RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 GINM1Q9NU53 330 aa20.73■□□□□ 0.91
SREBF1-211ENST00000476994 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.73■□□□□ 0.91
SREBF1-211ENST00000476994 TNKSO95271 1327 aa20.73■□□□□ 0.91
SREBF1-211ENST00000476994 NEK4P51957 841 aa20.72■□□□□ 0.91
SREBF1-211ENST00000476994 PABPC4Q13310 644 aaKnown RBP eCLIP20.72■□□□□ 0.91
SREBF1-211ENST00000476994 SEPT2Q15019 361 aa20.72■□□□□ 0.91
SREBF1-211ENST00000476994 SLAIN1Q8ND83 568 aa20.72■□□□□ 0.91
SREBF1-211ENST00000476994 TMEM87BQ96K49 555 aa20.72■□□□□ 0.91
SREBF1-211ENST00000476994 ZSCAN10Q96SZ4 725 aaPredicted RBP20.72■□□□□ 0.91
SREBF1-211ENST00000476994 LY9Q9HBG7 655 aa20.72■□□□□ 0.91
SREBF1-211ENST00000476994 AGTPBP1Q9UPW5 1226 aa20.72■□□□□ 0.91
SREBF1-211ENST00000476994 CD2BP2O95400 341 aaKnown RBP20.71■□□□□ 0.91
SREBF1-211ENST00000476994 CTGFP29279 349 aa20.71■□□□□ 0.91
SREBF1-211ENST00000476994 IQCA1Q86XH1 822 aa20.71■□□□□ 0.91
SREBF1-211ENST00000476994 PROCA1Q8NCQ7 364 aaPredicted RBP20.71■□□□□ 0.91
SREBF1-211ENST00000476994 AS3MTQ9HBK9 375 aa20.71■□□□□ 0.91
SREBF1-211ENST00000476994 PDRG1Q9NUG6 133 aa20.71■□□□□ 0.91
SREBF1-211ENST00000476994 MTMR4Q9NYA4 1195 aa20.71■□□□□ 0.91
SREBF1-211ENST00000476994 PARP14Q460N5 1801 aa20.71■□□□□ 0.91
SREBF1-211ENST00000476994 LOC285556D6RIA3 1793 aa20.7■□□□□ 0.9
SREBF1-211ENST00000476994 TNPO2O14787 897 aaKnown RBP20.7■□□□□ 0.9
SREBF1-211ENST00000476994 ASNSP08243 561 aa20.7■□□□□ 0.9
SREBF1-211ENST00000476994 LIFRP42702 1097 aa20.7■□□□□ 0.9
SREBF1-211ENST00000476994 PRKCZQ05513 592 aa20.7■□□□□ 0.9
SREBF1-211ENST00000476994 Q6ZUG5 572 aa20.7■□□□□ 0.9
SREBF1-211ENST00000476994 ZNF280CQ8ND82 737 aa20.7■□□□□ 0.9
SREBF1-211ENST00000476994 COA7Q96BR5 231 aa20.7■□□□□ 0.9
SREBF1-211ENST00000476994 MPHOSPH10O00566 681 aaKnown RBP20.69■□□□□ 0.9
SREBF1-211ENST00000476994 IFIT3O14879 490 aaKnown RBP20.69■□□□□ 0.9
SREBF1-211ENST00000476994 AK2P54819 239 aa20.69■□□□□ 0.9
SREBF1-211ENST00000476994 EVCP57679 992 aa20.69■□□□□ 0.9
SREBF1-211ENST00000476994 SPP2Q13103 211 aa20.69■□□□□ 0.9
SREBF1-211ENST00000476994 TMEM67Q5HYA8 995 aa20.69■□□□□ 0.9
SREBF1-211ENST00000476994 CCDC84Q86UT8 332 aaPredicted RBP20.69■□□□□ 0.9
SREBF1-211ENST00000476994 SGMS1Q86VZ5 419 aa20.69■□□□□ 0.9
SREBF1-211ENST00000476994 DGKHQ86XP1 1220 aa20.69■□□□□ 0.9
SREBF1-211ENST00000476994 IL27Q8NEV9 243 aa20.69■□□□□ 0.9
SREBF1-211ENST00000476994 UBAC1Q9BSL1 405 aa20.69■□□□□ 0.9
SREBF1-211ENST00000476994 RNF208Q9H0X6 261 aa20.69■□□□□ 0.9
SREBF1-211ENST00000476994 KANSL2Q9H9L4 492 aa20.69■□□□□ 0.9
SREBF1-211ENST00000476994 CABP5Q9NP86 173 aa20.69■□□□□ 0.9
SREBF1-211ENST00000476994 DOCK3Q8IZD9 2030 aa20.69■□□□□ 0.9
SREBF1-211ENST00000476994 USP17L5A8MUK1 530 aa20.68■□□□□ 0.9
SREBF1-211ENST00000476994 CCL5P13501 91 aa20.68■□□□□ 0.9
SREBF1-211ENST00000476994 MTFR1Q15390 333 aa20.68■□□□□ 0.9
SREBF1-211ENST00000476994 CCDC178Q5BJE1 867 aa20.68■□□□□ 0.9
SREBF1-211ENST00000476994 NYAP2Q9P242 653 aa20.68■□□□□ 0.9
SREBF1-211ENST00000476994 CEP290O15078 2479 aa20.68■□□□□ 0.9
SREBF1-211ENST00000476994 MYH6P13533 1939 aa20.67■□□□□ 0.9
SREBF1-211ENST00000476994 A0A1W2PRG0 241 aa20.67■□□□□ 0.9
SREBF1-211ENST00000476994 ADCY3O60266 1144 aa20.67■□□□□ 0.9
SREBF1-211ENST00000476994 GJB1P08034 283 aa20.67■□□□□ 0.9
SREBF1-211ENST00000476994 EEF2P13639 858 aaKnown RBP20.67■□□□□ 0.9
SREBF1-211ENST00000476994 GCLCP48506 637 aaPredicted RBP20.67■□□□□ 0.9
SREBF1-211ENST00000476994 ICA1Q05084 483 aa20.67■□□□□ 0.9
SREBF1-211ENST00000476994 RAB3GAP1Q15042 981 aa20.67■□□□□ 0.9
SREBF1-211ENST00000476994 HABP4Q5JVS0 413 aaKnown RBP20.67■□□□□ 0.9
SREBF1-211ENST00000476994 MKL1Q969V6 931 aa20.67■□□□□ 0.9
SREBF1-211ENST00000476994 TMEM47Q9BQJ4 181 aa20.67■□□□□ 0.9
SREBF1-211ENST00000476994 BRPF3Q9ULD4 1205 aa20.67■□□□□ 0.9
SREBF1-211ENST00000476994 TTLL1O95922 423 aa20.66■□□□□ 0.9
SREBF1-211ENST00000476994 GJA8P48165 433 aa20.66■□□□□ 0.9
SREBF1-211ENST00000476994 FLT3LGP49771 235 aa20.66■□□□□ 0.9
SREBF1-211ENST00000476994 WTAPQ15007 396 aa20.66■□□□□ 0.9
SREBF1-211ENST00000476994 SART3Q15020 963 aaKnown RBP20.66■□□□□ 0.9
SREBF1-211ENST00000476994 FAM110CQ1W6H9 321 aa20.66■□□□□ 0.9
SREBF1-211ENST00000476994 ANKRD13CQ8N6S4 541 aa20.66■□□□□ 0.9
SREBF1-211ENST00000476994 ACER1Q8TDN7 264 aa20.66■□□□□ 0.9
SREBF1-211ENST00000476994 BRF1Q92994 677 aa20.66■□□□□ 0.9
SREBF1-211ENST00000476994 HTATIP2Q9BUP3 242 aa20.66■□□□□ 0.9
SREBF1-211ENST00000476994 RLFQ13129 1914 aa20.66■□□□□ 0.9
SREBF1-211ENST00000476994 BAZ2BQ9UIF8 2168 aaKnown RBP20.66■□□□□ 0.9
SREBF1-211ENST00000476994 NID2Q14112 1375 aa20.65■□□□□ 0.9
SREBF1-211ENST00000476994 TOP1P11387 765 aaKnown RBP20.65■□□□□ 0.9
SREBF1-211ENST00000476994 CAPN2P17655 700 aa20.65■□□□□ 0.9
SREBF1-211ENST00000476994 HMGCS2P54868 508 aa20.65■□□□□ 0.9
SREBF1-211ENST00000476994 APOBRQ0VD83 1088 aa20.65■□□□□ 0.9
SREBF1-211ENST00000476994 TREML2Q5T2D2 321 aa20.65■□□□□ 0.9
SREBF1-211ENST00000476994 IFIT1BQ5T764 474 aaKnown RBP20.65■□□□□ 0.9
SREBF1-211ENST00000476994 PXYLP1Q8TE99 480 aa20.65■□□□□ 0.9
SREBF1-211ENST00000476994 DPF3Q92784 378 aa20.65■□□□□ 0.9
SREBF1-211ENST00000476994 WDR18Q9BV38 432 aa20.65■□□□□ 0.9
SREBF1-211ENST00000476994 TMOD4Q9NZQ9 345 aa20.65■□□□□ 0.9
SREBF1-211ENST00000476994 GABRQQ9UN88 632 aa20.65■□□□□ 0.9
SREBF1-211ENST00000476994 IRF5Q13568 498 aa20.64■□□□□ 0.89
SREBF1-211ENST00000476994 PPP4R3BQ5MIZ7 849 aa20.64■□□□□ 0.89
SREBF1-211ENST00000476994 SNX21Q969T3 373 aa20.64■□□□□ 0.89
SREBF1-211ENST00000476994 LARP6Q9BRS8 491 aaKnown RBP20.64■□□□□ 0.89
SREBF1-211ENST00000476994 CLIP2Q9UDT6 1046 aa20.64■□□□□ 0.89
SREBF1-211ENST00000476994 TPCN1Q9ULQ1 816 aa20.64■□□□□ 0.89
SREBF1-211ENST00000476994 SYNPO2Q9UMS6 1093 aa20.64■□□□□ 0.89
SREBF1-211ENST00000476994 STX8Q9UNK0 236 aa20.64■□□□□ 0.89
SREBF1-211ENST00000476994 ERICH2A1L162 156 aa20.63■□□□□ 0.89
SREBF1-211ENST00000476994 ST18O60284 1047 aa20.63■□□□□ 0.89
SREBF1-211ENST00000476994 LARGE1O95461 756 aa20.63■□□□□ 0.89
SREBF1-211ENST00000476994 TROAPQ12815 778 aa20.63■□□□□ 0.89
SREBF1-211ENST00000476994 APOA5Q6Q788 366 aa20.63■□□□□ 0.89
SREBF1-211ENST00000476994 LRRC47Q8N1G4 583 aaKnown RBP20.63■□□□□ 0.89
SREBF1-211ENST00000476994 TMTC2Q8N394 836 aa20.63■□□□□ 0.89
SREBF1-211ENST00000476994 TMX2Q9Y320 296 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms