970 aa5.96□□□□□ -1.46
GPNMB-210ENST00000478451 KCNH3Q9ULD8 1083 aa5.96□□□□□ -1.46
GPNMB-210ENST00000478451 POLR1AO95602 1720 aaPredicted RBP5.96□□□□□ -1.46
GPNMB-210ENST00000478451 LRRIQ1Q96JM4 1722 aa5.96□□□□□ -1.46
GPNMB-210ENST00000478451 EHBP1L1Q8N3D4 1523 aa5.95□□□□□ -1.46
GPNMB-210ENST00000478451 TOPBP1Q92547 1522 aa5.95□□□□□ -1.46
GPNMB-210ENST00000478451 PBRM1Q86U86 1689 aa5.95□□□□□ -1.46
GPNMB-210ENST00000478451 SLC22A31A6NKX4 558 aa5.95□□□□□ -1.46
GPNMB-210ENST00000478451 RAG1P15918 1043 aa5.95□□□□□ -1.46
GPNMB-210ENST00000478451 CLCQ05315 142 aa5.95□□□□□ -1.46
GPNMB-210ENST00000478451 ZNF394Q53GI3 561 aa5.95□□□□□ -1.46
GPNMB-210ENST00000478451 GK5Q6ZS86 529 aa5.95□□□□□ -1.46
GPNMB-210ENST00000478451 KSR1Q8IVT5 923 aa5.95□□□□□ -1.46
GPNMB-210ENST00000478451 FLAD1Q8NFF5 587 aa5.95□□□□□ -1.46
GPNMB-210ENST00000478451 BHLHE22Q8NFJ8 381 aaPredicted RBP5.95□□□□□ -1.46
GPNMB-210ENST00000478451 NKD1Q969G9 470 aa5.95□□□□□ -1.46
GPNMB-210ENST00000478451 RNF34Q969K3 372 aa5.95□□□□□ -1.46
GPNMB-210ENST00000478451 EAF1Q96JC9 268 aaPredicted RBP5.95□□□□□ -1.46
GPNMB-210ENST00000478451 ASPNQ9BXN1 380 aa5.95□□□□□ -1.46
GPNMB-210ENST00000478451 TRIT1Q9H3H1 467 aaKnown RBP5.95□□□□□ -1.46
GPNMB-210ENST00000478451 EHMT1Q9H9B1 1298 aa5.95□□□□□ -1.46
GPNMB-210ENST00000478451 JAG2Q9Y219 1238 aa5.95□□□□□ -1.46
GPNMB-210ENST00000478451 PCDHGB7Q9Y5F8 929 aa5.95□□□□□ -1.46
GPNMB-210ENST00000478451 HECW1Q76N89 1606 aa5.95□□□□□ -1.46
GPNMB-210ENST00000478451 RGS13O14921 159 aa5.94□□□□□ -1.46
GPNMB-210ENST00000478451 GBP1P32455 592 aa5.94□□□□□ -1.46
GPNMB-210ENST00000478451 MCM4P33991 863 aa5.94□□□□□ -1.46
GPNMB-210ENST00000478451 ZNF165P49910 485 aa5.94□□□□□ -1.46
GPNMB-210ENST00000478451 CHMP4BP1P59074 171 aa5.94□□□□□ -1.46
GPNMB-210ENST00000478451 TMPRSS7Q7RTY8 843 aa5.94□□□□□ -1.46
GPNMB-210ENST00000478451 SLITRK4Q8IW52 837 aa5.94□□□□□ -1.46
GPNMB-210ENST00000478451 REXO1Q8N1G1 1221 aaKnown RBP5.94□□□□□ -1.46
GPNMB-210ENST00000478451 GPR62Q9BZJ7 368 aa5.94□□□□□ -1.46
GPNMB-210ENST00000478451 DUSP15Q9H1R2 295 aaPredicted RBP5.94□□□□□ -1.46
GPNMB-210ENST00000478451 GPATCH2Q9NW75 528 aa5.94□□□□□ -1.46
GPNMB-210ENST00000478451 CTNND2Q9UQB3 1225 aa5.94□□□□□ -1.46
GPNMB-210ENST00000478451 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.94□□□□□ -1.46
GPNMB-210ENST00000478451 PTPN23Q9H3S7 1636 aa5.94□□□□□ -1.46
GPNMB-210ENST00000478451 CCDC18Q5T9S5 1454 aa5.94□□□□□ -1.46
GPNMB-210ENST00000478451 WASH4PA8MWX3 477 aa5.93□□□□□ -1.46
GPNMB-210ENST00000478451 SCAMP3O14828 347 aaKnown RBP5.93□□□□□ -1.46
GPNMB-210ENST00000478451 LRRN2O75325 713 aa5.93□□□□□ -1.46
GPNMB-210ENST00000478451 UBOX5O94941 541 aa5.93□□□□□ -1.46
GPNMB-210ENST00000478451 ESR1P03372 595 aa5.93□□□□□ -1.46
GPNMB-210ENST00000478451 SRFP11831 508 aa5.93□□□□□ -1.46
GPNMB-210ENST00000478451 TPP2P29144 1249 aaPredicted RBP5.93□□□□□ -1.46
GPNMB-210ENST00000478451 FAM168AQ92567 244 aa5.93□□□□□ -1.46
GPNMB-210ENST00000478451 POLA1P09884 1462 aaPredicted RBP5.93□□□□□ -1.46
GPNMB-210ENST00000478451 CARMIL2Q6F5E8 1435 aa5.92□□□□□ -1.46
GPNMB-210ENST00000478451 MEIS3P2A8K0S8 358 aa5.92□□□□□ -1.46
GPNMB-210ENST00000478451 POLR2BP30876 1174 aaKnown RBP5.92□□□□□ -1.46
GPNMB-210ENST00000478451 RNF4P78317 190 aa5.92□□□□□ -1.46
GPNMB-210ENST00000478451 GAB4Q2WGN9 574 aa5.92□□□□□ -1.46
GPNMB-210ENST00000478451 CDCP2Q5VXM1 449 aa5.92□□□□□ -1.46
GPNMB-210ENST00000478451 NLRC3Q7RTR2 1065 aa5.92□□□□□ -1.46
GPNMB-210ENST00000478451 TSPYL5Q86VY4 417 aaPredicted RBP5.92□□□□□ -1.46
GPNMB-210ENST00000478451 CREG2Q8IUH2 290 aa5.92□□□□□ -1.46
GPNMB-210ENST00000478451 TMEM40Q8WWA1 233 aa5.92□□□□□ -1.46
GPNMB-210ENST00000478451 ATG4CQ96DT6 458 aa5.92□□□□□ -1.46
GPNMB-210ENST00000478451 ALPK1Q96QP1 1244 aa5.92□□□□□ -1.46
GPNMB-210ENST00000478451 SLC38A3Q99624 504 aa5.92□□□□□ -1.46
GPNMB-210ENST00000478451 CNNM2Q9H8M5 875 aa5.92□□□□□ -1.46
GPNMB-210ENST00000478451 IGSF5Q9NSI5 407 aa5.92□□□□□ -1.46
GPNMB-210ENST00000478451 SLAMF8Q9P0V8 285 aa5.92□□□□□ -1.46
GPNMB-210ENST00000478451 DUSP13Q9UII6 198 aa5.92□□□□□ -1.46
GPNMB-210ENST00000478451 PHLDB1Q86UU1 1377 aa5.92□□□□□ -1.46
GPNMB-210ENST00000478451 FGD6Q6ZV73 1430 aa5.91□□□□□ -1.46
GPNMB-210ENST00000478451 SNAPC4Q5SXM2 1469 aa5.91□□□□□ -1.46
GPNMB-210ENST00000478451 RACK1P63244 317 aaKnown RBP5.91□□□□□ -1.46
GPNMB-210ENST00000478451 VWCEQ96DN2 955 aa5.91□□□□□ -1.46
GPNMB-210ENST00000478451 CCDC120Q96HB5 630 aa5.91□□□□□ -1.46
GPNMB-210ENST00000478451 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.91□□□□□ -1.46
GPNMB-210ENST00000478451 ANTXR1Q9H6X2 564 aa5.91□□□□□ -1.46
GPNMB-210ENST00000478451 C19orf73Q9NVV2 129 aa5.91□□□□□ -1.46
GPNMB-210ENST00000478451 DDX41Q9UJV9 622 aaKnown RBP5.91□□□□□ -1.46
GPNMB-210ENST00000478451 SHISA3A0PJX4 238 aa5.9□□□□□ -1.46
GPNMB-210ENST00000478451 LTKP29376 864 aa5.9□□□□□ -1.46
GPNMB-210ENST00000478451 GDNFP39905 211 aa5.9□□□□□ -1.46
GPNMB-210ENST00000478451 AFMP43652 599 aa5.9□□□□□ -1.46
GPNMB-210ENST00000478451 FAM50AQ14320 339 aaKnown RBP5.9□□□□□ -1.46
GPNMB-210ENST00000478451 LRRFIP1Q32MZ4 808 aaKnown RBP5.9□□□□□ -1.46
GPNMB-210ENST00000478451 C9orf131Q5VYM1 1079 aa5.9□□□□□ -1.46
GPNMB-210ENST00000478451 ZSWIM9Q86XI8 627 aa5.9□□□□□ -1.46
GPNMB-210ENST00000478451 CILP2Q8IUL8 1156 aa5.9□□□□□ -1.46
GPNMB-210ENST00000478451 SIAH1Q8IUQ4 282 aa5.9□□□□□ -1.46
GPNMB-210ENST00000478451 ZNRF3Q9ULT6 936 aa5.9□□□□□ -1.46
GPNMB-210ENST00000478451 MTUS2Q5JR59 1369 aa5.9□□□□□ -1.47
GPNMB-210ENST00000478451 TONSLQ96HA7 1378 aa5.9□□□□□ -1.47
GPNMB-210ENST00000478451 HFM1A2PYH4 1435 aa5.9□□□□□ -1.47
GPNMB-210ENST00000478451 FHOD3Q2V2M9 1422 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms