RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 LMNB1P20700 586 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 USP5P45974 858 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 KCNJ6P48051 423 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 CLCN2P51788 898 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 AMPD3Q01432 767 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 CBX3Q13185 183 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 WDR43Q15061 677 aaKnown RBP eCLIP4.64□□□□□ -1.67
CD55-208ENST00000476590 GNPTABQ3T906 1256 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 PARP10Q53GL7 1025 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 THOC7Q6I9Y2 204 aaKnown RBP4.64□□□□□ -1.67
CD55-208ENST00000476590 LYPD4Q6UWN0 246 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 UBE2Q1Q7Z7E8 422 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 LUZP1Q86V48 1076 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 C1orf131Q8NDD1 294 aaKnown RBP4.64□□□□□ -1.67
CD55-208ENST00000476590 GIMAP1Q8WWP7 306 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 IWS1Q96ST2 819 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 TCHPQ9BT92 498 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 CAPS2Q9BXY5 557 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 TRIM5Q9C035 493 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 QTRT2Q9H974 415 aaKnown RBP4.64□□□□□ -1.67
CD55-208ENST00000476590 SLC40A1Q9NP59 571 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 GINM1Q9NU53 330 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 ATXN10Q9UBB4 475 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 SEL1LQ9UBV2 794 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 TCEAL9Q9UHQ7 104 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 TMCO1Q9UM00 188 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 BICDL2A1A5D9 508 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 TRIM64CA6NLI5 447 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 P4HA2O15460 535 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 MGRN1O60291 552 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 GADD45BO75293 160 aaPredicted RBP4.64□□□□□ -1.67
CD55-208ENST00000476590 MTRF1O75570 445 aaKnown RBP4.64□□□□□ -1.67
CD55-208ENST00000476590 BCAR3O75815 825 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 BBOX1O75936 387 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 LUC7L3O95232 432 aaKnown RBP4.64□□□□□ -1.67
CD55-208ENST00000476590 ABL1P00519 1130 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 CCDC159P0C7I6 412 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 BCRP11274 1271 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 CNGA1P29973 690 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 AMPHP49418 695 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 GNAQP50148 359 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 ZNF132P52740 706 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 ARPC4P59998 168 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 BLMHQ13867 455 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 MRPL58Q14197 206 aaKnown RBP4.64□□□□□ -1.67
CD55-208ENST00000476590 COL19A1Q14993 1142 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 CCDC152Q4G0S7 254 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 PABPC1LQ4VXU2 614 aaKnown RBP4.64□□□□□ -1.67
CD55-208ENST00000476590 EMC10Q5UCC4 262 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 TTC39BQ5VTQ0 682 aaPredicted RBP4.64□□□□□ -1.67
CD55-208ENST00000476590 NAA16Q6N069 864 aaPredicted RBP4.64□□□□□ -1.67
CD55-208ENST00000476590 TBC1D9Q6ZT07 1266 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 NCCRP1Q6ZVX7 275 aaPredicted RBP4.64□□□□□ -1.67
CD55-208ENST00000476590 RSRC2Q7L4I2 434 aaKnown RBP4.64□□□□□ -1.67
CD55-208ENST00000476590 RSPH3Q86UC2 560 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.64□□□□□ -1.67
CD55-208ENST00000476590 ANKRD24Q8TF21 1146 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 PPP2R3CQ969Q6 453 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 SLC39A13Q96H72 371 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 UIMC1Q96RL1 719 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 IER2Q9BTL4 223 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 CARD6Q9BX69 1037 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 USP26Q9BXU7 913 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 OXCT2Q9BYC2 517 aaPredicted RBP4.64□□□□□ -1.67
CD55-208ENST00000476590 SLC7A5P2Q9GIP4 190 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 RSPH9Q9H1X1 276 aaPredicted RBP4.64□□□□□ -1.67
CD55-208ENST00000476590 TAOK3Q9H2K8 898 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 ACTR5Q9H9F9 607 aaPredicted RBP4.64□□□□□ -1.67
CD55-208ENST00000476590 EBF2Q9HAK2 575 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 RNF19AQ9NV58 838 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 TRMT1Q9NXH9 659 aaKnown RBP4.64□□□□□ -1.67
CD55-208ENST00000476590 GALNT8Q9NY28 637 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 DDX25Q9UHL0 483 aaKnown RBP4.64□□□□□ -1.67
CD55-208ENST00000476590 FMN1Q68DA7 1419 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 ANKRD50Q9ULJ7 1429 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 SAMD9Q5K651 1589 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 CFAP74Q9C0B2 1584 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 REREQ9P2R6 1566 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 KAT6BQ8WYB5 2073 aa4.64□□□□□ -1.67
CD55-208ENST00000476590 A0A1B0GVG6 124 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 GOLGA6L4A6NEF3 574 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 RASSF10A6NK89 507 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 A6NNZ2 444 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 BOLA2-SMG1P6H3BVE0 249 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 SCAMP3O14828 347 aaKnown RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 LSM1O15116 133 aaKnown RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 ATP9BO43861 1147 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 KDM1AO60341 852 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 GIGYF1O75420 1035 aaPredicted RBP4.63□□□□□ -1.67
CD55-208ENST00000476590 TMCC1O94876 653 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 CCDC166P0CW27 439 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 TROVE2P10155 538 aaKnown RBP eCLIP4.63□□□□□ -1.67
CD55-208ENST00000476590 PDHBP11177 359 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 ATP4AP20648 1035 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 TXLNAP40222 546 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 OXCT1P55809 520 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 UBE2HP62256 183 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 JAG1P78504 1218 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 CCZ1BP86790 482 aa4.63□□□□□ -1.67
CD55-208ENST00000476590 CCZ1P86791 482 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms