RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 MAATS1Q7Z4T9 603 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 SLC35F6Q8N357 371 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 KAT14Q9H8E8 782 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 ELP1O95163 1332 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 VCANP13611 3396 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 CTAGE15A4D2H0 777 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 CTAGE8P0CG41 777 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 TSPY3P0CV98 308 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 TSPY8P0CW00 308 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 SSR1P43307 286 aaKnown RBP5.62□□□□□ -1.51
CCDC39-204ENST00000476379 CDR1P51861 262 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 ETF1P62495 437 aaKnown RBP5.62□□□□□ -1.51
CCDC39-204ENST00000476379 MKRN3Q13064 507 aaKnown RBP5.62□□□□□ -1.51
CCDC39-204ENST00000476379 PTGDRQ13258 359 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 RASGRF1Q13972 1273 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 GRIK5Q16478 980 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 CTAGE6Q86UF2 777 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 CTAGE4Q8IX94 777 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 RDH13Q8NBN7 331 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 COPRSQ9NQ92 184 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 ZNF652Q9Y2D9 606 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 TRPM3Q9HCF6 1732 aaPredicted RBP5.62□□□□□ -1.51
CCDC39-204ENST00000476379 SYNRGQ9UMZ2 1314 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 TLDC2A0PJX2 215 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 AKR1B15C9JRZ8 316 aaPredicted RBP5.62□□□□□ -1.51
CCDC39-204ENST00000476379 CHMP2AO43633 222 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 N4BP1O75113 896 aaKnown RBP5.62□□□□□ -1.51
CCDC39-204ENST00000476379 GJC1P36383 396 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 NAPAP54920 295 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 HNRNPH2P55795 449 aaKnown RBP5.62□□□□□ -1.51
CCDC39-204ENST00000476379 CTSWP56202 376 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 ADCY1Q08828 1119 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 E2F4Q16254 413 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 AOC3Q16853 763 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 CCDC70Q6NSX1 233 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 SHC4Q6S5L8 630 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 LRP10Q7Z4F1 713 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 ZNF654Q8IZM8 581 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 MICALL1Q8N3F8 863 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 SLC39A2Q9NP94 309 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 HELLSQ9NRZ9 838 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 BIN2Q9UBW5 565 aaPredicted RBP5.62□□□□□ -1.51
CCDC39-204ENST00000476379 SAMM50Q9Y512 469 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 SLIT3O75094 1523 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 YEATS4O95619 227 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 PDIA4P13667 645 aaKnown RBP5.62□□□□□ -1.51
CCDC39-204ENST00000476379 IQCB1Q15051 598 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 CCDC40Q4G0X9 1142 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 CT47A1Q5JQC4 288 aaPredicted RBP5.62□□□□□ -1.51
CCDC39-204ENST00000476379 CCDC84Q86UT8 332 aaPredicted RBP5.62□□□□□ -1.51
CCDC39-204ENST00000476379 ANKRD18AQ8IVF6 992 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 ESR2Q92731 530 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 CCDC47Q96A33 483 aaKnown RBP5.62□□□□□ -1.51
CCDC39-204ENST00000476379 CAMKK2Q96RR4 588 aa5.62□□□□□ -1.51
CCDC39-204ENST00000476379 ESYT3A0FGR9 886 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 CLRN2A0PK11 232 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 CTAGE9A4FU28 777 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 USP17L3A6NCW0 530 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 USP17L4A6NCW7 530 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 EIF4E1BA6NMX2 242 aaKnown RBP5.61□□□□□ -1.51
CCDC39-204ENST00000476379 BUB1BO60566 1050 aaPredicted RBP5.61□□□□□ -1.51
CCDC39-204ENST00000476379 GTF2IP78347 998 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 CHRNDQ07001 517 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 SPA17Q15506 151 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 USP17L1Q7RTZ2 530 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 NOSTRINQ8IVI9 506 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 KLHL7Q8IXQ5 586 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 LRRC47Q8N1G4 583 aaKnown RBP5.61□□□□□ -1.51
CCDC39-204ENST00000476379 TGFBRAP1Q8WUH2 860 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 DACH1Q9UI36 760 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 RCOR1Q9UKL0 485 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 FAN1Q9Y2M0 1017 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 DLG5Q8TDM6 1919 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 CCNT1O60563 726 aaKnown RBP5.61□□□□□ -1.51
CCDC39-204ENST00000476379 ERLIN1O75477 346 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 TECP42680 631 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 UBXN2AP68543 259 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 CCZ1BP86790 482 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 CCZ1P86791 482 aaPredicted RBP5.61□□□□□ -1.51
CCDC39-204ENST00000476379 UTP14CQ5TAP6 766 aaKnown RBP5.61□□□□□ -1.51
CCDC39-204ENST00000476379 ATG9AQ7Z3C6 839 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 TMC4Q7Z404 712 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 PARD6BQ9BYG5 372 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 EHD2Q9NZN4 543 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 NARFQ9UHQ1 456 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 SALL3Q9BXA9 1300 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 ALS2Q96Q42 1657 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 B4DLN1 442 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 USP17L8P0C7I0 530 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 ANTXR2P58335 489 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 TFAP4Q01664 338 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 TBC1D8BQ0IIM8 1120 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 STIM1Q13586 685 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 RAPGEF1Q13905 1077 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 DCAF17Q5H9S7 520 aaPredicted RBP5.61□□□□□ -1.51
CCDC39-204ENST00000476379 SPECC1LQ69YQ0 1117 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 CLEC17AQ6ZS10 378 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 KRT26Q7Z3Y9 468 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 PLA2G4DQ86XP0 818 aa5.61□□□□□ -1.51
CCDC39-204ENST00000476379 FMR1NBQ8N0W7 255 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms