RNA–Protein interactions for RNA: ENST00000477546.5

TRAIP-206, Transcript of TRAF interacting protein, humanhuman

TSL 2

Gene TRAIP, Length 1,175 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-206ENST00000477546 CERS4Q9HA82 394 aa12.79□□□□□ -0.36
TRAIP-206ENST00000477546 PDS5AQ29RF7 1337 aaKnown RBP12.79□□□□□ -0.36
TRAIP-206ENST00000477546 USP34Q70CQ2 3546 aa12.78□□□□□ -0.36
TRAIP-206ENST00000477546 EYA2O00167 538 aa12.78□□□□□ -0.36
TRAIP-206ENST00000477546 ARVCFO00192 962 aa12.78□□□□□ -0.36
TRAIP-206ENST00000477546 TLR3O15455 904 aaKnown RBP12.78□□□□□ -0.36
TRAIP-206ENST00000477546 USP14P54578 494 aa12.78□□□□□ -0.36
TRAIP-206ENST00000477546 MECOMQ03112 1051 aa12.78□□□□□ -0.36
TRAIP-206ENST00000477546 ZYXQ15942 572 aaKnown RBP12.78□□□□□ -0.36
TRAIP-206ENST00000477546 KCNA10Q16322 511 aa12.78□□□□□ -0.36
TRAIP-206ENST00000477546 PRSS33Q8NF86 280 aa12.78□□□□□ -0.36
TRAIP-206ENST00000477546 ARNTL2Q8WYA1 636 aa12.78□□□□□ -0.36
TRAIP-206ENST00000477546 LENG1Q96BZ8 264 aaPredicted RBP12.78□□□□□ -0.36
TRAIP-206ENST00000477546 SPATC1LQ9H0A9 340 aa12.78□□□□□ -0.36
TRAIP-206ENST00000477546 UBE2ZQ9H832 354 aaPredicted RBP12.78□□□□□ -0.36
TRAIP-206ENST00000477546 SYNRGQ9UMZ2 1314 aa12.78□□□□□ -0.36
TRAIP-206ENST00000477546 BRWD1Q9NSI6 2320 aa12.78□□□□□ -0.36
TRAIP-206ENST00000477546 A0A0U1RQG5 324 aaPredicted RBP12.77□□□□□ -0.37
TRAIP-206ENST00000477546 ZNF865P0CJ78 1059 aaPredicted RBP12.77□□□□□ -0.37
TRAIP-206ENST00000477546 GRB10Q13322 594 aa12.77□□□□□ -0.37
TRAIP-206ENST00000477546 RASGRF1Q13972 1273 aa12.77□□□□□ -0.37
TRAIP-206ENST00000477546 ATP2B3Q16720 1220 aa12.77□□□□□ -0.37
TRAIP-206ENST00000477546 CRACR2BQ8N4Y2 399 aaPredicted RBP12.77□□□□□ -0.37
TRAIP-206ENST00000477546 ZNF384Q8TF68 577 aa12.77□□□□□ -0.37
TRAIP-206ENST00000477546 FRAT1Q92837 279 aaPredicted RBP12.77□□□□□ -0.37
TRAIP-206ENST00000477546 PRRX2Q99811 253 aa12.77□□□□□ -0.37
TRAIP-206ENST00000477546 KIAA1683Q9H0B3 1180 aa12.77□□□□□ -0.37
TRAIP-206ENST00000477546 HIPK3Q9H422 1215 aa12.77□□□□□ -0.37
TRAIP-206ENST00000477546 MROH8Q9H579 483 aa12.77□□□□□ -0.37
TRAIP-206ENST00000477546 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.76□□□□□ -0.37
TRAIP-206ENST00000477546 ZBBXA8MT70 800 aa12.76□□□□□ -0.37
TRAIP-206ENST00000477546 LPXNO60711 386 aa12.76□□□□□ -0.37
TRAIP-206ENST00000477546 BCAR3O75815 825 aa12.76□□□□□ -0.37
TRAIP-206ENST00000477546 CD4P01730 458 aa12.76□□□□□ -0.37
TRAIP-206ENST00000477546 IL9P15248 144 aa12.76□□□□□ -0.37
TRAIP-206ENST00000477546 TAL1P17542 331 aaPredicted RBP12.76□□□□□ -0.37
TRAIP-206ENST00000477546 CST5P28325 142 aaPredicted RBP12.76□□□□□ -0.37
TRAIP-206ENST00000477546 TAP1Q03518 808 aa12.76□□□□□ -0.37
TRAIP-206ENST00000477546 ERICH6Q7L0X2 663 aa12.76□□□□□ -0.37
TRAIP-206ENST00000477546 FOXP4Q8IVH2 680 aaPredicted RBP12.76□□□□□ -0.37
TRAIP-206ENST00000477546 TEX11Q8IYF3 940 aa12.76□□□□□ -0.37
TRAIP-206ENST00000477546 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.76□□□□□ -0.37
TRAIP-206ENST00000477546 TINF2Q9BSI4 451 aa12.76□□□□□ -0.37
TRAIP-206ENST00000477546 TRIM34Q9BYJ4 488 aa12.76□□□□□ -0.37
TRAIP-206ENST00000477546 RPAP3Q9H6T3 665 aaPredicted RBP12.76□□□□□ -0.37
TRAIP-206ENST00000477546 SMCHD1A6NHR9 2005 aa12.76□□□□□ -0.37
TRAIP-206ENST00000477546 ZNF536O15090 1300 aa12.75□□□□□ -0.37
TRAIP-206ENST00000477546 IPO8O15397 1037 aaKnown RBP12.75□□□□□ -0.37
TRAIP-206ENST00000477546 SIPA1L1O43166 1804 aa12.75□□□□□ -0.37
TRAIP-206ENST00000477546 GH2P01242 217 aa12.75□□□□□ -0.37
TRAIP-206ENST00000477546 LDHCP07864 332 aa12.75□□□□□ -0.37
TRAIP-206ENST00000477546 UBTFL1P0CB47 393 aaPredicted RBP12.75□□□□□ -0.37
TRAIP-206ENST00000477546 GSTO1P78417 241 aa12.75□□□□□ -0.37
TRAIP-206ENST00000477546 UMODL1Q5DID0 1318 aa12.75□□□□□ -0.37
TRAIP-206ENST00000477546 CCDC102BQ68D86 513 aa12.75□□□□□ -0.37
TRAIP-206ENST00000477546 RPUSD2Q8IZ73 545 aaKnown RBP12.75□□□□□ -0.37
TRAIP-206ENST00000477546 PCSK9Q8NBP7 692 aaKnown RBP12.75□□□□□ -0.37
TRAIP-206ENST00000477546 ARHGAP45Q92619 1136 aa12.75□□□□□ -0.37
TRAIP-206ENST00000477546 VTI1AQ96AJ9 217 aa12.75□□□□□ -0.37
TRAIP-206ENST00000477546 USP44Q9H0E7 712 aa12.75□□□□□ -0.37
TRAIP-206ENST00000477546 LMCD1Q9NZU5 365 aa12.75□□□□□ -0.37
TRAIP-206ENST00000477546 GRXCR2A6NFK2 248 aa12.74□□□□□ -0.37
TRAIP-206ENST00000477546 FCER1AP12319 257 aa12.74□□□□□ -0.37
TRAIP-206ENST00000477546 TRIM27P14373 513 aa12.74□□□□□ -0.37
TRAIP-206ENST00000477546 KCNA5P22460 613 aa12.74□□□□□ -0.37
TRAIP-206ENST00000477546 PUS10Q3MIT2 529 aaKnown RBP12.74□□□□□ -0.37
TRAIP-206ENST00000477546 PTCRAQ6ISU1 281 aaPredicted RBP12.74□□□□□ -0.37
TRAIP-206ENST00000477546 ATG9AQ7Z3C6 839 aa12.74□□□□□ -0.37
TRAIP-206ENST00000477546 NCAPG2Q86XI2 1143 aa12.74□□□□□ -0.37
TRAIP-206ENST00000477546 MB21D1Q8N884 522 aa12.74□□□□□ -0.37
TRAIP-206ENST00000477546 HOXC10Q9NYD6 342 aa12.74□□□□□ -0.37
TRAIP-206ENST00000477546 CNPY2Q9Y2B0 182 aa12.74□□□□□ -0.37
TRAIP-206ENST00000477546 DIS3Q9Y2L1 958 aaKnown RBP12.74□□□□□ -0.37
TRAIP-206ENST00000477546 SPTBN4Q9H254 2564 aa12.74□□□□□ -0.37
TRAIP-206ENST00000477546 CACNA1BQ00975 2339 aa12.73□□□□□ -0.37
TRAIP-206ENST00000477546 MYADML2A6NDP7 307 aa12.73□□□□□ -0.37
TRAIP-206ENST00000477546 ARHGEF15O94989 841 aa12.73□□□□□ -0.37
TRAIP-206ENST00000477546 ASGR1P07306 291 aa12.73□□□□□ -0.37
TRAIP-206ENST00000477546 CCL23P55773 120 aa12.73□□□□□ -0.37
TRAIP-206ENST00000477546 COG2Q14746 738 aa12.73□□□□□ -0.37
TRAIP-206ENST00000477546 ATF7IPQ6VMQ6 1270 aa12.73□□□□□ -0.37
TRAIP-206ENST00000477546 CLUAP1Q96AJ1 413 aa12.73□□□□□ -0.37
TRAIP-206ENST00000477546 VWCEQ96DN2 955 aa12.73□□□□□ -0.37
TRAIP-206ENST00000477546 WNT8AQ9H1J5 351 aa12.73□□□□□ -0.37
TRAIP-206ENST00000477546 C5orf42Q9H799 3197 aa12.73□□□□□ -0.37
TRAIP-206ENST00000477546 PTPRZ1P23471 2315 aaPredicted RBP12.72□□□□□ -0.37
TRAIP-206ENST00000477546 DUSP11O75319 330 aaKnown RBP12.72□□□□□ -0.37
TRAIP-206ENST00000477546 PFKMP08237 780 aa12.72□□□□□ -0.37
TRAIP-206ENST00000477546 RFX5P48382 616 aaPredicted RBP12.72□□□□□ -0.37
TRAIP-206ENST00000477546 TCF15Q12870 199 aa12.72□□□□□ -0.37
TRAIP-206ENST00000477546 IER5LQ5T953 404 aa12.72□□□□□ -0.37
TRAIP-206ENST00000477546 ZKSCAN2Q63HK3 967 aa12.72□□□□□ -0.37
TRAIP-206ENST00000477546 SH3RF3Q8TEJ3 882 aaPredicted RBP12.72□□□□□ -0.37
TRAIP-206ENST00000477546 NSUN4Q96CB9 384 aaKnown RBP12.72□□□□□ -0.37
TRAIP-206ENST00000477546 SLC9A7Q96T83 725 aa12.72□□□□□ -0.37
TRAIP-206ENST00000477546 MEIS3Q99687 375 aa12.72□□□□□ -0.37
TRAIP-206ENST00000477546 NOC4LQ9BVI4 516 aaKnown RBP12.72□□□□□ -0.37
TRAIP-206ENST00000477546 CEP126Q9P2H0 1117 aa12.72□□□□□ -0.37
TRAIP-206ENST00000477546 FAM184BQ9ULE4 1060 aa12.72□□□□□ -0.37
TRAIP-206ENST00000477546 TNNQ9UQP3 1299 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms