RNA–Protein interactions for RNA: ENST00000476467.1

PSMB4-204, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 2,067 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-204ENST00000476467 USP17L2Q6R6M4 530 aa15.39■□□□□ 0.05
PSMB4-204ENST00000476467 RASGRP2Q7LDG7 609 aa15.39■□□□□ 0.05
PSMB4-204ENST00000476467 CCDC144CPQ8IYA2 1237 aa15.39■□□□□ 0.05
PSMB4-204ENST00000476467 NECAB1Q8N987 351 aa15.39■□□□□ 0.05
PSMB4-204ENST00000476467 LPAR1Q92633 364 aa15.39■□□□□ 0.05
PSMB4-204ENST00000476467 WNK4Q96J92 1243 aa15.39■□□□□ 0.05
PSMB4-204ENST00000476467 RBM28Q9NW13 759 aaKnown RBP15.39■□□□□ 0.05
PSMB4-204ENST00000476467 LOC285556D6RIA3 1793 aa15.39■□□□□ 0.05
PSMB4-204ENST00000476467 CCDC196A0A1B0GTZ2 297 aa15.39■□□□□ 0.05
PSMB4-204ENST00000476467 CXCL11O14625 94 aa15.39■□□□□ 0.05
PSMB4-204ENST00000476467 IRF6O14896 467 aa15.39■□□□□ 0.05
PSMB4-204ENST00000476467 RAD21O60216 631 aa15.39■□□□□ 0.05
PSMB4-204ENST00000476467 PARP1P09874 1014 aaKnown RBP15.39■□□□□ 0.05
PSMB4-204ENST00000476467 GJA5P36382 358 aa15.39■□□□□ 0.05
PSMB4-204ENST00000476467 SCRN1Q12765 414 aa15.39■□□□□ 0.05
PSMB4-204ENST00000476467 SKOR2Q2VWA4 1001 aaPredicted RBP15.39■□□□□ 0.05
PSMB4-204ENST00000476467 ASPRV1Q53RT3 343 aa15.39■□□□□ 0.05
PSMB4-204ENST00000476467 SH3D19Q5HYK7 790 aa15.39■□□□□ 0.05
PSMB4-204ENST00000476467 CHMP4CQ96CF2 233 aa15.39■□□□□ 0.05
PSMB4-204ENST00000476467 C12orf42Q96LP6 360 aa15.39■□□□□ 0.05
PSMB4-204ENST00000476467 NCOA5Q9HCD5 579 aaKnown RBP15.39■□□□□ 0.05
PSMB4-204ENST00000476467 SLC1A4P43007 532 aa15.38■□□□□ 0.05
PSMB4-204ENST00000476467 ZNF543Q08ER8 600 aa15.38■□□□□ 0.05
PSMB4-204ENST00000476467 ST3GAL1Q11201 340 aa15.38■□□□□ 0.05
PSMB4-204ENST00000476467 CUL4AQ13619 759 aa15.38■□□□□ 0.05
PSMB4-204ENST00000476467 CCDC96Q2M329 555 aa15.38■□□□□ 0.05
PSMB4-204ENST00000476467 KIAA1755Q5JYT7 1200 aa15.38■□□□□ 0.05
PSMB4-204ENST00000476467 CCDC83Q8IWF9 413 aa15.38■□□□□ 0.05
PSMB4-204ENST00000476467 EMILIN3Q9NT22 766 aa15.38■□□□□ 0.05
PSMB4-204ENST00000476467 FAM217BQ9NTX9 383 aaPredicted RBP15.38■□□□□ 0.05
PSMB4-204ENST00000476467 PALM3A6NDB9 673 aaPredicted RBP15.37■□□□□ 0.05
PSMB4-204ENST00000476467 DHX16O60231 1041 aaKnown RBP15.37■□□□□ 0.05
PSMB4-204ENST00000476467 CDC27P30260 824 aa15.37■□□□□ 0.05
PSMB4-204ENST00000476467 HMGCS2P54868 508 aa15.37■□□□□ 0.05
PSMB4-204ENST00000476467 PKP1Q13835 747 aa15.37■□□□□ 0.05
PSMB4-204ENST00000476467 GPATCH4Q5T3I0 446 aaKnown RBP15.37■□□□□ 0.05
PSMB4-204ENST00000476467 SPICE1Q8N0Z3 855 aa15.37■□□□□ 0.05
PSMB4-204ENST00000476467 TMOD4Q9NZQ9 345 aa15.37■□□□□ 0.05
PSMB4-204ENST00000476467 MAD2L2Q9UI95 211 aa15.37■□□□□ 0.05
PSMB4-204ENST00000476467 ABT1Q9ULW3 272 aaKnown RBP15.37■□□□□ 0.05
PSMB4-204ENST00000476467 A0A0G2JLL6 359 aaPredicted RBP15.37■□□□□ 0.05
PSMB4-204ENST00000476467 GOLGA6L3A6NEY3 463 aa15.37■□□□□ 0.05
PSMB4-204ENST00000476467 WDR46O15213 610 aaKnown RBP15.37■□□□□ 0.05
PSMB4-204ENST00000476467 ZBTB48P10074 688 aaPredicted RBP15.37■□□□□ 0.05
PSMB4-204ENST00000476467 BMP3P12645 472 aa15.37■□□□□ 0.05
PSMB4-204ENST00000476467 GNAQP50148 359 aa15.37■□□□□ 0.05
PSMB4-204ENST00000476467 RGMBQ6NW40 437 aa15.37■□□□□ 0.05
PSMB4-204ENST00000476467 TMTC3Q6ZXV5 915 aa15.37■□□□□ 0.05
PSMB4-204ENST00000476467 PRRT2Q7Z6L0 340 aaPredicted RBP15.37■□□□□ 0.05
PSMB4-204ENST00000476467 HHIPL1Q96JK4 782 aa15.37■□□□□ 0.05
PSMB4-204ENST00000476467 GOLGA6L22H0YM25 854 aa15.36■□□□□ 0.05
PSMB4-204ENST00000476467 CPLX1O14810 134 aa15.36■□□□□ 0.05
PSMB4-204ENST00000476467 ADD1P35611 737 aaKnown RBP15.36■□□□□ 0.05
PSMB4-204ENST00000476467 APLP1P51693 650 aa15.36■□□□□ 0.05
PSMB4-204ENST00000476467 ZNF157P51786 506 aaPredicted RBP15.36■□□□□ 0.05
PSMB4-204ENST00000476467 SNAPC2Q13487 334 aa15.36■□□□□ 0.05
PSMB4-204ENST00000476467 SPRYD7Q5W111 196 aa15.36■□□□□ 0.05
PSMB4-204ENST00000476467 CPLX2Q6PUV4 134 aaKnown RBP15.36■□□□□ 0.05
PSMB4-204ENST00000476467 RASAL3Q86YV0 1011 aa15.36■□□□□ 0.05
PSMB4-204ENST00000476467 STAG2Q8N3U4 1231 aa15.36■□□□□ 0.05
PSMB4-204ENST00000476467 NUP88Q99567 741 aaPredicted RBP15.36■□□□□ 0.05
PSMB4-204ENST00000476467 FRMPD2Q68DX3 1309 aaPredicted RBP15.36■□□□□ 0.05
PSMB4-204ENST00000476467 GOLGA8HP0CJ92 632 aa15.36■□□□□ 0.05
PSMB4-204ENST00000476467 VCAM1P19320 739 aa15.36■□□□□ 0.05
PSMB4-204ENST00000476467 DGKZQ13574 1117 aa15.36■□□□□ 0.05
PSMB4-204ENST00000476467 FAM83BQ5T0W9 1011 aa15.36■□□□□ 0.05
PSMB4-204ENST00000476467 PROCA1Q8NCQ7 364 aaPredicted RBP15.36■□□□□ 0.05
PSMB4-204ENST00000476467 LZTS2Q9BRK4 669 aa15.36■□□□□ 0.05
PSMB4-204ENST00000476467 ISY1Q9ULR0 285 aaKnown RBP15.36■□□□□ 0.05
PSMB4-204ENST00000476467 ZDHHC9Q9Y397 364 aa15.36■□□□□ 0.05
PSMB4-204ENST00000476467 KLRF2D3W0D1 207 aa15.35■□□□□ 0.05
PSMB4-204ENST00000476467 PLEKHA8P1O95397 391 aa15.35■□□□□ 0.05
PSMB4-204ENST00000476467 KCTD1Q719H9 257 aa15.35■□□□□ 0.05
PSMB4-204ENST00000476467 LLPHQ9BRT6 129 aaKnown RBP15.35■□□□□ 0.05
PSMB4-204ENST00000476467 GPCPD1Q9NPB8 672 aa15.35■□□□□ 0.05
PSMB4-204ENST00000476467 CREBZFQ9NS37 354 aa15.35■□□□□ 0.05
PSMB4-204ENST00000476467 CDKL5O76039 1030 aa15.34■□□□□ 0.05
PSMB4-204ENST00000476467 SLC10A3P09131 477 aa15.34■□□□□ 0.05
PSMB4-204ENST00000476467 IFNAR1P17181 557 aa15.34■□□□□ 0.05
PSMB4-204ENST00000476467 GTF2A2P52657 109 aa15.34■□□□□ 0.05
PSMB4-204ENST00000476467 NTRK3Q16288 839 aa15.34■□□□□ 0.05
PSMB4-204ENST00000476467 INTS4Q96HW7 963 aaKnown RBP15.34■□□□□ 0.05
PSMB4-204ENST00000476467 CNTNAP5Q8WYK1 1306 aa15.34■□□□□ 0.05
PSMB4-204ENST00000476467 PLA2G6O60733 806 aa15.34■□□□□ 0.05
PSMB4-204ENST00000476467 SMARCA1P28370 1054 aa15.34■□□□□ 0.05
PSMB4-204ENST00000476467 SRBD1Q8N5C6 995 aaKnown RBP15.34■□□□□ 0.05
PSMB4-204ENST00000476467 SPZ1Q9BXG8 430 aa15.34■□□□□ 0.05
PSMB4-204ENST00000476467 RPAP3Q9H6T3 665 aaPredicted RBP15.34■□□□□ 0.05
PSMB4-204ENST00000476467 FEM1BQ9UK73 627 aa15.34■□□□□ 0.05
PSMB4-204ENST00000476467 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.34■□□□□ 0.05
PSMB4-204ENST00000476467 TMEM232C9JQI7 657 aa15.33■□□□□ 0.04
PSMB4-204ENST00000476467 CTDNEP1O95476 244 aa15.33■□□□□ 0.04
PSMB4-204ENST00000476467 CETPP11597 493 aa15.33■□□□□ 0.04
PSMB4-204ENST00000476467 FUT2Q10981 343 aa15.33■□□□□ 0.04
PSMB4-204ENST00000476467 MOGSQ13724 837 aa15.33■□□□□ 0.04
PSMB4-204ENST00000476467 TTBK2Q6IQ55 1244 aa15.33■□□□□ 0.04
PSMB4-204ENST00000476467 BTNL9Q6UXG8 535 aa15.33■□□□□ 0.04
PSMB4-204ENST00000476467 GADL1Q6ZQY3 521 aa15.33■□□□□ 0.04
PSMB4-204ENST00000476467 FASTKD5Q7L8L6 764 aaKnown RBP15.33■□□□□ 0.04
PSMB4-204ENST00000476467 FAM160B2Q86V87 743 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms