RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 LCE3BQ5TA77 95 aa7.72□□□□□ -1.17
PTCD3-211ENST00000476215 INTS3Q68E01 1043 aaKnown RBP7.72□□□□□ -1.17
PTCD3-211ENST00000476215 TAB3Q8N5C8 712 aaPredicted RBP7.72□□□□□ -1.17
PTCD3-211ENST00000476215 FAM168AQ92567 244 aa7.72□□□□□ -1.17
PTCD3-211ENST00000476215 CCDC120Q96HB5 630 aa7.72□□□□□ -1.17
PTCD3-211ENST00000476215 KREMEN1Q96MU8 473 aa7.72□□□□□ -1.17
PTCD3-211ENST00000476215 SLC9A7Q96T83 725 aa7.72□□□□□ -1.17
PTCD3-211ENST00000476215 PRKAG3Q9UGI9 489 aa7.72□□□□□ -1.17
PTCD3-211ENST00000476215 TNNI3KQ59H18 835 aa7.71□□□□□ -1.18
PTCD3-211ENST00000476215 TTC6Q86TZ1 520 aa7.71□□□□□ -1.18
PTCD3-211ENST00000476215 KRTAP1-3Q8IUG1 177 aa7.71□□□□□ -1.18
PTCD3-211ENST00000476215 ALPK1Q96QP1 1244 aa7.71□□□□□ -1.18
PTCD3-211ENST00000476215 TRIT1Q9H3H1 467 aaKnown RBP7.71□□□□□ -1.18
PTCD3-211ENST00000476215 ZSWIM5Q9P217 1185 aa7.71□□□□□ -1.18
PTCD3-211ENST00000476215 KCNH3Q9ULD8 1083 aa7.71□□□□□ -1.18
PTCD3-211ENST00000476215 R3HCC1Q9Y3T6 440 aaKnown RBP7.71□□□□□ -1.18
PTCD3-211ENST00000476215 UBOX5O94941 541 aa7.7□□□□□ -1.18
PTCD3-211ENST00000476215 UNC5AQ6ZN44 842 aa7.7□□□□□ -1.18
PTCD3-211ENST00000476215 ANKS3Q6ZW76 656 aa7.7□□□□□ -1.18
PTCD3-211ENST00000476215 TSPYL5Q86VY4 417 aaPredicted RBP7.7□□□□□ -1.18
PTCD3-211ENST00000476215 C19orf47Q8N9M1 422 aaKnown RBP7.7□□□□□ -1.18
PTCD3-211ENST00000476215 ARMC5Q96C12 935 aa7.7□□□□□ -1.18
PTCD3-211ENST00000476215 A0A1W2PQH9 124 aa7.69□□□□□ -1.18
PTCD3-211ENST00000476215 CCNFP41002 786 aa7.69□□□□□ -1.18
PTCD3-211ENST00000476215 AFMP43652 599 aa7.69□□□□□ -1.18
PTCD3-211ENST00000476215 ZYXQ15942 572 aaKnown RBP7.69□□□□□ -1.18
PTCD3-211ENST00000476215 ZSWIM9Q86XI8 627 aa7.69□□□□□ -1.18
PTCD3-211ENST00000476215 CKAP2LQ8IYA6 745 aa7.69□□□□□ -1.18
PTCD3-211ENST00000476215 UBXN4Q92575 508 aa7.69□□□□□ -1.18
PTCD3-211ENST00000476215 HIRIP3Q9BW71 556 aaPredicted RBP7.69□□□□□ -1.18
PTCD3-211ENST00000476215 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.69□□□□□ -1.18
PTCD3-211ENST00000476215 GPATCH2Q9NW75 528 aa7.69□□□□□ -1.18
PTCD3-211ENST00000476215 ACTR10Q9NZ32 417 aa7.69□□□□□ -1.18
PTCD3-211ENST00000476215 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.68□□□□□ -1.18
PTCD3-211ENST00000476215 CLEC3AO75596 197 aa7.68□□□□□ -1.18
PTCD3-211ENST00000476215 CASP7P55210 303 aa7.68□□□□□ -1.18
PTCD3-211ENST00000476215 HNRNPLLQ8WVV9 542 aaKnown RBP7.68□□□□□ -1.18
PTCD3-211ENST00000476215 DHRS1Q96LJ7 313 aa7.68□□□□□ -1.18
PTCD3-211ENST00000476215 SLC6A18Q96N87 628 aa7.68□□□□□ -1.18
PTCD3-211ENST00000476215 DNAJC2Q99543 621 aaKnown RBP7.68□□□□□ -1.18
PTCD3-211ENST00000476215 SLC12A7Q9Y666 1083 aa7.68□□□□□ -1.18
PTCD3-211ENST00000476215 ZNF503-AS2A6NEH8 195 aa7.67□□□□□ -1.18
PTCD3-211ENST00000476215 LRRN2O75325 713 aa7.67□□□□□ -1.18
PTCD3-211ENST00000476215 YBX3P16989 372 aaKnown RBP eCLIP7.67□□□□□ -1.18
PTCD3-211ENST00000476215 TPP2P29144 1249 aaPredicted RBP7.67□□□□□ -1.18
PTCD3-211ENST00000476215 LARP1BQ659C4 914 aaKnown RBP7.67□□□□□ -1.18
PTCD3-211ENST00000476215 TMEM192Q8IY95 271 aa7.67□□□□□ -1.18
PTCD3-211ENST00000476215 ZNF281Q9Y2X9 895 aa7.67□□□□□ -1.18
PTCD3-211ENST00000476215 WASH4PA8MWX3 477 aa7.66□□□□□ -1.18
PTCD3-211ENST00000476215 RNF4P78317 190 aa7.66□□□□□ -1.18
PTCD3-211ENST00000476215 FYB2Q5VWT5 728 aa7.66□□□□□ -1.18
PTCD3-211ENST00000476215 ENOX1Q8TC92 643 aaKnown RBP7.66□□□□□ -1.18
PTCD3-211ENST00000476215 ZNF512BQ96KM6 892 aaPredicted RBP7.66□□□□□ -1.18
PTCD3-211ENST00000476215 TRIM55Q9BYV6 548 aa7.66□□□□□ -1.18
PTCD3-211ENST00000476215 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.66□□□□□ -1.18
PTCD3-211ENST00000476215 TMEM59LQ9UK28 342 aa7.66□□□□□ -1.18
PTCD3-211ENST00000476215 LTBP3Q9NS15 1303 aa7.66□□□□□ -1.18
PTCD3-211ENST00000476215 HPXP02790 462 aa7.65□□□□□ -1.18
PTCD3-211ENST00000476215 GLI1P08151 1106 aa7.65□□□□□ -1.18
PTCD3-211ENST00000476215 RBL2Q08999 1139 aa7.65□□□□□ -1.18
PTCD3-211ENST00000476215 KCNMB1Q16558 191 aa7.65□□□□□ -1.18
PTCD3-211ENST00000476215 PMFBP1Q8TBY8 1022 aa7.65□□□□□ -1.18
PTCD3-211ENST00000476215 PHAXQ9H814 394 aaKnown RBP7.65□□□□□ -1.18
PTCD3-211ENST00000476215 SP110Q9HB58 689 aa7.65□□□□□ -1.18
PTCD3-211ENST00000476215 FAM53CQ9NYF3 392 aa7.65□□□□□ -1.18
PTCD3-211ENST00000476215 SUCOQ9UBS9 1254 aaKnown RBP7.65□□□□□ -1.18
PTCD3-211ENST00000476215 DUSP13Q9UII6 198 aa7.65□□□□□ -1.18
PTCD3-211ENST00000476215 PCDHB10Q9UN67 800 aa7.65□□□□□ -1.18
PTCD3-211ENST00000476215 DNAJC25-GNG10A0A024R161 153 aa7.64□□□□□ -1.19
PTCD3-211ENST00000476215 KLF4O43474 513 aa7.64□□□□□ -1.19
PTCD3-211ENST00000476215 PMS1P54277 932 aaKnown RBP7.64□□□□□ -1.19
PTCD3-211ENST00000476215 GNPTABQ3T906 1256 aa7.64□□□□□ -1.19
PTCD3-211ENST00000476215 RALGPS1Q5JS13 557 aa7.64□□□□□ -1.19
PTCD3-211ENST00000476215 NBPF12Q5TAG4 269 aaPredicted RBP7.64□□□□□ -1.19
PTCD3-211ENST00000476215 TDRD10Q5VZ19 366 aaKnown RBP7.64□□□□□ -1.19
PTCD3-211ENST00000476215 CREG2Q8IUH2 290 aa7.64□□□□□ -1.19
PTCD3-211ENST00000476215 SYTL5Q8TDW5 730 aaPredicted RBP7.64□□□□□ -1.19
PTCD3-211ENST00000476215 KIRREL1Q96J84 757 aa7.64□□□□□ -1.19
PTCD3-211ENST00000476215 MKRN2Q9H000 416 aaKnown RBP7.64□□□□□ -1.19
PTCD3-211ENST00000476215 FAM86C1Q9NVL1 165 aa7.64□□□□□ -1.19
PTCD3-211ENST00000476215 SLAMF8Q9P0V8 285 aa7.64□□□□□ -1.19
PTCD3-211ENST00000476215 ZNF214Q9UL59 606 aaPredicted RBP7.64□□□□□ -1.19
PTCD3-211ENST00000476215 SHISA3A0PJX4 238 aa7.63□□□□□ -1.19
PTCD3-211ENST00000476215 U2SURPO15042 1029 aaKnown RBP7.63□□□□□ -1.19
PTCD3-211ENST00000476215 TP53P04637 393 aaPredicted RBP7.63□□□□□ -1.19
PTCD3-211ENST00000476215 C8AP07357 584 aa7.63□□□□□ -1.19
PTCD3-211ENST00000476215 MESP2Q0VG99 397 aa7.63□□□□□ -1.19
PTCD3-211ENST00000476215 RAB33AQ14088 237 aa7.63□□□□□ -1.19
PTCD3-211ENST00000476215 FXNQ16595 210 aa7.63□□□□□ -1.19
PTCD3-211ENST00000476215 BBS9Q3SYG4 887 aa7.63□□□□□ -1.19
PTCD3-211ENST00000476215 SOGA3Q5TF21 947 aa7.63□□□□□ -1.19
PTCD3-211ENST00000476215 VHLLQ6RSH7 139 aa7.63□□□□□ -1.19
PTCD3-211ENST00000476215 BHLHE22Q8NFJ8 381 aaPredicted RBP7.63□□□□□ -1.19
PTCD3-211ENST00000476215 HDAC8Q9BY41 377 aa7.63□□□□□ -1.19
PTCD3-211ENST00000476215 ST7Q9NRC1 585 aa7.63□□□□□ -1.19
PTCD3-211ENST00000476215 C9IYK1 514 aa7.62□□□□□ -1.19
PTCD3-211ENST00000476215 DDAH1O94760 285 aa7.62□□□□□ -1.19
PTCD3-211ENST00000476215 ZGLP1P0C6A0 271 aa7.62□□□□□ -1.19
PTCD3-211ENST00000476215 SLC7A5Q01650 507 aa7.62□□□□□ -1.19
PTCD3-211ENST00000476215 TEKQ02763 1124 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms