RNA–Protein interactions for RNA: ENST00000478232.1

RCC1-211, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 2

Gene RCC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-211ENST00000478232 MKL1Q969V6 931 aa16.42■□□□□ 0.22
RCC1-211ENST00000478232 FLRT1Q9NZU1 646 aa16.42■□□□□ 0.22
RCC1-211ENST00000478232 F5H6K3 240 aa16.41■□□□□ 0.22
RCC1-211ENST00000478232 ADORA2AP29274 412 aa16.41■□□□□ 0.22
RCC1-211ENST00000478232 MNX1P50219 401 aaPredicted RBP16.41■□□□□ 0.22
RCC1-211ENST00000478232 PDE1AP54750 535 aa16.41■□□□□ 0.22
RCC1-211ENST00000478232 PDE4BQ07343 736 aa16.41■□□□□ 0.22
RCC1-211ENST00000478232 KLRC3Q07444 240 aa16.41■□□□□ 0.22
RCC1-211ENST00000478232 TMEM132BQ14DG7 1078 aa16.41■□□□□ 0.22
RCC1-211ENST00000478232 FAM83BQ5T0W9 1011 aa16.41■□□□□ 0.22
RCC1-211ENST00000478232 OLFML2BQ68BL8 750 aa16.41■□□□□ 0.22
RCC1-211ENST00000478232 SAMD1Q6SPF0 538 aaPredicted RBP16.41■□□□□ 0.22
RCC1-211ENST00000478232 NAPBQ9H115 298 aa16.41■□□□□ 0.22
RCC1-211ENST00000478232 RWDD1Q9H446 243 aaPredicted RBP16.41■□□□□ 0.22
RCC1-211ENST00000478232 C11orf49Q9H6J7 331 aa16.41■□□□□ 0.22
RCC1-211ENST00000478232 FBXO28Q9NVF7 368 aa16.41■□□□□ 0.22
RCC1-211ENST00000478232 CLIP2Q9UDT6 1046 aa16.41■□□□□ 0.22
RCC1-211ENST00000478232 CEP290O15078 2479 aa16.4■□□□□ 0.22
RCC1-211ENST00000478232 IGKV6D-41A0A0C4DH26 115 aa16.4■□□□□ 0.22
RCC1-211ENST00000478232 VWA5AO00534 786 aa16.4■□□□□ 0.22
RCC1-211ENST00000478232 MSCO60682 206 aa16.4■□□□□ 0.22
RCC1-211ENST00000478232 IGHA2P01877 340 aa16.4■□□□□ 0.22
RCC1-211ENST00000478232 FCER1AP12319 257 aa16.4■□□□□ 0.22
RCC1-211ENST00000478232 STAT3P40763 770 aa16.4■□□□□ 0.22
RCC1-211ENST00000478232 CHRDL2Q6WN34 429 aa16.4■□□□□ 0.22
RCC1-211ENST00000478232 RIOX2Q8IUF8 465 aa16.4■□□□□ 0.22
RCC1-211ENST00000478232 MTMR4Q9NYA4 1195 aa16.4■□□□□ 0.22
RCC1-211ENST00000478232 PPP1R9AQ9ULJ8 1098 aa16.4■□□□□ 0.22
RCC1-211ENST00000478232 SYNPO2Q9UMS6 1093 aa16.4■□□□□ 0.22
RCC1-211ENST00000478232 COBLO75128 1261 aa16.39■□□□□ 0.21
RCC1-211ENST00000478232 PRDM1O75626 825 aa16.39■□□□□ 0.21
RCC1-211ENST00000478232 CNGA1P29973 690 aa16.39■□□□□ 0.21
RCC1-211ENST00000478232 CYP2C19P33261 490 aa16.39■□□□□ 0.21
RCC1-211ENST00000478232 COPB2P35606 906 aa16.39■□□□□ 0.21
RCC1-211ENST00000478232 PPARAQ07869 468 aa16.39■□□□□ 0.21
RCC1-211ENST00000478232 PRPF38AQ8NAV1 312 aaKnown RBP16.39■□□□□ 0.21
RCC1-211ENST00000478232 NEDD1Q8NHV4 660 aa16.39■□□□□ 0.21
RCC1-211ENST00000478232 HELLSQ9NRZ9 838 aa16.39■□□□□ 0.21
RCC1-211ENST00000478232 PCDH10Q9P2E7 1040 aa16.39■□□□□ 0.21
RCC1-211ENST00000478232 TTLL1O95922 423 aa16.38■□□□□ 0.21
RCC1-211ENST00000478232 NDUFB10O96000 172 aa16.38■□□□□ 0.21
RCC1-211ENST00000478232 TSPY3P0CV98 308 aa16.38■□□□□ 0.21
RCC1-211ENST00000478232 TSPY8P0CW00 308 aa16.38■□□□□ 0.21
RCC1-211ENST00000478232 TFAP4Q01664 338 aa16.38■□□□□ 0.21
RCC1-211ENST00000478232 SMC5Q8IY18 1101 aa16.38■□□□□ 0.21
RCC1-211ENST00000478232 CEP95Q96GE4 821 aa16.38■□□□□ 0.21
RCC1-211ENST00000478232 SLF1Q9BQI6 1058 aa16.38■□□□□ 0.21
RCC1-211ENST00000478232 DDX20Q9UHI6 824 aaKnown RBP16.38■□□□□ 0.21
RCC1-211ENST00000478232 MYH8P13535 1937 aa16.38■□□□□ 0.21
RCC1-211ENST00000478232 RLFQ13129 1914 aa16.37■□□□□ 0.21
RCC1-211ENST00000478232 COL6A1P12109 1028 aa16.37■□□□□ 0.21
RCC1-211ENST00000478232 KCTD2Q14681 263 aa16.37■□□□□ 0.21
RCC1-211ENST00000478232 PPP4R3BQ5MIZ7 849 aa16.37■□□□□ 0.21
RCC1-211ENST00000478232 NUP88Q99567 741 aaPredicted RBP16.37■□□□□ 0.21
RCC1-211ENST00000478232 RBM27Q9P2N5 1060 aaKnown RBP16.37■□□□□ 0.21
RCC1-211ENST00000478232 ZNF214Q9UL59 606 aaPredicted RBP16.37■□□□□ 0.21
RCC1-211ENST00000478232 ZBED4O75132 1171 aa16.36■□□□□ 0.21
RCC1-211ENST00000478232 CYBAP13498 195 aa16.36■□□□□ 0.21
RCC1-211ENST00000478232 FXR1P51114 621 aaKnown RBP eCLIP16.36■□□□□ 0.21
RCC1-211ENST00000478232 ALX1Q15699 326 aa16.36■□□□□ 0.21
RCC1-211ENST00000478232 CCDC129Q6ZRS4 1044 aa16.36■□□□□ 0.21
RCC1-211ENST00000478232 GMCL1P1Q8NEA9 526 aa16.36■□□□□ 0.21
RCC1-211ENST00000478232 TRPV1Q8NER1 839 aa16.36■□□□□ 0.21
RCC1-211ENST00000478232 REPS2Q8NFH8 660 aa16.36■□□□□ 0.21
RCC1-211ENST00000478232 MAML3Q96JK9 1138 aa16.36■□□□□ 0.21
RCC1-211ENST00000478232 MMP19Q99542 508 aa16.36■□□□□ 0.21
RCC1-211ENST00000478232 LNPKQ9C0E8 428 aa16.36■□□□□ 0.21
RCC1-211ENST00000478232 PRO3102Q9H379 93 aa16.36■□□□□ 0.21
RCC1-211ENST00000478232 FEM1BQ9UK73 627 aa16.36■□□□□ 0.21
RCC1-211ENST00000478232 DIS3Q9Y2L1 958 aaKnown RBP16.36■□□□□ 0.21
RCC1-211ENST00000478232 ATP2A1O14983 1001 aa16.35■□□□□ 0.21
RCC1-211ENST00000478232 FOXP2O15409 715 aa16.35■□□□□ 0.21
RCC1-211ENST00000478232 MCMDC2Q4G0Z9 681 aa16.35■□□□□ 0.21
RCC1-211ENST00000478232 FAM47AQ5JRC9 791 aa16.35■□□□□ 0.21
RCC1-211ENST00000478232 B4GALNT3Q6L9W6 998 aa16.35■□□□□ 0.21
RCC1-211ENST00000478232 C7orf61Q8IZ16 206 aa16.35■□□□□ 0.21
RCC1-211ENST00000478232 ARRDC4Q8NCT1 418 aa16.35■□□□□ 0.21
RCC1-211ENST00000478232 TEX13BQ9BXU2 312 aa16.35■□□□□ 0.21
RCC1-211ENST00000478232 ANAPC4Q9UJX5 808 aa16.35■□□□□ 0.21
RCC1-211ENST00000478232 CTDP1Q9Y5B0 961 aaPredicted RBP16.35■□□□□ 0.21
RCC1-211ENST00000478232 A0A1W2PPC1 479 aa16.34■□□□□ 0.21
RCC1-211ENST00000478232 SEPT4O43236 478 aa16.34■□□□□ 0.21
RCC1-211ENST00000478232 FDX1P10109 184 aa16.34■□□□□ 0.21
RCC1-211ENST00000478232 SLFN13Q68D06 897 aa16.34■□□□□ 0.21
RCC1-211ENST00000478232 CHD1LQ86WJ1 897 aa16.34■□□□□ 0.21
RCC1-211ENST00000478232 NRBP1Q9UHY1 535 aa16.34■□□□□ 0.21
RCC1-211ENST00000478232 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.34■□□□□ 0.21
RCC1-211ENST00000478232 PFASO15067 1338 aa16.34■□□□□ 0.21
RCC1-211ENST00000478232 PLIN4Q96Q06 1357 aa16.34■□□□□ 0.21
RCC1-211ENST00000478232 A0A0G2JMZ2 1700 aa16.33■□□□□ 0.21
RCC1-211ENST00000478232 TSPY2A6NKD2 308 aa16.33■□□□□ 0.2
RCC1-211ENST00000478232 TRIM6-TRIM34B2RNG4 842 aa16.33■□□□□ 0.2
RCC1-211ENST00000478232 DNM1LO00429 736 aa16.33■□□□□ 0.2
RCC1-211ENST00000478232 IGHDP01880 384 aa16.33■□□□□ 0.2
RCC1-211ENST00000478232 PGK2P07205 417 aa16.33■□□□□ 0.2
RCC1-211ENST00000478232 BMP3P12645 472 aa16.33■□□□□ 0.2
RCC1-211ENST00000478232 CTDSPL2Q05D32 466 aa16.33■□□□□ 0.2
RCC1-211ENST00000478232 ZNF792Q3KQV3 632 aa16.33■□□□□ 0.2
RCC1-211ENST00000478232 PRAMEF19Q5SWL8 479 aa16.33■□□□□ 0.2
RCC1-211ENST00000478232 VPS53Q5VIR6 699 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms